Experiment set7IT020 for Bacteroides thetaiotaomicron VPI-5482

Compare to:

Varel_Bryant medium with Dimethyl Sulfoxide 2 vol%

200 most detrimental genes:

  gene name fitness t score description  
BT4646 +1.6 2.7 conserved hypothetical protein (NCBI ptt file) compare
BT0151 +1.5 1.9 hypothetical protein (NCBI ptt file) compare
BT3197 +1.3 1.4 hypothetical protein (NCBI ptt file) compare
BT1557 +1.3 2.5 hypothetical protein (NCBI ptt file) compare
BT3642 +1.2 8.4 Na+-dependent transporter (NCBI ptt file) compare
BT0783 +1.1 1.7 hypothetical protein (NCBI ptt file) compare
BT0925 +1.1 2.6 ABC transporter, ATP-binding protein (NCBI ptt file) compare
BT1558 +1.0 4.0 hypothetical protein (NCBI ptt file) compare
BT4685 +0.9 2.8 hypothetical protein (NCBI ptt file) compare
BT1524 +0.9 1.8 hypothetical protein (NCBI ptt file) compare
BT3503 +0.9 1.6 glutaminase A (NCBI ptt file) compare
BT0885 +0.9 1.8 putative cation efflux pump (NCBI ptt file) compare
BT1427 +0.9 3.3 tetracycline resistance element mobilization regulatory protein rteC (NCBI ptt file) compare
BT0817 +0.8 2.1 lipoprotein, function unknown (NCBI ptt file) compare
BT0476 +0.8 1.8 D-mannose-1-phosphate guanyltransferase (NCBI ptt file) compare
BT1189 +0.8 2.3 conserved hypothetical protein (NCBI ptt file) compare
BT1197 +0.8 2.1 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT0928 +0.8 2.3 two-component system response regulator (NCBI ptt file) compare
BT1169 +0.8 1.5 hypothetical protein (NCBI ptt file) compare
BT0842 +0.8 1.6 hypothetical protein (NCBI ptt file) compare
BT1868 +0.8 1.2 conserved hypothetical protein (NCBI ptt file) compare
BT0376 +0.8 1.2 putative transcriptional regulator (NCBI ptt file) compare
BT0193 +0.8 1.7 conserved hypothetical protein (NCBI ptt file) compare
BT1286 +0.7 4.7 putative two-component system response regulator (NCBI ptt file) compare
BT3974 +0.7 4.4 conserved hypothetical protein (NCBI ptt file) compare
BT2685 +0.7 2.1 hypothetical protein (NCBI ptt file) compare
BT1186 +0.7 2.1 ABC transporter ATP-binding protein (NCBI ptt file) compare
BT0389 +0.7 1.8 putative galactoside acetyltransferase (NCBI ptt file) compare
BT0609 +0.7 2.8 glycosyltransferase (NCBI ptt file) compare
BT1793 +0.7 2.1 integrase protein (NCBI ptt file) compare
BT2042 +0.7 1.3 tRNA and rRNA cytosine-C5-methylase (NCBI ptt file) compare
BT2974 +0.7 1.6 hypothetical protein (NCBI ptt file) compare
BT0584 +0.7 2.1 putative outer membrane protein (NCBI ptt file) compare
BT2430 +0.7 2.9 hexokinase type III (NCBI ptt file) compare
BT2944 +0.7 3.6 putative UDP-N-acetylglucosamine 2-epimerase (NCBI ptt file) compare
BT1441 +0.7 2.9 hypothetical protein (NCBI ptt file) compare
BT1990 +0.7 1.3 hypothetical protein (NCBI ptt file) compare
BT4582 +0.7 3.9 amidophosphoribosyltransferase precursor (NCBI ptt file) compare
BT4384 +0.7 2.2 hypothetical protein (NCBI ptt file) compare
BT1411 +0.7 1.4 methylated-DNA--protein-cysteine methyltransferase (NCBI ptt file) compare
