Experiment set7IT030 for Pseudomonas syringae pv. syringae B728a

Compare to:

apoplastic; Pepper

200 most important genes:

  gene name fitness t score description  
Psyr_1663 -5.1 -4.9 phosphoribosylanthranilate isomerase compare
Psyr_4609 -4.7 -14.2 anthranilate synthase, component I compare
Psyr_1212 -4.4 -4.1 type III secretion protein HrpO compare
Psyr_1269 -4.3 -3.0 phosphoribosylformylglycinamidine synthase compare
Psyr_4270 -4.2 -10.3 serine hydroxymethyltransferase compare
Psyr_1668 -4.0 -8.0 amidophosphoribosyltransferase compare
Psyr_1984 -4.0 -4.9 3-isopropylmalate dehydratase, small subunit compare
Psyr_4133 -4.0 -15.9 histidinol dehydrogenase compare
Psyr_4581 -4.0 -3.4 anthranilate synthase, component II compare
Psyr_0033 -3.9 -5.3 tryptophan synthase, alpha chain compare
Psyr_1985 -3.9 -11.2 3-isopropylmalate dehydrogenase compare
Psyr_1198 -3.8 -3.8 type III secretion protein HrpF compare
Psyr_4893 -3.8 -1.9 imidazole glycerol phosphate synthase subunit hisF compare
Psyr_0034 -3.6 -4.3 tryptophan synthase, beta chain compare
Psyr_4897 -3.6 -4.4 imidazoleglycerol-phosphate dehydratase compare
Psyr_0847 -3.6 -9.1 acetolactate synthase, small subunit compare
Psyr_0474 -3.5 -11.6 homoserine O-acetyltransferase compare
Psyr_1613 -3.5 -6.4 septum site-determining protein MinC compare
Psyr_3673 -3.4 -3.4 Phosphoglycerate/bisphosphoglycerate mutase compare
Psyr_1983 -3.4 -6.4 3-isopropylmalate dehydratase, large subunit compare
Psyr_4896 -3.3 -8.4 imidazole glycerol phosphate synthase subunit hisH compare
Psyr_0917 -3.3 -10.6 ABC-2 compare
Psyr_0846 -3.3 -13.6 acetolactate synthase, large subunit compare
Psyr_1669 -3.2 -10.1 O-succinylhomoserine sulfhydrylase compare
Psyr_4580 -3.2 -5.7 anthranilate phosphoribosyltransferase compare
Psyr_1190 -3.2 -5.2 type III transcriptional regulator HrpR compare
Psyr_4134 -3.2 -12.1 ATP phosphoribosyltransferase (homohexameric) compare
Psyr_1373 -3.1 -2.9 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_0473 -3.1 -7.8 Methionine biosynthesis MetW compare
Psyr_4894 -3.0 -7.8 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
Psyr_4132 -3.0 -10.8 histidinol phosphate aminotransferase apoenzyme compare
Psyr_1748 -3.0 -7.7 ATP-dependent Clp protease ATP-binding subunit ClpX compare
Psyr_3958 -3.0 -10.7 RNA polymerase, sigma-24 subunit, RpoE compare
Psyr_1217 -3.0 -5.5 Sigma-70 region 2:Sigma-70 region 4 compare
Psyr_1213 -2.9 -9.9 type III secretion cytoplasmic ATPase HrcN compare
Psyr_1350 -2.9 -4.8 site-2 protease, Metallo peptidase, MEROPS family M50B compare
Psyr_1121 -2.8 -2.5 6-phosphogluconolactonase compare
Psyr_0918 -2.8 -13.2 ABC transporter compare
Psyr_4417 -2.7 -2.2 Ferredoxin--nitrite reductase compare
Psyr_0469 -2.7 -10.8 dihydroxyacid dehydratase compare
Psyr_1544 -2.6 -5.2 SirA-like protein compare
Psyr_1210 -2.6 -5.8 type III secretion protein HrcQa compare
Psyr_1191 -2.5 -10.6 type III transcriptional regulator HrpS compare
Psyr_3008 -2.5 -5.3 Undecaprenyl-diphosphatase compare
Psyr_0231 -2.5 -2.2 conserved hypothetical protein compare
Psyr_0531 -2.5 -2.7 LmbE-like protein compare
Psyr_4203 -2.5 -2.4 SsrA-binding protein compare
