Experiment set7IT032 for Desulfovibrio vulgaris Hildenborough JW710

Compare to:

Pyruvate-Sulfite (60-20mM) with Aluminum 1mM

200 most detrimental genes:

  gene name fitness t score description  
DVU1726 +1.6 2.8 hypothetical protein (TIGR) compare
DVU2915 +1.3 2.1 hypothetical protein (TIGR) compare
DVU3177 +1.2 2.4 hypothetical protein (TIGR) compare
DVU0436 +1.0 1.1 transcriptional regulator, TetR family (TIGR) compare
DVU2867 +1.0 1.4 holin (TIGR) compare
DVU1682 +1.0 3.1 GAF domain protein (TIGR) compare
DVU1696 +1.0 2.3 hypothetical protein (TIGR) compare
DVU1142 +0.9 1.5 transcriptional regulator, putative (TIGR) compare
DVU1360 galE +0.9 0.7 UDP-glucose 4-epimerase (TIGR) compare
DVU0376 +0.9 1.6 hypothetical protein (TIGR) compare
DVU0250 +0.8 4.4 hypothetical protein (TIGR) compare
DVU0359 +0.8 2.2 HesB-like domain (TIGR) compare
DVU3022 +0.8 0.4 sensory box histidine kinase/response regulator (TIGR) compare
DVU3295 +0.8 1.6 hemolysin III (TIGR) compare
DVU1520 +0.8 0.6 hypothetical protein (TIGR) compare
DVU3289 +0.7 2.0 hypothetical protein (TIGR) compare
DVU3109 +0.7 1.6 iron-sulfur cluster-binding protein (TIGR) compare
DVU0859 +0.7 5.1 hypothetical protein (TIGR) compare
DVU2863 +0.7 0.7 hypothetical protein (TIGR) compare
DORF38058 +0.7 0.7 SEED: FIG00604017: hypothetical protein compare
DVU1550 +0.7 3.5 phosphoglycerate mutase family protein (TIGR) compare
DVU2676 +0.7 2.1 hypothetical protein (TIGR) compare
DVU0740 +0.7 4.4 membrane protein, putative (TIGR) compare
DVU1797 ksgA +0.7 2.8 dimethyladenosine transferase (TIGR) compare
DVU0773 +0.7 1.0 hypothetical protein (TIGR) compare
DVU1531 +0.7 2.8 methyltransferase, putative (TIGR) compare
DVU0974 +0.6 2.6 hypothetical protein (TIGR) compare
DVU1110 +0.6 1.8 hypothetical protein (TIGR) compare
DVU1429 +0.6 0.5 GTP-binding protein (TIGR) compare
DVU3020 +0.6 1.5 hypothetical protein (TIGR) compare
DVU0034 +0.6 2.4 DSBA-like thioredoxin domain protein (TIGR) compare
DVU0478 +0.6 2.3 Ser/Thr protein phosphatase family (TIGR) compare
DORF12467 +0.6 1.2 SEED: protein of unknown function DUF497 compare
DVU2132 +0.6 2.5 hypothetical protein (TIGR) compare
DVU2287 +0.6 0.5 hydrogenase, CooK subunit, selenocysteine-containing, putative (TIGR) compare
DVU0898 +0.6 3.3 conserved hypothetical protein (TIGR) compare
DVU0251 +0.6 4.1 membrane protein, putative (TIGR) compare
DVU2831 +0.6 1.2 hypothetical protein (TIGR) compare
DVU2761 +0.6 0.4 hypothetical protein (TIGR) compare
DVU0595 +0.6 2.3 conserved hypothetical protein (TIGR) compare
DVU1338 +0.6 1.7 conserved hypothetical protein (TIGR) compare
DVU1285 +0.6 1.2 response regulator (TIGR) compare
DVU0703 lepA +0.6 0.8 GTP-binding protein LepA (TIGR) compare
DVU1787 +0.6 1.5 nuclease domain protein (TIGR) compare
DVU3325 +0.6 1.5 hypothetical protein (TIGR) compare
DVU1464 +0.6 3.7 heptosyltransferase family protein (TIGR) compare
DVU1193 radC +0.6 1.9 DNA repair protein RadC (TIGR) compare
DVU2351 +0.6 1.0 hypothetical protein (TIGR) compare
DVU1349 SelGGPS +0.6 0.9 geranylgeranyl diphosphate synthase (TIGR) compare
DVU2115 +0.5 0.8 hypothetical protein (TIGR) compare
DVU2577 +0.5 1.7 DNA-binding response regulator, LuxR family (TIGR) compare
