Experiment set7IT029 for Caulobacter crescentus NA1000
PYE_noCalcium 25C survival rep1 28 days
Group: survivalMedia: PYE_noCalcium
Culturing: Caulo_ML2, tube, Aerobic, at 25 (C), shaken=200 rpm
By: Sneha on 8-Aug-18
Media components: 2 g/L Bacto Peptone, 1 g/L Yeast Extract, 0.8 mM Magnesium sulfate
Specific Phenotypes
For 10 genes in this experiment
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Flagellum | 2 |
| Arginine and Ornithine Degradation | 1 |
| Peptidoglycan Biosynthesis | 1 |
| Type IV pilus | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| L-arginine degradation II (AST pathway) | 5 | 3 | 1 |
| peptidoglycan biosynthesis II (staphylococci) | 17 | 12 | 2 |
| peptidoglycan biosynthesis IV (Enterococcus faecium) | 17 | 12 | 2 |
| peptidoglycan biosynthesis V (β-lactam resistance) | 17 | 11 | 2 |
| peptidoglycan biosynthesis I (meso-diaminopimelate containing) | 12 | 11 | 1 |
| peptidoglycan maturation (meso-diaminopimelate containing) | 12 | 3 | 1 |
| peptidoglycan biosynthesis III (mycobacteria) | 15 | 11 | 1 |