Psyr_0576 -2.4 -2.6 ATP phosphoribosyltransferase regulatory subunit, putative compare
Psyr_2613 -2.4 -6.5 Cyclic peptide transporter compare
Psyr_1215 -2.3 -10.3 Type III secretion protein HrcV compare
Psyr_3886 -2.3 -1.9 methionyl-tRNA synthetase compare
Psyr_1205 -2.2 -9.3 type III secretion protein HrcU compare
Psyr_2808 -2.2 -3.0 hypothetical protein compare
Psyr_0848 -2.2 -9.0 ketol-acid reductoisomerase compare
Psyr_4991 -2.2 -3.0 hypothetical protein compare
Psyr_4455 -2.1 -3.6 conserved hypothetical protein compare
Psyr_4130 -2.1 -11.0 Peptidase S1, chymotrypsin:PDZ/DHR/GLGF compare
Psyr_1195 -2.1 -8.6 type III secretion apparatus lipoprotein, YscJ/HrcJ family compare
Psyr_2285 -2.1 -3.0 Twin-arginine translocation pathway signal compare
Psyr_0529 -2.1 -6.3 Glycosyl transferase, group 1 compare
Psyr_3179 -2.1 -3.5 DNA translocase FtsK compare
Psyr_1208 -2.0 -11.3 type III secretion protein HrcR compare
Psyr_4369 -2.0 -6.6 glutamate-5-semialdehyde dehydrogenase compare
Psyr_4335 -2.0 -2.3 transcriptional regulator, AsnC family compare
Psyr_4460 -2.0 -3.0 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II compare
Psyr_0219 -2.0 -9.2 phosphomannomutase compare
Psyr_1216 -1.9 -10.6 type III secretion outer membrane protein PopN compare
Psyr_1200 -1.9 -11.5 outer-membrane type III secretion protein HrcC compare
Psyr_4687 -1.9 -7.4 biotin synthase compare
Psyr_1304 -1.9 -2.6 CheW-like protein compare
Psyr_1197 -1.9 -5.1 type III secretion protein HrpE compare
Psyr_4740 -1.9 -5.8 thiazole-phosphate synthase compare
Psyr_4566 -1.8 -8.7 Peptidase M23B compare
Psyr_1257 -1.8 -6.6 2-isopropylmalate synthase compare
Psyr_2266 -1.8 -4.0 Binding-protein-dependent transport systems inner membrane component compare
Psyr_4844 -1.8 -7.3 HAD-superfamily hydrolase, subfamily IB (PSPase-like):HAD-superfamily subfamily IB hydrolase, hypothetical 2 compare
Psyr_3202 -1.8 -3.2 NADH dehydrogenase subunit G compare
Psyr_4852 -1.8 -6.2 D-3-phosphoglycerate dehydrogenase compare
Psyr_4362 -1.8 -4.0 Rare lipoprotein A compare
Psyr_4340 -1.8 -7.3 phosphomethylpyrimidine kinase, putative compare
Psyr_2617 -1.8 -2.4 Secretion protein HlyD compare
Psyr_3692 -1.8 -1.7 conserved hypothetical protein compare
Psyr_1206 -1.7 -6.6 type III secretion protein HrcT compare
Psyr_1211 -1.7 -6.0 type III secretion protein HrpP compare
Psyr_4361 -1.7 -3.8 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 compare
Psyr_0386 -1.7 -3.7 phosphoribosyl-AMP cyclohydrolase compare
Psyr_0557 -1.7 -4.3 phosphoserine phosphatase compare
Psyr_4169 -1.7 -2.7 4-carboxymuconolactone decarboxylase compare
Psyr_0167 -1.7 -2.1 hypothetical protein compare
Psyr_1218 -1.6 -8.3 type III helper protein HrpK1 compare
Psyr_2980 -1.6 -3.4 UDP-glucose pyrophosphorylase compare
Psyr_4341 -1.6 -5.5 thiamine-phosphate diphosphorylase compare
Psyr_2887 -1.6 -2.1 Endoribonuclease L-PSP compare
Psyr_0826 -1.6 -7.0 glucose-6-phosphate isomerase compare
Psyr_1747 -1.6 -3.9 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_5072 -1.5 -1.4 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K compare
Psyr_3312 -1.5 -5.0 transcriptional regulator, LysR family compare
Psyr_2088 -1.5 -2.6 2-methylaconitate cis-trans isomerase compare