DVU2498 +0.5 1.6 hypothetical protein (TIGR) compare
DVU0842 +0.5 2.2 hypothetical protein (TIGR) compare
DVU3175 +0.5 0.8 membrane protein, putative (TIGR) compare
DVU1045 +0.5 2.9 hypothetical protein (TIGR) compare
DVU0201 +0.5 1.4 hypothetical protein (TIGR) compare
DVU2578 +0.5 3.0 response regulator (TIGR) compare
DVU3322 +0.5 1.5 conserved domain protein (TIGR) compare
DVU1264 +0.5 1.8 transglycosylase SLT domain protein (TIGR) compare
DVU0303 +0.5 1.6 hypothetical protein (TIGR) compare
DVU0108 +0.5 0.5 hypothetical protein (TIGR) compare
DVU3312 +0.5 1.1 conserved hypothetical protein (TIGR) compare
DVU1078 +0.5 2.7 R3H domain protein (TIGR) compare
DVU1471 hspC +0.5 1.7 heat shock protein, Hsp20 family (TIGR) compare
DVU2592 +0.5 2.0 hypothetical protein (TIGR) compare
DVU2965 +0.5 1.6 hypothetical protein (TIGR) compare
DVU1621 +0.5 0.7 hypothetical protein (TIGR) compare
DVU0024 +0.5 0.6 conserved hypothetical protein (TIGR) compare
DVU0939 +0.5 3.1 conserved hypothetical protein (TIGR) compare
DVU0302 +0.5 3.1 chemotaxis protein CheX, putative (TIGR) compare
DVU1210 +0.5 0.2 conserved hypothetical protein (TIGR) compare
DVU2669 +0.5 1.1 conserved domain protein (TIGR) compare
DVU0973 +0.5 0.2 4-hydroxybenzoate octaprenyltransferase, putative (TIGR) compare
DVU2251 +0.5 2.7 DNA-binding protein (TIGR) compare
DVU0758 +0.5 1.8 hypothetical protein (TIGR) compare
DVU3277 +0.5 0.4 hypothetical protein (TIGR) compare
DVU0755 +0.5 2.0 sensor histidine kinase, putative (TIGR) compare
DVU2971 +0.5 2.7 glycosyl transferase, family 8 (TIGR) compare
DVU3299 +0.5 1.3 membrane protein, putative (TIGR) compare
DVU1247 +0.5 1.8 hypothetical protein (TIGR) compare
DVU3063 mviN-2 +0.5 2.8 integral membrane protein MviN (TIGR) compare
DVU1540 purU +0.5 1.9 formyltetrahydrofolate deformylase (TIGR) compare
DVU1418 hydH +0.5 3.1 sensory box histidine kinase (TIGR) compare
DVU1604 +0.5 1.8 hypothetical protein (TIGR) compare
DVUA0116 +0.5 1.6 conserved hypothetical protein (TIGR) compare
DVU2362 thiE-2 +0.5 1.6 thiamine-phosphate pyrophosphorylase (TIGR) compare
DVU0512 flgF +0.5 2.3 flagellar basal-body rod protein, putative (TIGR) compare
DVU0934 +0.5 1.4 hypothetical protein (TIGR) compare
DVU2138 +0.5 1.3 conserved hypothetical protein (TIGR) compare
DVU1449 +0.5 2.3 anti-anti-sigma factor, putative (TIGR) compare
DVUA0030 +0.5 2.2 hypothetical protein (TIGR) compare
DVU0534 hmcC +0.4 2.1 HmcC, 43.2 kd protein in hmc operon (voordouw) compare
DVU0624 nrfH +0.4 2.0 NapC/NirT cytochrome c family protein (TIGR) compare
DVU0544 +0.4 2.9 hypothetical protein (TIGR) compare
DVU2283 +0.4 0.9 hypothetical protein (TIGR) compare
DORF10446 +0.4 2.0 SEED: FIG00604570: hypothetical protein compare
DVU1192 acyP +0.4 1.8 acylphosphatase (TIGR) compare
DVU0691 +0.4 1.9 membrane protein, putative (TIGR) compare
DVU2736 +0.4 1.6 hypothetical protein (TIGR) compare
DVU2203 +0.4 1.0 endoribonuclease, L-PSP family (TIGR) compare
DORF45537 +0.4 1.8 no description compare
DVU0547 +0.4 2.5 high-affinity branched chain amino acid ABC transporter, periplasmic branched chain amino acid-binding protein (TIGR) compare
DVU1363 rfbD +0.4 1.5 dTDP-4-dehydrorhamnose reductase (TIGR) compare
