Experiment set7IT031 for Methanococcus maripaludis S2

Compare to:

control, 1x iron with casamino acids and vitamins, H2 media

200 most detrimental genes:

  gene name fitness t score description  
MMP_RS08785 +1.4 1.9 RNA-protein complex protein Nop10 compare
MMP_RS00395 +1.3 2.7 MGMT family protein compare
MMP_RS08580 +1.2 1.5 flagellin compare
MMP_RS08850 +1.1 8.2 hypothetical protein compare
MMP_RS03340 +1.1 1.1 ABC transporter ATP-binding protein compare
MMP_RS00450 +1.1 2.4 4Fe-4S binding protein compare
MMP_RS07815 +1.0 1.7 DUF2120 domain-containing protein compare
MMP_RS08845 +0.9 4.5 archaellum operon transcriptional activator EarA family protein compare
MMP_RS07890 +0.9 2.9 OB-fold nucleic acid binding domain-containing protein compare
MMP_RS04145 +0.9 2.0 hypothetical protein compare
MMP_RS00655 +0.8 2.6 hypothetical protein compare
MMP_RS08280 +0.8 2.4 proteasome assembly chaperone family protein compare
MMP_RS07095 +0.8 3.2 PspC domain-containing protein compare
MMP_RS07770 +0.8 3.6 alanine racemase compare
MMP_RS08725 +0.8 0.6 Ni/Fe hydrogenase subunit alpha compare
MMP_RS08455 +0.7 3.0 multiprotein bridging factor aMBF1 compare
MMP_RS01945 +0.7 3.1 DUF4350 domain-containing protein compare
MMP_RS06300 +0.7 2.9 ABC transporter substrate-binding protein compare
MMP_RS02290 +0.7 3.0 MBL fold metallo-hydrolase compare
MMP_RS00950 +0.7 4.1 site-2 protease family protein compare
MMP_RS07350 +0.7 1.7 preprotein translocase subunit Sec61beta compare
MMP_RS08670 +0.7 3.7 metallophosphoesterase compare
MMP_RS07925 +0.7 3.3 haloacid dehalogenase compare
MMP_RS06540 +0.6 1.4 3-methyl-2-oxobutanoate dehydrogenase subunit VorB compare
MMP_RS07915 +0.6 3.3 DUF4870 domain-containing protein compare
MMP_RS00185 +0.6 4.5 potassium channel protein compare
MMP_RS08430 +0.6 3.4 HAD family hydrolase compare
MMP_RS08310 +0.6 1.5 TMEM165/GDT1 family protein compare
MMP_RS00155 +0.6 3.6 heavy metal-binding domain-containing protein compare
MMP_RS07900 +0.6 1.7 YeeE/YedE family protein compare
MMP_RS00980 +0.6 3.3 hypothetical protein compare
MMP_RS08500 +0.6 2.4 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMP_RS01630 +0.6 4.0 N-glycosylase/DNA lyase compare
MMP_RS05695 +0.5 2.9 phospholipase D-like domain-containing protein compare
MMP_RS01635 +0.5 3.7 thiamine pyrophosphate-dependent enzyme compare
MMP_RS08380 +0.5 2.6 phosphatase PAP2 family protein compare
MMP_RS06575 +0.5 2.2 fluoride efflux transporter CrcB compare
MMP_RS07775 +0.5 3.3 alanine dehydrogenase compare
MMP_RS06965 +0.5 2.6 TIGR04014 family B12-binding domain/radical SAM domain-containing protein compare
MMP_RS01620 +0.5 2.3 hypothetical protein compare
MMP_RS08285 +0.5 3.1 serine/threonine protein kinase compare
MMP_RS03965 +0.5 1.4 hypothetical protein compare
MMP_RS06585 +0.5 1.2 DMT family protein compare
MMP_RS07985 +0.5 3.6 nitroreductase family protein compare
MMP_RS08480 +0.5 3.1 molybdate ABC transporter substrate-binding protein compare
MMP_RS04945 +0.5 1.3 hypothetical protein compare
MMP_RS03895 +0.5 1.1 hypothetical protein compare
