Experiment set7IT025 for Desulfovibrio vulgaris Hildenborough JW710

Compare to:

MoYLS4 with Aluminum 1mM

200 most detrimental genes:

  gene name fitness t score description  
DVU1842 +1.4 1.7 lipoprotein, putative (TIGR) compare
DVU1033 cinA +1.3 1.6 competence/damage-inducible protein CinA protein, truncation (TIGR) compare
DVU2863 +1.1 1.5 hypothetical protein (TIGR) compare
DVU1377 ilvN-2 +1.0 1.2 acetolactate synthase, small subunit (TIGR) compare
DVU2577 +1.0 4.0 DNA-binding response regulator, LuxR family (TIGR) compare
DVU3109 +0.9 2.5 iron-sulfur cluster-binding protein (TIGR) compare
DVU1630 ptsN +0.9 1.1 PTS system, IIA component (TIGR) compare
DVU2454 +0.8 0.7 hypothetical protein (TIGR) compare
DVU2578 +0.8 4.5 response regulator (TIGR) compare
DVU2046 +0.8 0.9 hypothetical protein (TIGR) compare
DVU1679 idi +0.8 2.3 isopentenyl-diphosphate delta-isomerase (TIGR) compare
DVU0251 +0.8 6.7 membrane protein, putative (TIGR) compare
DVU1850 +0.8 1.3 CBS domain protein (TIGR) compare
DVU0223 +0.7 1.5 conserved hypothetical protein (TIGR) compare
DVU2044 +0.7 1.0 hypothetical protein (TIGR) compare
DVU0859 +0.7 5.9 hypothetical protein (TIGR) compare
DVU0432 +0.7 2.6 Ech hydrogenase, subunit EchC, putative (TIGR) compare
DVU2539 +0.7 0.8 hypothetical protein (TIGR) compare
DVU0250 +0.6 3.6 hypothetical protein (TIGR) compare
DORF19331 +0.6 2.1 no description compare
DVU1632 +0.6 2.6 PTS system, IIA component (TIGR) compare
DVU1247 +0.6 2.2 hypothetical protein (TIGR) compare
DVU2761 +0.6 0.6 hypothetical protein (TIGR) compare
DVU0451 +0.6 5.2 chloride channel family protein (TIGR) compare
DVU0376 +0.6 1.2 hypothetical protein (TIGR) compare
DVU0690 +0.6 2.9 conserved hypothetical protein (TIGR) compare
DVU1682 +0.6 1.6 GAF domain protein (TIGR) compare
DVU0259 divK +0.6 1.6 DNA-binding response regulator (TIGR) compare
DVU1944 oorD +0.6 1.2 pyruvate ferredoxin oxidoreductase, iron-sulfur binding subunit, putative (TIGR) compare
DVU1084 pstB-1 +0.6 3.7 phosphate ABC transporter, ATP-binding protein (TIGR) compare
DVU2200 +0.6 0.7 hypothetical protein (TIGR) compare
DVU0973 +0.6 0.3 4-hydroxybenzoate octaprenyltransferase, putative (TIGR) compare
DVU0302 +0.5 3.4 chemotaxis protein CheX, putative (TIGR) compare
DVU2915 +0.5 4.3 hypothetical protein (TIGR) compare
DVU1704 +0.5 0.6 conserved hypothetical protein (TIGR) compare
DVU1491 +0.5 1.4 conserved hypothetical protein (TIGR) compare
DVU3139 +0.5 1.1 bacterial extracellular solute-binding protein, family 3 (TIGR) compare
DVU1844 +0.5 0.5 septum formation initiator family protein (TIGR) compare
DVU2303 +0.5 1.4 conserved domain protein (TIGR) compare
DVU2808 +0.5 2.3 TonB domain protein (TIGR) compare
DVU1351 +0.5 0.9 membrane protein, MarC family (TIGR) compare
DVU0746 cysW +0.5 2.6 ABC transporter, permease protein (TIGR) compare
DVU3302 +0.5 1.4 hypothetical protein (TIGR) compare
DVU1900 +0.5 3.5 conserved hypothetical protein (TIGR) compare
DORF26459 +0.5 2.2 no description compare
DVU3304 +0.5 4.2 SEED: integral membrane sensor signal transduction histidine kinase compare
DVU1395 +0.5 1.7 C4-type zinc finger protein, DksA/TraR family (TIGR) compare
DVU2945 +0.5 1.5 conserved domain protein (TIGR) compare