DVU1420 +0.4 0.5 Hpt domain protein (TIGR) compare
DVU1431 +0.4 2.4 hpt domain protein/STAS domain protein (TIGR) compare
DVU1085 phoU +0.4 1.9 phosphate transport system protein PhoU (TIGR) compare
DVU2074 +0.4 1.1 chemotaxis protein CheW (TIGR) compare
DVU2510 +0.4 0.2 penicillin-binding protein (TIGR) compare
DVU1526 +0.4 0.8 hypothetical protein (TIGR) compare
DVU2099 cooC-2 +0.4 2.0 carbon monoxide dehydrogenase accessory protein CooC, putative (TIGR) compare
DVU1857 +0.4 2.8 methyl-accepting chemotaxis protein (TIGR) compare
DVU1067 +0.4 1.7 membrane protein, Bmp family (TIGR) compare
DVU0378 +0.4 1.1 thioredoxin, putative (TIGR) compare
DVU2657 +0.4 0.6 6-pyruvoyl tetrahydrobiopterin synthase, putative (TIGR) compare
DVU0379 +0.4 1.2 transcriptional regulator, putative (TIGR) compare
DVU1103 +0.4 1.9 baseplate assembly protein, putative (TIGR) compare
DVU0970 +0.4 1.4 lipoprotein, putative (TIGR) compare
DVU2524 +0.4 1.3 cytochrome c3, putative (TIGR) compare
DVU1955 +0.4 2.3 TPR domain protein (TIGR) compare
DORF37657 +0.4 0.5 SEED: Magnesium and cobalt efflux protein CorC compare
DVU2151 +0.4 2.0 conserved hypothetical protein (TIGR) compare
DVU1996 +0.4 0.8 quaternary ammonium compound-resistance protein QacC, putative (TIGR) compare
DVUA0006 mgtE +0.4 1.5 magnesium transporter MgtE, putative (TIGR) compare
DVU_tRNA-Leu-4 tRNA-Leu +0.4 0.8 tRNA with anticodon GAG for Leu (VIMSS-AUTO) compare
DVU2742 livM +0.4 2.1 high-affinity branched chain amino acid ABC transporter, permease protein (TIGR) compare
DVU1936 phnC +0.4 1.5 phosphonate ABC transporter, ATP-binding protein (TIGR) compare
DVU1337 lon +0.4 2.5 ATP-dependent protease La (TIGR) compare
DVU1430 +0.4 2.9 peptidase, M16 family (TIGR) compare
DVU2250 +0.4 2.3 AMP-binding protein (TIGR) compare
DVU2682 +0.4 1.2 DedA family protein (TIGR) compare
DVU1462 +0.4 0.7 cytochrome c assembly protein, putative (TIGR) compare
DVU1033 cinA +0.4 0.3 competence/damage-inducible protein CinA protein, truncation (TIGR) compare
DORF1985 +0.4 2.3 no description compare
DVU2609 +0.4 1.7 chemotaxis MotB protein, putative (TIGR) compare
DVU0200 +0.4 0.6 major head protein (TIGR) compare
DVU2213 +0.4 2.1 nuclease domain protein (TIGR) compare
DVU1937 +0.4 2.0 phosphonate ABC transporter, periplasmic phosphonate-binding protein, putative (TIGR) compare
DVU0387 +0.4 2.2 amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) compare
DVU2391 +0.4 0.2 hypothetical protein (TIGR) compare
DVU3134 glpK +0.4 2.0 glycerol kinase (TIGR) compare
DORF41147 +0.4 0.4 no description compare
DVU2583 +0.4 1.4 lipoprotein, putative (TIGR) compare
DVU0923 +0.4 1.3 endoribonuclease, L-PSP family (TIGR) compare
DVU1599 crcB +0.4 1.3 crcB protein (TIGR) compare
DVU1736 +0.4 2.1 hypothetical protein (TIGR) compare
DVU2339 prmA +0.4 2.0 ribosomal protein L11 methyltransferase, putative (TIGR) compare
DVU0833 +0.4 1.2 conserved hypothetical protein TIGR00252 (TIGR) compare
DORF7824 +0.4 1.1 SEED: FIG00603141: hypothetical protein compare
DVU0764 hup-2 +0.4 1.3 DNA-binding protein HU (TIGR) compare
DVU3049 +0.4 1.5 hemerythrin family protein (TIGR) compare
DVU0197 +0.4 2.0 phage portal protein, lambda family (TIGR) compare
