Experiment set7IT021 for Pseudomonas syringae pv. syringae B728a

Compare to:

Citric Acid carbon source

200 most important genes:

  gene name fitness t score description  
Psyr_4581 -5.4 -3.6 anthranilate synthase, component II compare
Psyr_4894 -4.6 -6.3 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
Psyr_3691 -4.6 -5.4 conserved hypothetical protein compare
Psyr_4897 -4.5 -4.3 imidazoleglycerol-phosphate dehydratase compare
Psyr_1984 -4.5 -3.0 3-isopropylmalate dehydratase, small subunit compare
Psyr_0473 -4.4 -5.2 Methionine biosynthesis MetW compare
Psyr_4609 -4.3 -11.4 anthranilate synthase, component I compare
Psyr_0557 -4.3 -4.2 phosphoserine phosphatase compare
Psyr_4896 -4.3 -5.0 imidazole glycerol phosphate synthase subunit hisH compare
Psyr_4580 -4.2 -4.1 anthranilate phosphoribosyltransferase compare
Psyr_0411 -4.2 -15.7 glutamate synthase (NADPH) large subunit compare
Psyr_0014 -4.2 -2.9 lipid A biosynthesis acyltransferase compare
Psyr_1663 -4.2 -2.9 phosphoribosylanthranilate isomerase compare
Psyr_1983 -4.2 -5.7 3-isopropylmalate dehydratase, large subunit compare
Psyr_4134 -4.2 -9.2 ATP phosphoribosyltransferase (homohexameric) compare
Psyr_1985 -4.1 -8.3 3-isopropylmalate dehydrogenase compare
Psyr_4133 -4.1 -11.1 histidinol dehydrogenase compare
Psyr_0469 -4.1 -8.6 dihydroxyacid dehydratase compare
Psyr_0412 -3.9 -10.3 glutamate synthase (NADPH) small subunit compare
Psyr_4132 -3.9 -11.2 histidinol phosphate aminotransferase apoenzyme compare
Psyr_4113 -3.9 -12.8 LppC putative lipoprotein compare
Psyr_1669 -3.9 -8.5 O-succinylhomoserine sulfhydrylase compare
Psyr_0474 -3.8 -8.5 homoserine O-acetyltransferase compare
Psyr_4270 -3.8 -8.1 serine hydroxymethyltransferase compare
Psyr_1544 -3.8 -2.6 SirA-like protein compare
Psyr_0704 -3.8 -8.6 glutamate 5-kinase compare
Psyr_0847 -3.8 -9.1 acetolactate synthase, small subunit compare
Psyr_4852 -3.8 -7.5 D-3-phosphoglycerate dehydrogenase compare
Psyr_1257 -3.7 -9.5 2-isopropylmalate synthase compare
Psyr_0846 -3.7 -11.9 acetolactate synthase, large subunit compare
Psyr_1614 -3.7 -2.5 lipid A biosynthesis acyltransferase compare
Psyr_0576 -3.6 -3.9 ATP phosphoribosyltransferase regulatory subunit, putative compare
Psyr_1668 -3.6 -4.8 amidophosphoribosyltransferase compare
Psyr_0811 -3.5 -8.0 Integral membrane protein TerC compare
Psyr_0951 -3.5 -4.7 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_3262 -3.5 -4.0 dnaK suppressor protein, putative compare
Psyr_0831 -3.4 -2.3 Two-component response regulator CbrB compare
Psyr_4128 -3.4 -9.7 sulfate adenylyltransferase subunit 2 compare
Psyr_0936 -3.4 -12.1 Glycosyl transferase, group 1 compare
Psyr_3174 -3.4 -3.9 uroporphyrinogen-III C-methyltransferase / precorrin-2 dehydrogenase compare
Psyr_0827 -3.3 -4.4 pantothenate synthetase compare
Psyr_0848 -3.3 -10.7 ketol-acid reductoisomerase compare
Psyr_0034 -3.2 -3.1 tryptophan synthase, beta chain compare
Psyr_1373 -3.2 -2.2 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_0033 -3.2 -4.2 tryptophan synthase, alpha chain compare
Psyr_0915 -3.2 -10.7 NAD-dependent epimerase/dehydratase compare
Psyr_1269 -3.2 -3.7 phosphoribosylformylglycinamidine synthase compare
Psyr_4844 -3.1 -10.5 HAD-superfamily hydrolase, subfamily IB (PSPase-like):HAD-superfamily subfamily IB hydrolase, hypothetical 2 compare