DORF47110 +0.5 1.1 no description compare
DORF35977 +0.5 2.7 no description compare
DVU0358 +0.5 1.7 hypothetical protein (TIGR) compare
DVU0830 ptsH +0.5 0.8 phosphocarrier protein HPr (TIGR) compare
DVU2223 +0.5 1.1 hypothetical protein (TIGR) compare
DVU0937 +0.5 2.8 hypothetical protein (TIGR) compare
DORF18707 +0.5 0.4 no description compare
DVU2669 +0.5 1.4 conserved domain protein (TIGR) compare
DVU1192 acyP +0.5 1.1 acylphosphatase (TIGR) compare
DVU1756 +0.5 2.3 hypothetical protein (TIGR) compare
DORF10446 +0.4 3.1 SEED: FIG00604570: hypothetical protein compare
DVU0702 +0.4 1.8 cytochrome c family protein (TIGR) compare
DVU3351 queA +0.4 3.6 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (TIGR) compare
DVU3364 +0.4 2.0 conserved hypothetical protein (TIGR) compare
DORF13021 +0.4 1.1 no description compare
DVU2479 pstA-2 +0.4 3.6 phosphate ABC transporter, permease protein, putative (TIGR) compare
DVU0726 tgt +0.4 3.1 queuine tRNA-ribosyltransferase (TIGR) compare
DVU0688 +0.4 2.5 hypothetical protein (TIGR) compare
DVU2026 +0.4 1.5 conserved hypothetical protein (TIGR) compare
DVU2212 +0.4 3.2 conserved hypothetical protein (TIGR) compare
DORF15229 +0.4 1.5 no description compare
DVU1257 +0.4 1.3 RNA-binding protein (TIGR) compare
DVU3009 +0.4 3.0 radical SAM domain protein (TIGR) compare
DVU2838 +0.4 1.6 conserved hypothetical protein (TIGR) compare
DVUA0084 +0.4 0.7 transcriptional regulator, AbrB family (TIGR) compare
DVU2251 +0.4 2.0 DNA-binding protein (TIGR) compare
DVU0447 +0.4 0.9 membrane protein, putative (TIGR) compare
DVU1093 +0.4 1.3 HAD-superfamily hydrolase, subfamily IA, variant 3 (TIGR) compare
DVU0798 +0.4 0.6 hypothetical protein (TIGR) compare
DVU0366 +0.4 2.4 5-formyltetrahydrofolate cyclo-ligase family protein (TIGR) compare
DVU2712 +0.4 1.7 hypothetical protein (TIGR) compare
DORF14879 +0.4 1.4 no description compare
DVU1996 +0.4 1.5 quaternary ammonium compound-resistance protein QacC, putative (TIGR) compare
DVU2677 +0.4 2.9 sensor histidine kinase/response regulator (TIGR) compare
DVU3305 atoC +0.4 3.2 sigma-54 dependent transcriptional regulator/response regulator (TIGR) compare
DVU0590 +0.4 1.3 hypothetical protein (TIGR) compare
DVU1499 +0.4 1.1 hypothetical protein (TIGR) compare
DVU2498 +0.4 1.5 hypothetical protein (TIGR) compare
DVU1600 +0.4 2.5 adenylate cyclase (TIGR) compare
DVU2021 +0.4 2.0 hypothetical protein (TIGR) compare
DVU0566 +0.4 1.7 GAF domain protein (TIGR) compare
DVUA0030 +0.4 2.4 hypothetical protein (TIGR) compare
DVU1280 +0.4 1.3 conserved hypothetical protein TIGR00159 (TIGR) compare
DVU0511 +0.4 1.0 conserved hypothetical protein (TIGR) compare
DVU0654 +0.4 2.5 peptidase, U32 family (TIGR) compare
DVU2184 +0.4 1.5 DNA-binding domain, excisionase family (TIGR) compare
DVU0024 +0.4 0.6 conserved hypothetical protein (TIGR) compare
DVU0923 +0.4 1.6 endoribonuclease, L-PSP family (TIGR) compare
DVU2126 +0.4 1.4 hypothetical protein (TIGR) compare
DVU1742 +0.4 1.3 prevent-host-death family protein (TIGR) compare
DVU3223 aspB +0.4 2.7 aspartate aminotransferase (TIGR) compare
DVU0939 +0.4 2.3 conserved hypothetical protein (TIGR) compare
DVU2873 +0.4 0.4 hypothetical protein (TIGR) compare
DVU0787 +0.4 0.5 hypothetical protein (TIGR) compare