BT4774 +0.6 1.5 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT1321 +0.6 2.3 putative phosphate transport ATP-binding protein (NCBI ptt file) compare
BT4678 +0.6 4.1 L-serine dehydratase (NCBI ptt file) compare
BT0769 +0.6 1.8 conserved hypothetical protein (NCBI ptt file) compare
BT1061 +0.6 2.3 hypothetical protein (NCBI ptt file) compare
BT1431 +0.6 2.4 putative DNA polymerase III epsilon chain (NCBI ptt file) compare
BT0018 +0.6 1.5 hypothetical protein (NCBI ptt file) compare
BT2040 +0.6 2.1 hypothetical protein (NCBI ptt file) compare
BT0115 +0.6 2.1 arsenate reductase (NCBI ptt file) compare
BT3510 +0.6 2.2 hypothetical protein (NCBI ptt file) compare
BT4747 +0.6 2.1 hypothetical protein (NCBI ptt file) compare
BT1519 +0.6 2.6 N-acetylmuramoyl-L-alanine amidase (NCBI ptt file) compare
BT2321 +0.6 2.0 putative integrase (NCBI ptt file) compare
BT0417 +0.6 1.4 hypothetical protein (NCBI ptt file) compare
BT4034 +0.6 1.9 hypothetical protein (NCBI ptt file) compare
BT1033 +0.6 2.4 conserved hypothetical protein (NCBI ptt file) compare
BT1470 +0.6 1.3 putative two-component system sensor histidine kinase (NCBI ptt file) compare
BT0704 +0.6 1.1 phosphoribosylglycinamide formyltransferase 2 (NCBI ptt file) compare
BT1516 +0.6 1.7 replicative DNA helicase (NCBI ptt file) compare
BT2875 +0.6 2.5 serine O-acetyltransferase (NCBI ptt file) compare
BT1982 +0.6 1.2 hypothetical protein (NCBI ptt file) compare
BT1263 +0.6 0.9 putative protease I (NCBI ptt file) compare
BT1229 +0.6 0.8 conserved hypothetical protein, putative membrane protein (NCBI ptt file) compare
BT1367 +0.6 1.4 hydrolase, metal-dependent (NCBI ptt file) compare
BT0223 +0.6 1.6 two-component system response regulator (NCBI ptt file) compare
BT0887 +0.6 1.2 conserved hypothetical protein (NCBI ptt file) compare
BT1862 +0.6 2.7 hypothetical protein (NCBI ptt file) compare
BT1230 +0.5 1.1 hypothetical protein (NCBI ptt file) compare
BT4676 +0.5 1.9 putative periplasmic protein (NCBI ptt file) compare
BT0877 +0.5 0.8 ferredoxin domain containing protein (NCBI ptt file) compare
BT1657 +0.5 1.8 integrase (NCBI ptt file) compare
BT1232 +0.5 0.9 hypothetical protein (NCBI ptt file) compare
BT3847 +0.5 2.2 conserved hypothetical protein (NCBI ptt file) compare
BT2323 +0.5 2.1 conserved hypothetical protein (NCBI ptt file) compare
BT1258 +0.5 1.3 putative acetyltransferase (NCBI ptt file) compare
BT3127 +0.5 2.4 conserved hypothetical protein (NCBI ptt file) compare
BT0327 +0.5 1.1 glutamine ABC transporter, periplasmic glutamine-binding protein (glnH) (NCBI ptt file) compare
BT3971 +0.5 2.0 glutathione peroxidase (NCBI ptt file) compare
BT2633 +0.5 2.2 hypothetical protein (NCBI ptt file) compare
BT1450 +0.5 2.5 propionyl-CoA carboxylase beta chain (NCBI ptt file) compare
BT2585 +0.5 1.7 hypothetical protein (NCBI ptt file) compare
BT4598 +0.5 2.0 hypothetical protein (NCBI ptt file) compare
BT0858 +0.5 2.3 conserved hypothetical protein (NCBI ptt file) compare
BT0194 +0.5 2.1 hypothetical protein (NCBI ptt file) compare
BT4317 +0.5 1.6 putative lipoprotein protein (NCBI ptt file) compare