Psyr_0531 -3.1 -2.1 LmbE-like protein compare
Psyr_4893 -3.1 -2.1 imidazole glycerol phosphate synthase subunit hisF compare
Psyr_1899 -3.1 -5.5 General substrate transporter:Major facilitator superfamily compare
Psyr_4369 -3.1 -5.8 glutamate-5-semialdehyde dehydrogenase compare
Psyr_0664 -3.1 -6.4 ABC transporter compare
Psyr_4407 -3.1 -2.1 phosphoribosylamine--glycine ligase compare
Psyr_4842 -3.0 -7.6 Phosphoenolpyruvate-protein phosphotransferase compare
Psyr_0919 -3.0 -11.8 Chromosome segregation ATPase-like protein compare
Psyr_3637 -3.0 -13.6 Glycosyl transferase, family 4 compare
Psyr_0198 -3.0 -12.3 Citrate transporter conserved
Psyr_0666 -3.0 -5.2 transport system permease protein compare
Psyr_4740 -3.0 -5.9 thiazole-phosphate synthase compare
Psyr_0044 -3.0 -2.8 transferase hexapeptide repeat protein compare
Psyr_4341 -3.0 -8.4 thiamine-phosphate diphosphorylase compare
Psyr_0168 -2.9 -8.0 Phosphoenolpyruvate carboxykinase (ATP) compare
Psyr_3198 -2.9 -2.7 NADH dehydrogenase subunit B compare
Psyr_2462 -2.9 -5.6 Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region compare
Psyr_0025 -2.9 -6.1 shikimate dehydrogenase compare
Psyr_1251 -2.8 -4.1 quinoprotein compare
Psyr_4408 -2.8 -7.7 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Histidine kinase:Histidine kinase compare
Psyr_0920 -2.8 -15.3 Glycosyl transferase, group 1 compare
Psyr_1247 -2.8 -3.2 conserved hypothetical protein compare
Psyr_0208 -2.8 -8.3 endoribonuclease L-PSP compare
Psyr_1350 -2.8 -4.7 site-2 protease, Metallo peptidase, MEROPS family M50B compare
Psyr_3964 -2.8 -7.5 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal compare
Psyr_4687 -2.8 -5.2 biotin synthase compare
Psyr_4340 -2.8 -7.7 phosphomethylpyrimidine kinase, putative compare
Psyr_4091 -2.8 -6.4 8-oxo-dGTPase compare
Psyr_0914 -2.8 -10.6 Glycosyl transferase, group 1 compare
Psyr_0532 -2.7 -4.4 conserved hypothetical protein compare
Psyr_3965 -2.7 -9.0 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_0667 -2.7 -11.8 Periplasmic binding protein compare
Psyr_4126 -2.7 -13.6 adenylylsulfate kinase / sulfate adenylyltransferase subunit 1 compare
Psyr_0544 -2.7 -11.8 hydroxymethylpyrimidine synthase compare
Psyr_0665 -2.7 -8.6 transport system permease protein compare
Psyr_0826 -2.7 -6.0 glucose-6-phosphate isomerase compare
Psyr_1613 -2.7 -4.2 septum site-determining protein MinC compare
Psyr_2077 -2.6 -6.5 regulatory protein, LysR:LysR, substrate-binding protein compare
Psyr_1040 -2.6 -6.1 RNA polymerase sigma factor, ECF subfamily compare
Psyr_0916 -2.6 -10.0 GDP-mannose 4,6-dehydratase compare
Psyr_3636 -2.5 -11.2 Polysaccharide biosynthesis protein CapD compare
Psyr_0535 -2.5 -3.9 toluene tolerance protein, putative compare
Psyr_3286 -2.4 -9.9 conserved hypothetical protein compare
Psyr_3690 -2.4 -6.3 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase compare
Psyr_0529 -2.4 -3.8 Glycosyl transferase, group 1 compare
Psyr_4362 -2.4 -2.2 Rare lipoprotein A compare
Psyr_4940 -2.4 -2.7 3'(2'),5'-bisphosphate nucleotidase compare
Psyr_0534 -2.4 -13.4 membrane protein, putative compare
Psyr_3008 -2.3 -5.3 Undecaprenyl-diphosphatase compare
Psyr_3564 -2.3 -7.5 arginine succinyltransferase compare