DVU2569 slyD +0.4 1.0 peptidyl-prolyl cis-trans isomerase, FKBP-type (TIGR) compare
DVU2852 +0.4 1.5 tail protein, putative (TIGR) compare
DORF13021 +0.4 0.6 no description compare
DVU1542 +0.4 1.5 hypothetical protein (TIGR) compare
DVU2871 +0.4 2.5 minor capsid protein C (TIGR) compare
DVU2165 +0.4 1.5 lysozyme, putative (TIGR) compare
DVU1851 +0.4 1.8 peptidase, M23/M37 family (TIGR) compare
DVU1268 +0.4 1.5 hypothetical protein (TIGR) compare
DVU3027 glcD +0.4 1.1 glycolate oxidase, subunit GlcD (TIGR) compare
DVU2562 acpP +0.4 2.1 acyl carrier protein (TIGR) compare
DVU0628 buk +0.4 1.6 butyrate kinase (TIGR) compare
DVU0561 +0.4 0.7 glycosyl transferase, group 1 family protein (TIGR) compare
DVU1137 +0.4 0.7 hypothetical protein (TIGR) compare
DVU2843 vsr +0.4 1.3 DNA mismatch endonuclease Vsr, putative (TIGR) compare
DORF19323 +0.4 0.9 no description compare
DVU2060 +0.4 0.8 hypothetical protein (TIGR) compare
DVU2307 +0.4 0.8 C4-type zinc finger protein, DksA/TraR family (TIGR) compare
DVU1023 +0.4 1.4 rhomboid family protein (TIGR) compare
DVU1263 pppA +0.4 0.8 type IV prepilin-like proteins leader peptidase (TIGR) compare
DVUA0013 glnB-2 +0.4 0.8 nitrogen regulatory protein P-II (TIGR) compare
DORF8571 +0.4 0.6 SEED: FIG00603598: hypothetical protein compare
DVU0386 glnH +0.4 1.2 amino acid ABC transporter, periplasmic amino acid-binding protein (TIGR) compare
DVU1842 +0.4 0.4 lipoprotein, putative (TIGR) compare
DVU1967 rrf2 +0.4 1.8 transcriptional regulator, rrf2 protein, putative (TIGR) compare
DORF768 +0.4 1.1 no description compare
DVU3363 sun +0.4 2.7 sun protein (TIGR) compare
DORF37060 +0.4 1.1 no description compare
DVU0499 +0.4 1.0 conserved hypothetical protein TIGR00149 (TIGR) compare
DVU1742 +0.4 1.6 prevent-host-death family protein (TIGR) compare
DVU1943 +0.4 0.8 hypothetical protein (TIGR) compare
DVU2067 +0.4 1.1 GGDEF domain protein (TIGR) compare
DVU0008 +0.4 0.2 hypothetical protein (TIGR) compare
DVU2438 +0.4 2.1 ABC transporter, ATP-binding protein, authentic frameshift (TIGR) compare
DORF25047 +0.4 1.5 no description compare
DVU1276 +0.4 2.3 hypothetical protein (TIGR) compare
DVU1939 +0.4 1.6 anaerobic glycerol-3-phosphate dehydrogenase, B subunit, putative (TIGR) compare
DVU2963 +0.3 0.9 response regulator (TIGR) compare
DVU1126 +0.3 0.9 lipoprotein, putative (TIGR) compare
DVU3229 fliA +0.3 1.2 RNA polymerase sigma factor for flagellar operon FliA (TIGR) compare
DVU1702 +0.3 1.1 conserved hypothetical protein (TIGR) compare
DORF26459 +0.3 1.0 no description compare
DVU1862 +0.3 1.2 GGDEF domain protein (TIGR) compare
DVU2378 foxR +0.3 1.3 transcriptional regulator, AraC family (TIGR) compare
DVU3254 +0.3 2.0 PDZ domain protein (TIGR) compare
DVU0320 +0.3 1.3 conserved hypothetical protein (TIGR) compare
DVU0669 +0.3 0.9 hypothetical protein (TIGR) compare
DVU1088 +0.3 0.7 hypothetical protein (TIGR) compare
DVU1935 phnE +0.3 1.8 phosphonate ABC transporter, permease protein (TIGR) compare
DORF9585 +0.3 0.4 no description compare


Specific Phenotypes

For 1 genes in this experiment

For stress Sodium pyruvate in Desulfovibrio vulgaris Hildenborough JW710

For stress Sodium pyruvate across organisms