Experiment set7IT022 for Pseudomonas fluorescens FW300-N2E2
LB with Fusidic acid sodium salt 0.3 mg/ml
Group: stressMedia: LB + Fusidic acid sodium salt (0.3 mg/ml)
Culturing: pseudo6_N2E2_ML5, 24 deep-well microplate; Multitron, Aerobic, at 30 (C), shaken=500 rpm
By: Mark on 2/1/2016
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride
Specific Phenotypes
For 5 genes in this experiment
For stress Fusidic acid sodium salt in Pseudomonas fluorescens FW300-N2E2
For stress Fusidic acid sodium salt across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| ABC transporter alkylphosphonate (TC 3.A.1.9.1) | 1 |
| Carboxysome | 1 |
| Copper homeostasis | 1 |
| Respiratory dehydrogenases 1 | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| NADH to cytochrome bo oxidase electron transfer I | 2 | 2 | 1 |
| NADH to cytochrome bd oxidase electron transfer I | 2 | 1 | 1 |
| aerobic respiration III (alternative oxidase pathway) | 3 | 3 | 1 |
| aerobic respiration I (cytochrome c) | 4 | 3 | 1 |
| NAD(P)/NADPH interconversion | 6 | 3 | 1 |
| Fe(II) oxidation | 6 | 3 | 1 |