Experiment set7IT025 for Pseudomonas fluorescens FW300-N2E2

Compare to:

LB with Lomefloxacin hydrochloride 0.0002 mM

Genes with specific phenotypes:

  gene name fitness t score description  
Pf6N2E2_3840 -5.0 -9.0 FIG00956267: hypothetical protein conserved
Pf6N2E2_3168 -4.5 -9.6 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) conserved
Pf6N2E2_5845 -3.1 -8.3 Nucleoside ABC transporter, periplasmic nucleoside-binding protein compare
Pf6N2E2_2699 -2.7 -9.6 Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO conserved
Pf6N2E2_5171 -2.4 -15.5 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) compare
Pf6N2E2_3370 -2.4 -10.3 DNA repair protein RecN conserved
Pf6N2E2_5076 -2.4 -7.3 DNA repair protein RadA conserved
Pf6N2E2_5846 -2.2 -10.7 Nucleoside ABC transporter, periplasmic nucleoside-binding protein conserved
Pf6N2E2_1661 -2.2 -7.5 RND efflux system, inner membrane transporter CmeB conserved
Pf6N2E2_3856 -2.0 -7.4 Lysine-arginine-ornithine-binding periplasmic protein precursor (TC 3.A.1.3.1) conserved
Pf6N2E2_2940 -1.7 -6.4 OmpA family protein compare
Pf6N2E2_2942 -1.5 -8.1 ATP-dependent helicase DinG/Rad3 conserved
Pf6N2E2_4218 -1.5 -8.3 hypothetical protein compare
Pf6N2E2_4174 -1.4 -9.3 Methionine ABC transporter substrate-binding protein compare
Pf6N2E2_158 -1.3 -7.4 Endonuclease I precursor (EC 3.1.21.1) conserved
Pf6N2E2_5414 -1.1 -6.7 Nucleoid-associated protein compare
Pf6N2E2_4632 -1.0 -7.9 Amine oxidase [flavin-containing] (EC 1.4.3.4) compare
Pf6N2E2_2523 -1.0 -5.7 Methylthioribose-1-phosphate isomerase (EC 5.3.1.23) compare
Pf6N2E2_3030 +1.2 6.5 hypothetical protein compare
Pf6N2E2_2645 +1.3 6.1 ATP-dependent DNA helicase RecQ conserved
Pf6N2E2_4378 +1.3 5.1 Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) compare
Pf6N2E2_3029 +1.6 7.0 Holin conserved
Pf6N2E2_926 +1.8 7.0 NADH dehydrogenase (EC 1.6.99.3) compare
Pf6N2E2_3085 +1.9 6.4 FIG00954614: hypothetical protein compare
Pf6N2E2_4593 +2.0 10.3 Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB conserved
Pf6N2E2_4673 +2.4 10.2 ATP-dependent 23S rRNA helicase DbpA compare
Pf6N2E2_5525 +2.8 21.7 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases compare
Pf6N2E2_5046 +3.7 26.7 ATP-dependent RNA helicase PA3950 conserved
Pf6N2E2_3279 +3.9 17.8 FIG138315: Putative alpha helix protein compare


Specific phenotypes for stress Lomefloxacin hydrochloride across organisms