MMP_RS08640 +0.5 3.5 TIM barrel protein compare
MMP_RS00290 +0.5 3.1 hypothetical protein compare
MMP_RS01950 +0.5 2.1 hypothetical protein compare
MMP_RS01640 +0.5 2.5 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMP_RS02815 +0.5 1.5 hypothetical protein compare
MMP_RS06710 +0.5 2.7 selenium-binding protein compare
MMP_RS01570 +0.4 0.9 hypothetical protein compare
MMP_RS07840 +0.4 1.5 ribonuclease III compare
MMP_RS06515 +0.4 1.0 UPF0489 family protein compare
MMP_RS08485 +0.4 2.4 tungstate ABC transporter substrate-binding protein WtpA compare
MMP_RS06280 +0.4 2.4 alpha-glucan family phosphorylase compare
MMP_RS06015 +0.4 2.2 flavodoxin family protein compare
MMP_RS08175 +0.4 2.0 7-cyano-7-deazaguanine synthase compare
MMP_RS08160 +0.4 2.1 EamA family transporter compare
MMP_RS08775 +0.4 2.4 methanogenesis marker 9 domain-containing protein compare
MMP_RS07550 +0.4 2.5 L-serine ammonia-lyase iron-sulfur-dependent subunit alpha compare
MMP_RS00085 +0.4 3.3 DNA cytosine methyltransferase compare
MMP_RS06870 +0.4 0.9 DedA family protein compare
MMP_RS08390 +0.4 2.2 DUF5400 domain-containing protein compare
MMP_RS08405 +0.4 2.7 MFS transporter compare
MMP_RS08410 +0.4 2.0 DUF169 domain-containing protein compare
MMP_RS07835 +0.4 1.2 TldD/PmbA family protein compare
MMP_RS06655 +0.4 2.4 glycoside hydrolase family 15 protein compare
MMP_RS01685 +0.4 1.3 indolepyruvate oxidoreductase subunit beta compare
MMP_RS08085 +0.4 2.8 hypothetical protein compare
MMP_RS05365 +0.4 1.3 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
MMP_RS08245 +0.4 2.1 DUF4013 domain-containing protein compare
MMP_RS04740 +0.4 1.1 DUF473 domain-containing protein compare
MMP_RS08260 +0.4 1.9 DUF99 family protein compare
MMP_RS02675 +0.4 0.5 hypothetical protein compare
MMP_RS00235 +0.4 2.6 HDIG domain-containing protein compare
MMP_RS00990 +0.4 1.2 hypothetical protein compare
MMP_RS08555 +0.4 1.4 hypothetical protein compare
MMP_RS05715 +0.4 1.9 hypothetical protein compare
MMP_RS01320 +0.4 1.5 hypothetical protein compare
MMP_RS07765 +0.4 2.2 sodium:alanine symporter family protein compare
MMP_RS09030 +0.4 1.9 hypothetical protein compare
MMP_RS03300 +0.4 0.4 TOBE domain-containing protein compare
MMP_RS03785 +0.4 1.7 cupin domain-containing protein compare
MMP_RS00385 +0.4 2.4 P-II family nitrogen regulator compare
MMP_RS02915 +0.4 1.7 amino acid ABC transporter permease compare
MMP_RS01930 +0.4 2.4 hypothetical protein compare
MMP_RS08325 +0.4 2.7 hypothetical protein compare
MMP_RS02170 +0.4 1.5 CBS domain-containing protein compare
MMP_RS01675 +0.4 0.8 hypothetical protein compare
MMP_RS07910 +0.4 1.9 NAD(P)H-hydrate dehydratase compare
MMP_RS07715 +0.4 2.0 YfcE family phosphodiesterase compare
MMP_RS01200 +0.4 1.3 hypothetical protein compare
MMP_RS06190 +0.4 2.5 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO compare
MMP_RS09035 +0.4 1.6 hypothetical protein compare
MMP_RS01110 +0.4 1.2 FmdE family protein compare
MMP_RS08275 +0.4 2.4 hypothetical protein compare