Psyr_2471 -1.5 -2.2 hydroxymethylglutaryl-CoA lyase compare
Psyr_3081 -1.5 -2.9 Secretion protein HlyD compare
Psyr_0178 -1.5 -2.9 regulator of nucleoside diphosphate kinase compare
Psyr_0915 -1.5 -7.6 NAD-dependent epimerase/dehydratase compare
Psyr_1852 -1.5 -2.1 conserved hypothetical protein compare
Psyr_4278 -1.5 -1.9 regulatory protein, LuxR compare
Psyr_0268 -1.5 -1.8 DSBA oxidoreductase compare
Psyr_0920 -1.4 -10.9 Glycosyl transferase, group 1 compare
Psyr_0954 -1.4 -2.6 Protein of unknown function UPF0153 compare
Psyr_1911 -1.4 -3.2 conserved hypothetical protein compare
Psyr_0378 -1.4 -6.2 Glycosyl transferase, family 2 compare
Psyr_1196 -1.4 -2.0 type III secretion protein HrpD compare
Psyr_4151 -1.4 -1.4 Phosphocarrier HPr protein compare
Psyr_1630 -1.4 -3.1 ABC transporter compare
Psyr_0184 -1.4 -3.0 Protein of unknown function DUF484 compare
Psyr_3427 -1.4 -2.1 conserved hypothetical protein compare
Psyr_4418 -1.4 -2.5 Precorrin-6Y C5,15-methyltransferase (decarboxylating) compare
Psyr_4408 -1.4 -5.9 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Histidine kinase:Histidine kinase compare
Psyr_3841 -1.4 -2.2 conserved hypothetical protein compare
Psyr_1111 -1.4 -2.2 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_3675 -1.4 -3.1 adenosylcobinamide kinase compare
Psyr_3193 -1.4 -2.4 Transcription factor jumonji, jmjC compare
Psyr_3896 -1.3 -2.6 BFD-like [2Fe-2S]-binding region compare
Psyr_0630 -1.3 -6.0 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase compare
Psyr_1410 -1.3 -3.6 Holliday junction DNA helicase RuvB compare
Psyr_0528 -1.3 -2.5 Carbamoyltransferase compare
Psyr_4091 -1.3 -3.0 8-oxo-dGTPase compare
Psyr_0704 -1.3 -4.8 glutamate 5-kinase compare
Psyr_2833 -1.3 -2.1 CDS compare
Psyr_0936 -1.3 -7.7 Glycosyl transferase, group 1 compare
Psyr_3013 -1.3 -1.4 magnesium chelatase subunit ChlD compare
Psyr_0951 -1.3 -1.9 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_0919 -1.3 -7.5 Chromosome segregation ATPase-like protein compare
Psyr_0444 -1.3 -1.1 Malonate decarboxylase delta subunit compare
Psyr_0014 -1.2 -2.7 lipid A biosynthesis acyltransferase compare
Psyr_2014 -1.2 -3.5 conserved hypothetical protein compare
Psyr_3381 -1.2 -3.0 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_4407 -1.2 -1.2 phosphoribosylamine--glycine ligase compare
Psyr_3681 -1.2 -2.2 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
Psyr_3262 -1.2 -1.6 dnaK suppressor protein, putative compare
Psyr_3005 -1.2 -2.0 3-oxoadipate enol-lactonase compare
Psyr_5135 -1.2 -1.8 Protein of unknown function DUF37 compare
Psyr_1140 -1.2 -1.7 Disulfide bond formation protein DsbB compare
Psyr_2292 -1.2 -1.5 L-glutaminase compare
Psyr_4416 -1.1 -3.1 precorrin-8X methylmutase compare
Psyr_0827 -1.1 -2.8 pantothenate synthetase compare
Psyr_4183 -1.1 -1.6 protein translocase subunit secG compare
Psyr_2387 -1.1 -3.1 Malate:quinone-oxidoreductase compare
Psyr_1694 -1.1 -1.7 Rhomboid-like protein compare
Psyr_1408 -1.1 -2.4 Holliday junction endonuclease RuvC compare
Psyr_4940 -1.1 -1.6 3'(2'),5'-bisphosphate nucleotidase compare
Psyr_3127 -1.1 -3.8 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_2080 -1.1 -4.0 aminodeoxychorismate synthase, subunit I compare
