Experiment set7IT032 for Herbaspirillum seropedicae SmR1

Compare to:

L-Malic acid carbon source with ammonium chloride; anaerobic; 8 days

Genes with specific phenotypes:

  gene name fitness t score description  
HSERO_RS15790 -4.0 -11.6 chemotaxis protein compare
HSERO_RS21210 -3.8 -18.4 membrane protein compare
HSERO_RS11405 -3.6 -9.8 transcriptional regulator compare
HSERO_RS21195 -3.4 -13.9 hypothetical protein compare
HSERO_RS21220 -3.3 -20.2 hypothetical protein compare
HSERO_RS21225 -3.2 -15.5 hypothetical protein compare
HSERO_RS04295 -2.7 -11.2 diguanylate cyclase compare
HSERO_RS08185 -2.7 -10.2 sulfate transporter subunit compare
HSERO_RS02615 -2.7 -13.7 polymerase compare
HSERO_RS10155 -2.5 -5.6 antiactivator of flagellar biosynthesis FleN protein compare
HSERO_RS07130 -2.3 -7.7 hypothetical protein compare
HSERO_RS01920 -1.8 -5.5 50S ribosomal protein L11 methyltransferase compare
HSERO_RS16560 -1.6 -10.2 2-hydroxyacid dehydrogenase compare
HSERO_RS01300 -1.5 -6.4 phosphate acetyltransferase compare
HSERO_RS21395 -1.5 -7.6 histone acetyltransferase compare
HSERO_RS20340 -1.4 -8.1 DNA methylase N-4 compare
HSERO_RS21415 -1.4 -8.4 lytic transglycosylase compare
HSERO_RS08175 -1.3 -8.5 D-alanyl-D-alanine carboxypeptidase compare
HSERO_RS18605 -1.3 -8.0 histidine kinase compare
HSERO_RS10615 -1.2 -5.6 transcription elongation factor GreB compare
HSERO_RS01520 +1.1 10.1 hemagglutinin compare
HSERO_RS11235 +1.1 8.2 branched-chain amino acid ABC transporter substrate-binding protein compare
HSERO_RS18720 +1.2 8.6 transcriptional regulator compare
HSERO_RS15140 +1.3 5.3 chemotaxis protein CheY compare
HSERO_RS20865 +1.3 8.5 ABC transporter permease compare
HSERO_RS04950 +1.3 7.0 deacetylase compare
HSERO_RS01490 +1.4 9.8 guanylate cyclase compare
HSERO_RS01535 +1.5 9.7 phosphohydrolase with GAF sensor compare
HSERO_RS08150 +1.5 6.8 phasin family protein compare
HSERO_RS14680 +1.6 6.5 histidine kinase compare
HSERO_RS21125 +1.7 12.2 malate:quinone oxidoreductase compare
HSERO_RS23505 +1.9 14.4 transcriptional regulator compare
HSERO_RS12860 +2.1 14.1 histidine kinase compare
HSERO_RS12850 +2.1 11.4 LuxR family transcriptional regulator compare
HSERO_RS04290 +2.4 7.8 DNA-binding protein compare
HSERO_RS20810 +2.5 12.9 amidophosphoribosyltransferase compare
HSERO_RS13620 +2.6 14.2 diguanylate cyclase compare
HSERO_RS12395 +3.8 9.3 TetR family transcriptional regulator compare
HSERO_RS13930 +4.1 31.5 competence protein ComEC compare
HSERO_RS13935 +4.1 11.2 DNAase compare


Specific phenotypes for nitrogen fixation control L-Malic acid across organisms