MMP_RS05820 +0.4 2.1 RNA-binding transcriptional accessory protein compare
MMP_RS07855 +0.4 2.1 class I SAM-dependent methyltransferase compare
MMP_RS08930 +0.4 0.5 hypothetical protein compare
MMP_RS01130 +0.4 2.1 flavoprotein compare
MMP_RS06185 +0.3 2.2 thermonuclease family protein compare
MMP_RS07620 +0.3 1.3 energy-coupling factor ABC transporter substrate-binding protein compare
MMP_RS07970 +0.3 0.9 hypothetical protein compare
MMP_RS02680 +0.3 1.7 ABC transporter permease compare
MMP_RS01935 +0.3 1.5 DUF58 domain-containing protein compare
MMP_RS09060 +0.3 2.2 hypothetical protein compare
MMP_RS08080 +0.3 2.2 YchF/TatD family DNA exonuclease compare
MMP_RS01920 +0.3 1.9 glycosyltransferase family 2 protein compare
MMP_RS00540 +0.3 1.3 PLP-dependent aminotransferase family protein compare
MMP_RS08620 +0.3 1.4 flagellar accessory protein FlaH compare
MMP_RS07885 +0.3 1.4 tripartite tricarboxylate transporter permease compare
MMP_RS07800 +0.3 1.9 ATP-binding cassette domain-containing protein compare
MMP_RS09065 +0.3 2.4 hypothetical protein compare
MMP_RS07590 +0.3 2.1 hypothetical protein compare
MMP_RS08130 +0.3 2.2 IGHMBP2 family helicase compare
MMP_RS00565 +0.3 2.0 CBS domain-containing protein compare
MMP_RS08490 +0.3 2.4 hypothetical protein compare
MMP_RS08265 +0.3 1.3 rubrerythrin compare
MMP_RS00295 +0.3 0.8 gamma carbonic anhydrase family protein compare
MMP_RS00145 +0.3 1.6 ATP-dependent Clp protease proteolytic subunit compare
MMP_RS06910 +0.3 1.7 RlmF-related methyltransferase compare
MMP_RS08415 +0.3 0.9 radical SAM protein compare
MMP_RS07185 +0.3 1.8 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS06310 +0.3 0.6 NAD(P)/FAD-dependent oxidoreductase compare
MMP_RS00660 +0.3 2.2 alkaline phosphatase family protein compare
MMP_RS07880 +0.3 1.6 AAA family ATPase compare
MMP_RS02985 +0.3 1.0 hypothetical protein compare
MMP_RS01120 +0.3 1.5 permease compare
MMP_RS01100 +0.3 0.5 ABC transporter ATP-binding protein compare
MMP_RS01125 +0.3 1.4 thioredoxin family protein compare
MMP_RS00335 +0.3 1.5 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMP_RS06005 +0.3 1.0 heavy-metal-associated domain-containing protein compare
MMP_RS01070 +0.3 1.8 hypothetical protein compare
MMP_RS00940 +0.3 1.6 daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein compare
MMP_RS04050 +0.3 1.1 hypothetical protein compare
MMP_RS00375 +0.3 1.7 ammonium transporter compare
MMP_RS01055 +0.3 1.1 hypothetical protein compare
MMP_RS06520 +0.3 1.6 DUF1786 domain-containing protein compare
MMP_RS08625 +0.3 1.7 type II/IV secretion system ATPase subunit compare
MMP_RS08290 +0.3 1.7 DNA-binding protein Alba compare
MMP_RS04195 +0.3 0.9 flavodoxin compare
MMP_RS01060 +0.3 2.0 calcium/sodium antiporter compare
MMP_RS02805 +0.3 0.5 HEPN domain-containing protein compare
MMP_RS06155 +0.3 0.5 DUF4186 domain-containing protein compare
MMP_RS00770 +0.3 1.3 hypothetical protein compare
MMP_RS08235 +0.3 0.9 hypothetical protein compare
MMP_RS06990 +0.3 1.1 CatB-related O-acetyltransferase compare
MMP_RS06095 +0.3 1.2 ABC transporter ATP-binding protein compare