Psyr_4843 -1.1 -3.8 NUDIX hydrolase compare
Psyr_2921 -1.1 -1.5 ADP-ribosylglycohydrolase compare
Psyr_1948 -1.1 -3.3 ABC transporter, periplasmic substrate-binding protein, putative compare
Psyr_3637 -1.1 -6.4 Glycosyl transferase, family 4 compare
Psyr_0385 -1.1 -2.5 phosphoribosyl-ATP pyrophosphatase compare
Psyr_4686 -1.1 -3.2 8-amino-7-oxononanoate synthase compare
Psyr_0914 -1.1 -5.4 Glycosyl transferase, group 1 compare
Psyr_2616 -1.0 -9.1 Amino acid adenylation compare
Psyr_4684 -1.0 -2.3 biotin synthesis protein BioC compare
Psyr_2618 -1.0 -3.6 ABC transporter:Protein of unknown function DUF214 compare
Psyr_4019 -1.0 -2.6 H-NS family protein MvaT compare
Psyr_0541 -1.0 -1.8 Small multidrug resistance protein compare
Psyr_2933 -1.0 -1.6 transcriptional regulator, TetR family compare
Psyr_2690 -1.0 -2.9 Glycosyl transferase, family 2 compare
Psyr_3791 -1.0 -2.5 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal compare
Psyr_0923 -1.0 -2.9 hypothetical protein compare
Psyr_1650 -1.0 -2.3 aminodeoxychorismate lyase apoprotein compare
Psyr_2615 -1.0 -7.7 Amino acid adenylation compare
Psyr_3519 -1.0 -3.1 hypothetical protein compare
Psyr_0734 -0.9 -1.7 Protein of unknown function DUF159 compare
Psyr_4512 -0.9 -2.9 putative phage-related protein compare
Psyr_0103 -0.9 -3.6 conserved hypothetical protein compare
Psyr_4015 -0.9 -1.9 conserved domain protein compare
Psyr_2464 -0.9 -4.3 methionine synthase (B12-dependent) compare
Psyr_1097 -0.9 -1.0 glycine cleavage system H protein compare
Psyr_2429 -0.9 -3.4 conserved hypothetical protein compare
Psyr_5065 -0.9 -4.1 ATP-dependent DNA helicase UvrD compare
Psyr_0356 -0.9 -1.5 L-cystine ABC transporter ATP-binding protein / Diaminopimelate ABC transporter ATP-binding protein compare
Psyr_4414 -0.9 -3.0 precorrin-3 methyltransferase compare
Psyr_0050 -0.9 -3.3 Lysine exporter protein (LYSE/YGGA) compare
Psyr_1401 -0.9 -3.7 Histidine triad (HIT) protein compare
Psyr_3636 -0.9 -5.5 Polysaccharide biosynthesis protein CapD compare
Psyr_1372 -0.9 -2.4 Protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
Psyr_2614 -0.9 -7.4 Amino acid adenylation compare
Psyr_4194 -0.9 -2.2 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal compare
Psyr_3995 -0.9 -2.1 Helix-turn-helix, Fis-type compare
Psyr_1458 -0.9 -1.7 hypothetical protein compare
Psyr_4018 -0.9 -4.4 Formyltetrahydrofolate deformylase compare
Psyr_1286 -0.9 -3.2 tyrosine recombinase XerD subunit compare
Psyr_0454 -0.9 -3.0 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_3640 -0.9 -2.2 conserved hypothetical protein compare
Psyr_2855 -0.9 -2.9 methionine synthase (B12-independent) compare
Psyr_2823 -0.9 -1.0 hypothetical protein compare
Psyr_2640 -0.8 -2.8 NUDIX hydrolase compare
Psyr_5130 -0.8 -4.2 chromosome segregation ATPase compare
Psyr_2228 -0.8 -2.3 conserved hypothetical protein compare
Psyr_2767 -0.8 -1.6 Glycoside hydrolase, family 19 compare
Psyr_3674 -0.8 -1.2 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase compare
Psyr_0532 -0.8 -3.1 conserved hypothetical protein compare


Specific Phenotypes

For 2 genes in this experiment