DVU0790 +0.4 2.0 radical SAM protein, TIGR01212 family (TIGR) compare
DVU1827 +0.4 2.4 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase family protein (TIGR) compare
DVU0339 serA +0.4 2.0 D-isomer specific 2-hydroxyacid dehydrogenase family protein (TIGR) compare
DORF11409 +0.4 1.2 SEED: FIG00606517: hypothetical protein compare
DVU0320 +0.3 1.3 conserved hypothetical protein (TIGR) compare
DVU0747 cysA +0.3 1.6 ABC transporter, ATP-binding protein (TIGR) compare
DVU2477 pstS +0.3 2.4 phosphate ABC transporter, periplasmic phosphate-binding protein, putative (TIGR) compare
DVU3180 +0.3 2.9 GGDEF domain protein (TIGR) compare
DVU0001 dnaA-1 +0.3 1.5 chromosomal replication initiator protein DnaA (TIGR) compare
DVU0203 +0.3 1.3 conserved hypothetical protein (TIGR) compare
DORF12810 +0.3 1.4 no description compare
DVU0677 +0.3 2.0 transglycosylase domain protein (TIGR) compare
DVU1436 +0.3 0.3 hypothetical protein (TIGR) compare
DVU1705 +0.3 1.4 type I restriction-modification enzyme, S subunit (TIGR) compare
DVU1389 +0.3 1.3 hypothetical protein (TIGR) compare
DVU0359 +0.3 1.4 HesB-like domain (TIGR) compare
DVU0760 +0.3 2.0 hypothetical protein (TIGR) compare
DVU1143 +0.3 1.4 hypothetical protein (TIGR) compare
DVU3217 +0.3 1.0 hypothetical protein (TIGR) compare
DVU0008 +0.3 0.3 hypothetical protein (TIGR) compare
DVU1726 +0.3 0.6 hypothetical protein (TIGR) compare
DVU3362 +0.3 1.9 conserved hypothetical protein (TIGR) compare
DVUA0135 +0.3 1.5 CRISPR-associated protein Cas2 (TIGR) compare
DVU1531 +0.3 1.1 methyltransferase, putative (TIGR) compare
DVU2684 +0.3 1.3 hypothetical protein (TIGR) compare
DVU2881 +0.3 1.4 phage/plasmid primase, P4 family (TIGR) compare
DVU2840 +0.3 1.0 conserved hypothetical protein (TIGR) compare
DVU0214 +0.3 0.6 tail/DNA circulation protein, putative (TIGR) compare
DVUA0091 katA +0.3 1.7 catalase (TIGR) compare
DVU0878 +0.3 2.0 dnaK suppressor protein, putative (TIGR) compare
DVU0533 hmcD +0.3 0.5 HmcD, 5.8 kd protein in hmc operon (voordouw) compare
DVU2875 +0.3 1.6 DNA-binding domain, excisionase family (TIGR) compare
DVU1743 +0.3 0.6 hypothetical protein (TIGR) compare
DVU0191 +0.3 2.0 conserved hypothetical protein (TIGR) compare
DVU2661 CueO +0.3 2.4 twin-arginine translocation pathway signal sequence domain protein (TIGR) compare
DVU0756 +0.3 1.6 TPR domain protein (TIGR) compare
DVU1777 cynT +0.3 0.4 carbonic anhydrase (TIGR) compare
DVU3008 +0.3 1.8 NeuB family protein (TIGR) compare
DVU2524 +0.3 1.8 cytochrome c3, putative (TIGR) compare
DVU2012 +0.3 0.4 hypothetical protein (TIGR) compare
DVU2835 +0.3 1.9 transcriptional regulator, putative (TIGR) compare
DVU2023 +0.3 1.8 hypothetical protein (TIGR) compare
DVU1431 +0.3 2.2 hpt domain protein/STAS domain protein (TIGR) compare
DVU2972 +0.3 1.2 chemotaxis protein CheD, putative (TIGR) compare
DVU2392 +0.3 1.6 type III secretion chaperone, CesT family (TIGR) compare
DVU1237 glnP +0.3 1.1 amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) compare
DVU0247 ntrX +0.3 1.3 response regulator (TIGR) compare
DVU1958 +0.3 2.1 sensory box histidine kinase (TIGR) compare
DVU2839 +0.3 1.5 conserved hypothetical protein (TIGR) compare
DVU3303 lon +0.3 2.5 ATP-dependent protease La, truncation (TIGR) compare