MMP_RS02995 +0.3 1.3 acyl-CoA thioesterase compare
MMP_RS06570 +0.3 0.9 DUF190 domain-containing protein compare
MMP_RS07805 +0.3 1.8 ABC transporter permease compare
MMP_RS08250 +0.3 1.4 pyruvate kinase compare
MMP_RS09055 +0.3 0.3 CAP domain-containing protein compare
MMP_RS05790 +0.3 1.3 HDIG domain-containing protein compare
MMP_RS02375 +0.3 2.1 hypothetical protein compare
MMP_RS08470 +0.3 1.4 ATP-binding cassette domain-containing protein compare
MMP_RS00400 +0.3 0.9 tributyrin esterase compare
MMP_RS04530 +0.2 1.4 ABC transporter permease compare
MMP_RS02590 +0.2 1.6 low molecular weight phosphatase family protein compare
MMP_RS08975 +0.2 1.4 hypothetical protein compare
MMP_RS00570 +0.2 0.8 protein-L-isoaspartate O-methyltransferase compare
MMP_RS05110 +0.2 1.3 16S ribosomal RNA methyltransferase A compare
MMP_RS02895 +0.2 1.4 DHH family phosphoesterase compare
MMP_RS02310 +0.2 0.5 RimK-like ATPgrasp N-terminal domain-containing protein compare
MMP_RS01915 +0.2 1.1 DUF354 domain-containing protein compare
MMP_RS07345 +0.2 1.0 glycine synthesis protein GlyXL (from data) compare
MMP_RS01490 +0.2 1.2 tetratricopeptide repeat protein compare
MMP_RS06715 +0.2 1.7 cache domain-containing protein compare
MMP_RS01965 +0.2 0.7 DUF1616 domain-containing protein compare
MMP_RS03840 +0.2 1.1 hypothetical protein compare
MMP_RS04610 +0.2 0.7 Dabb family protein compare
MMP_RS02770 +0.2 0.7 hypothetical protein compare
MMP_RS04800 +0.2 1.4 chemotaxis protein CheW compare
MMP_RS06720 +0.2 1.5 response regulator transcription factor compare
MMP_RS01065 +0.2 1.7 alpha/beta hydrolase compare
MMP_RS01115 +0.2 1.0 molybdopterin molybdotransferase MoeA compare
MMP_RS06440 +0.2 1.1 CBS domain-containing protein compare
MMP_RS01420 +0.2 0.5 hypothetical protein compare
MMP_RS04190 +0.2 1.1 hypothetical protein compare
MMP_RS08770 +0.2 1.3 hypothetical protein compare
MMP_RS07960 +0.2 1.3 sugar phosphate isomerase/epimerase compare
MMP_RS05795 +0.2 1.1 redox-regulated ATPase YchF compare
MMP_RS06010 +0.2 1.5 heavy metal translocating P-type ATPase compare
MMP_RS01165 +0.2 1.1 DUF434 domain-containing protein compare
MMP_RS08610 +0.2 1.6 flagellar protein F compare
MMP_RS06530 +0.2 1.0 bifunctional hexulose-6-phosphate synthase/ribonuclease regulator compare
MMP_RS00670 +0.2 1.0 TIM barrel protein compare
MMP_RS05975 +0.2 0.4 hypothetical protein compare
MMP_RS07125 +0.2 1.0 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS08990 +0.2 0.9 hypothetical protein compare
MMP_RS04100 +0.2 0.6 hypothetical protein compare
MMP_RS06660 +0.2 1.1 glycosyltransferase family 4 protein compare
MMP_RS04300 +0.2 1.2 hypothetical protein compare
MMP_RS00665 +0.2 0.7 hypothetical protein compare
MMP_RS05270 +0.2 1.5 PEGA domain-containing protein compare
MMP_RS07650 +0.2 1.5 TldD/PmbA family protein compare
MMP_RS01140 +0.2 0.8 molybdate ABC transporter permease subunit compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in iron experiments

For iron Iron (II) chloride tetrahydrate across organisms