Psyr_1038 -2.3 -9.0 TonB-dependent siderophore receptor compare
Psyr_0937 -2.3 -8.9 mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase (GDP) compare
Psyr_0219 -2.3 -8.8 phosphomannomutase compare
Psyr_0386 -2.3 -3.3 phosphoribosyl-AMP cyclohydrolase compare
Psyr_0385 -2.2 -4.1 phosphoribosyl-ATP pyrophosphatase compare
Psyr_3013 -2.2 -1.8 magnesium chelatase subunit ChlD compare
Psyr_3563 -2.2 -5.8 arginine succinyltransferase compare
Psyr_0524 -2.2 -3.7 Lipopolysaccharide kinase compare
Psyr_0918 -2.2 -7.9 ABC transporter compare
Psyr_2227 -2.2 -3.5 conserved hypothetical protein compare
Psyr_0849 -2.2 -8.7 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_4051 -2.1 -3.5 transcriptional regulator, ArsR family compare
Psyr_4843 -2.1 -4.9 NUDIX hydrolase compare
Psyr_0812 -2.0 -4.4 stress protein compare
Psyr_1645 -2.0 -3.3 phosphate:acyl-[acyl carrier protein] acyltransferase compare
Psyr_2461 -2.0 -2.6 Uncharacterized conserved protein UCP030820 compare
Psyr_4151 -2.0 -1.6 Phosphocarrier HPr protein compare
Psyr_0832 -1.9 -7.9 Two-component sensor kinase CbrA compare
Psyr_2739 -1.9 -4.1 ThiJ/PfpI compare
Psyr_3202 -1.9 -1.2 NADH dehydrogenase subunit G compare
Psyr_3966 -1.9 -10.0 Uncharacterized protein UPF0065 compare
Psyr_4991 -1.9 -2.0 hypothetical protein compare
Psyr_3281 -1.8 -3.3 Glycoside hydrolase, family 3, N-terminal compare
Psyr_4882 -1.8 -6.8 protein translocase subunit secB compare
Psyr_0917 -1.8 -4.4 ABC-2 compare
Psyr_2088 -1.8 -2.4 2-methylaconitate cis-trans isomerase compare
Psyr_2980 -1.8 -3.4 UDP-glucose pyrophosphorylase compare
Psyr_4194 -1.7 -4.2 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal compare
Psyr_4566 -1.7 -8.7 Peptidase M23B compare
Psyr_3638 -1.7 -3.3 UDP-glucose 4-epimerase, putative compare
Psyr_4127 -1.7 -3.3 S23 ribosomal compare
Psyr_1588 -1.7 -3.4 Putative exonuclease, RdgC compare
Psyr_3674 -1.7 -3.1 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase compare
Psyr_0377 -1.7 -6.9 Periplasmic glucan biosynthesis protein, MdoG compare
Psyr_0835 -1.7 -4.0 transcriptional regulator, TraR/DksA family compare
Psyr_3554 -1.6 -1.8 Carbon storage regulator compare
Psyr_0575 -1.6 -2.4 protease FtsH subunit HflC compare
Psyr_3258 -1.6 -3.8 conserved hypothetical protein compare
Psyr_1966 -1.6 -3.3 Peptidase M19, renal dipeptidase compare
Psyr_5132 -1.6 -2.0 Glucose-inhibited division protein A subfamily compare
Psyr_0533 -1.6 -3.5 conserved hypothetical protein compare
Psyr_0378 -1.6 -7.6 Glycosyl transferase, family 2 compare
Psyr_4895 -1.6 -3.5 conserved hypothetical protein compare
Psyr_4018 -1.6 -7.5 Formyltetrahydrofolate deformylase compare
Psyr_1140 -1.6 -3.0 Disulfide bond formation protein DsbB compare
Psyr_3917 -1.5 -9.1 transcriptional regulator, LysR family compare
Psyr_3450 -1.5 -3.8 Hpt compare
Psyr_3567 -1.5 -2.9 L-arginine ABC transporter ATP-binding protein / L-ornithine ABC transporter ATP-binding protein compare
Psyr_3955 -1.5 -4.6 Peptidase S1, chymotrypsin:PDZ/DHR/GLGF compare
Psyr_2855 -1.5 -4.2 methionine synthase (B12-independent) compare
Psyr_4601 -1.5 -3.1 hypothetical protein compare
Psyr_0255 -1.5 -1.8 glutamate-cysteine ligase compare
Psyr_3179 -1.5 -2.7 DNA translocase FtsK compare
