Experiment set7IT022 for Pseudomonas syringae pv. syringae B728a

Compare to:

L-Malic acid carbon source

Genes with specific phenotypes:

  gene name fitness t score description  
Psyr_4113 -5.1 -6.0 LppC putative lipoprotein compare
Psyr_4069 -3.7 -9.6 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal compare
Psyr_4290 -3.4 -10.7 conserved domain protein compare
Psyr_2192 -2.7 -7.2 transcriptional regulator, TetR family compare
Psyr_1575 -2.5 -12.9 conserved hypothetical protein compare
Psyr_3128 -2.4 -6.7 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal compare
Psyr_1599 -2.4 -12.9 C-terminal processing peptidase-1, Serine peptidase, MEROPS family S41A compare
Psyr_3045 -2.3 -9.0 PqiB family protein compare
Psyr_3046 -2.3 -6.9 Protein of unknown function DUF330 compare
Psyr_3043 -2.3 -5.3 Paraquat-inducible protein A compare
Psyr_5085 -2.2 -11.5 Twin-arginine translocation pathway signal compare
Psyr_4229 -2.2 -12.6 ABC transporter:ABC transporter, N-terminal compare
Psyr_0937 -2.2 -9.4 mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase (GDP) compare
Psyr_3044 -2.1 -6.2 Paraquat-inducible protein A compare
Psyr_2070 -2.0 -11.5 ErfK/YbiS/YcfS/YnhG compare
Psyr_2072 -2.0 -9.3 conserved hypothetical protein compare
Psyr_3563 -1.8 -5.5 arginine succinyltransferase compare
Psyr_0721 -1.7 -6.4 glycine oxidase compare
Psyr_4575 -1.7 -9.9 adenosylmethionine decarboxylase proenzyme compare
Psyr_1394 -1.6 -9.6 potassium transporter compare
Psyr_4613 -1.6 -9.7 Binding-protein-dependent transport systems inner membrane component compare
Psyr_4612 -1.5 -5.5 Binding-protein-dependent transport systems inner membrane component compare
Psyr_3564 -1.5 -6.2 arginine succinyltransferase compare
Psyr_3708 -1.5 -6.5 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal compare
Psyr_4572 -1.5 -6.3 Short-chain dehydrogenase/reductase SDR compare
Psyr_3707 -1.4 -6.4 Sodium:dicarboxylate symporter conserved
Psyr_4938 -1.2 -5.6 Helix-turn-helix, Fis-type conserved
Psyr_0232 -1.2 -6.8 gamma-glutamylputrescine oxidase compare
Psyr_0054 -1.2 -5.2 alginate regulatory protein AlgR3 compare
Psyr_4117 -1.2 -5.3 Stringent starvation protein B compare
Psyr_0410 -1.1 -6.2 conserved hypothetical protein compare
Psyr_4357 -1.1 -6.3 HopAJ2 protein compare
Psyr_3959 -1.0 -7.1 L-aspartate oxidase compare
Psyr_4345 +1.0 7.3 tRNA-i(6)A37 thiotransferase enzyme MiaB compare
Psyr_4200 +1.2 5.3 Protein of unknown function UPF0125 compare
Psyr_1746 +1.3 6.4 Trigger factor compare
Psyr_1245 +1.5 5.8 23S rRNA m(2)A-2503 methyltransferase compare
Psyr_3615 +1.7 11.0 Aminotransferase, class I and II compare
Psyr_1411 +1.7 6.6 4-hydroxybenzoyl-CoA thioesterase compare
Psyr_1396 +2.7 20.8 Protein of unknown function DUF470:Protein of unknown function DUF471:Protein of unknown function DUF472 compare
Psyr_4343 +2.8 9.2 Sel1-like repeat protein compare
Psyr_0291 +3.0 17.3 DedA compare


Specific phenotypes for carbon source L-Malic acid across organisms