DVU0382 +0.3 1.2 hypothetical protein (TIGR) compare
DVU1421 +0.3 1.2 hypothetical protein (TIGR) compare
DVU1217 +0.3 2.1 MATE efflux family protein (TIGR) compare
DVU1796 +0.3 0.5 hypothetical protein (TIGR) compare
DVU2475 +0.3 1.8 oxidoreductase, NAD-binding, putative (TIGR) compare
DVU2151 +0.3 1.5 conserved hypothetical protein (TIGR) compare
DVU2867 +0.3 0.4 holin (TIGR) compare
DVU1225 +0.3 0.5 hypothetical protein (TIGR) compare
DVU1348 xseB +0.3 0.7 exodeoxyribonuclease VII, small subunit (TIGR) compare
DVU2160 +0.3 1.6 hypothetical protein (TIGR) compare
DVU2022 +0.3 2.1 conserved hypothetical protein (TIGR) compare
DVU0212 +0.3 0.7 conserved hypothetical protein (TIGR) compare
DVU0538 +0.3 2.2 AP endonuclease, family 2 (TIGR) compare
DVU1518 +0.3 0.9 transcriptional regulator cI, truncation (TIGR) compare
DVU0196 +0.3 0.4 hypothetical protein (TIGR) compare
DVU1156 +0.3 1.9 sigma-54 dependent transcriptional regulator, putative/response regulator (TIGR) compare
DVU1475 +0.3 1.3 PhoU family protein (TIGR) compare
DORF27863 +0.3 1.9 no description compare
DVU0216 +0.3 1.1 phage baseplate assembly protein V, putative (TIGR) compare
DVUA0116 +0.3 1.2 conserved hypothetical protein (TIGR) compare
DVU2548 acpD +0.3 1.9 acyl carrier protein phosphodiesterase (TIGR) compare
DVUA0053 +0.3 1.6 conserved hypothetical protein (TIGR) compare
DVU2670 +0.3 0.8 hypothetical protein (TIGR) compare
DVU1458 +0.3 1.4 chemotaxis protein CheZ, putative (TIGR) compare
DVU1693 gltX-1 +0.3 1.8 glutamyl-tRNA synthetase (TIGR) compare
DVU1550 +0.3 1.4 phosphoglycerate mutase family protein (TIGR) compare
DVU3193 +0.3 1.3 DNA-binding domain, excisionase family (TIGR) compare
DVU2811 +0.3 1.0 formate dehydrogenase, beta subunit, putative (TIGR) compare
DVU0274 +0.3 1.1 hypothetical protein (TIGR) compare
DVU3199 +0.3 1.0 conserved hypothetical protein TIGR00103 (TIGR) compare
DVU3381 ntrC +0.3 2.2 transcriptional regulatory protein zraR (TIGR) compare
DVU0423 +0.3 2.3 universal stress protein family (TIGR) compare
DVU2615 +0.3 1.9 bacterial extracellular solute-binding protein, family 3 (TIGR) compare
DVU2326 +0.3 2.2 conserved domain protein (TIGR) compare
DVU2971 +0.3 1.7 glycosyl transferase, family 8 (TIGR) compare
DVU3375 ftsE +0.3 1.7 cell division ATP-binding protein FtsE, putative (TIGR) compare
DVU1589 +0.3 1.2 hypothetical protein (TIGR) compare
DVU0575 +0.3 0.9 hypothetical protein (TIGR) compare
DVU2692 +0.3 0.2 conserved domain protein (TIGR) compare
DVU2418 +0.3 1.1 vanZ-like family protein (TIGR) compare
DVU0526 +0.3 1.9 drug resistance transporter, putative (TIGR) compare
DORF27889 +0.3 1.0 no description compare
DVU1471 hspC +0.3 1.5 heat shock protein, Hsp20 family (TIGR) compare
DVU2843 vsr +0.3 1.6 DNA mismatch endonuclease Vsr, putative (TIGR) compare
DVU1185 +0.3 0.8 colicin V production family protein (TIGR) compare
DVU2619 +0.3 0.8 conserved hypothetical protein (TIGR) compare
DVU0164 +0.3 1.8 cation efflux family protein (TIGR) compare
DVU2566 lysA-2 +0.3 0.4 diaminopimelate decarboxylase (TIGR) compare


Specific Phenotypes

None in this experiment

For Desulfovibrio vulgaris Hildenborough JW710 in stress experiments

For stress Aluminum chloride hydrate across organisms