Psyr_3199 -1.5 -2.3 NADH dehydrogenase subunit D / NADH dehydrogenase subunit C compare
Psyr_1556 -1.4 -2.3 hypothetical protein compare
Psyr_0060 -1.4 -4.7 Protein of unknown function DUF513 compare
Psyr_0291 -1.4 -4.6 DedA compare
Psyr_0525 -1.4 -4.8 Lipopolysaccharide kinase compare
Psyr_0565 -1.4 -5.2 Protein of unknown function UPF0126 compare
Psyr_4480 -1.4 -2.6 outer membrane transport energization protein TonB compare
Psyr_1910 -1.3 -3.9 VacJ-like lipoprotein compare
Psyr_2854 -1.3 -5.2 conserved hypothetical protein compare
Psyr_1250 -1.3 -2.8 conserved hypothetical protein compare
Psyr_0364 -1.3 -4.6 sodium/proton antiporter, NhaA family compare
Psyr_3213 -1.3 -3.3 Propeptide, PepSY amd peptidase M4 compare
Psyr_1749 -1.2 -4.8 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 compare
Psyr_4813 -1.2 -2.7 Short-chain dehydrogenase/reductase SDR compare
Psyr_3275 -1.2 -6.7 Helix-turn-helix protein RpiR:Sugar isomerase (SIS) compare
Psyr_1599 -1.2 -8.1 C-terminal processing peptidase-1, Serine peptidase, MEROPS family S41A compare
Psyr_0268 -1.2 -2.3 DSBA oxidoreductase compare
Psyr_3324 -1.2 -3.5 transcriptional regulator, TetR family compare
Psyr_3040 -1.2 -3.0 conserved hypothetical protein compare
Psyr_5135 -1.2 -1.2 Protein of unknown function DUF37 compare
Psyr_3673 -1.2 -2.0 Phosphoglycerate/bisphosphoglycerate mutase compare
Psyr_3954 -1.1 -3.9 GTP-binding protein LepA compare
Psyr_4140 -1.1 -1.5 Protein of unknown function DUF140 compare
Psyr_4159 -1.1 -5.3 RNAse G compare
Psyr_4089 -1.1 -4.4 PAS compare
Psyr_0395 -1.1 -2.5 HslV component of HslUV peptidase, Threonine peptidase, MEROPS family T01B compare
Psyr_4125 -1.1 -3.1 Protein of unknown function DUF1043 compare
Psyr_1747 -1.1 -3.1 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_3208 -1.1 -1.7 NADH dehydrogenase subunit M compare
Psyr_3947 -1.1 -1.7 Methyltransferase, putative compare
Psyr_1751 -1.1 -2.7 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_3193 -1.1 -1.8 Transcription factor jumonji, jmjC compare
Psyr_2747 -1.1 -2.8 amino acid/amide ABC transporter substrate-binding protein, HAAT family compare
Psyr_1667 -1.1 -4.2 Colicin V production protein compare
Psyr_0373 -1.1 -2.5 CDS compare
Psyr_1937 -1.1 -2.3 UspA compare
Psyr_0815 -1.1 -4.3 nicotinate-nucleotide pyrophosphorylase (carboxylating) compare
Psyr_5133 -1.1 -2.5 tRNA modification GTPase trmE compare
Psyr_4116 -1.0 -1.9 Transport-associated protein compare
Psyr_3562 -1.0 -3.2 succinylglutamic semialdehyde dehydrogenase compare
Psyr_1970 -1.0 -3.7 Secretion protein HlyD compare
Psyr_1121 -1.0 -1.3 6-phosphogluconolactonase compare
Psyr_1963 -1.0 -4.3 Cyclic peptide transporter compare
Psyr_3695 -1.0 -5.9 RelA/SpoT protein compare
Psyr_3896 -1.0 -1.7 BFD-like [2Fe-2S]-binding region compare
Psyr_2540 -1.0 -1.8 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal compare
Psyr_3476 -1.0 -2.1 Flagellar basal body rod protein:Protein of unknown function DUF1078 compare
Psyr_0475 -1.0 -1.8 Protein of unknown function YGGT compare
Psyr_2087 -1.0 -4.0 aconitase / 2-methylcitrate dehydratase (trans-methylaconitate-forming) compare


Specific Phenotypes

For 19 genes in this experiment

For carbon source Citric Acid in Pseudomonas syringae pv. syringae B728a

For carbon source Citric Acid across organisms