BT0540 +0.5 1.9 putative exopolyphosphatase (NCBI ptt file) compare
BT1933 +0.5 1.4 transposase (NCBI ptt file) compare
BT0462 +0.5 1.5 putative transcriptional regulator (NCBI ptt file) compare
BT0709 +0.5 2.1 hypothetical protein (NCBI ptt file) compare
BT0926 +0.5 2.0 ABC-type transport, permease protein (NCBI ptt file) compare
BT0511 +0.5 1.6 hypothetical protein (NCBI ptt file) compare
BT0746 +0.5 1.7 putative zinc protease (NCBI ptt file) compare
BT1200 +0.5 1.5 hypothetical protein (NCBI ptt file) compare
BT1991 +0.5 1.2 N-acetylmuramoyl-L-alanine amidase (NCBI ptt file) compare
BT4008 +0.5 2.5 conserved hypothetical protein (NCBI ptt file) compare
BT0639 +0.5 1.2 conserved hypothetical protein (NCBI ptt file) compare
BT4501 +0.5 1.6 ribosomal large subunit pseudouridine synthase A (NCBI ptt file) compare
BT4773 +0.5 1.3 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT1137 +0.5 0.9 hypothetical protein (NCBI ptt file) compare
BT1765 +0.5 2.8 levanase precursor (2,6-beta-D-fructofuranosidase) (NCBI ptt file) compare
BT4206 +0.5 0.6 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (NCBI ptt file) compare
BT0828 +0.5 1.0 dTDP-4-dehydrorhamnose 3,5-epimerase (NCBI ptt file) compare
BT3215 +0.5 2.1 conserved hypothetical protein (NCBI ptt file) compare
BT1945 +0.5 1.8 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT0568 +0.5 2.3 hypothetical protein (NCBI ptt file) compare
BT1309 +0.5 1.3 hypothetical protein (NCBI ptt file) compare
BT1257 +0.5 2.3 conserved hypothetical protein (NCBI ptt file) compare
BT2706 +0.5 3.0 methionine aminopeptidase (NCBI ptt file) compare
BT1822 +0.5 2.2 pyruvate dehydrogenase [cytochrome] (NCBI ptt file) compare
BT3242 +0.5 3.4 hypothetical protein (NCBI ptt file) compare
BT0850 +0.5 1.9 putative transcriptional regulator (NCBI ptt file) compare
BT0841 +0.5 2.1 hypothetical protein (NCBI ptt file) compare
BT1175 +0.5 1.8 hypothetical protein (NCBI ptt file) compare
BT2945 +0.5 2.7 UDP-N-acetyl-D-mannosamine dehydrogenase (NCBI ptt file) compare
BT0556 +0.5 1.3 carbamoyl phosphate synthetase III (glutamine-hydrolyzing) (NCBI ptt file) compare
BT3368 +0.5 0.9 putative glycosyltransferase (NCBI ptt file) compare
BT0225 +0.5 1.1 hypothetical protein (NCBI ptt file) compare
BT4469 +0.4 0.8 conserved hypothetical protein (NCBI ptt file) compare
BT3869 +0.4 1.4 conserved hypothetical protein (NCBI ptt file) compare
BT0869 +0.4 0.8 hypothetical protein (NCBI ptt file) compare
BT0797 +0.4 1.0 transcriptional regulator, ArsR family (NCBI ptt file) compare
BT2292 +0.4 1.5 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT0779 +0.4 2.2 hypothetical protein (NCBI ptt file) compare
BT2979 +0.4 2.7 conserved hypothetical protein, putative membrane protein (NCBI ptt file) compare
BT2240 +0.4 1.4 TPR-domain containing protein (NCBI ptt file) compare
BT0183 +0.4 2.9 transglycosylase (NCBI ptt file) compare
BT0699 +0.4 1.1 putative sugar transporter (NCBI ptt file) compare
BT3462 +0.4 1.6 TPR domain protein (NCBI ptt file) compare
BT1713 +0.4 1.2 putative acylneuraminate cytidylyltransferase (NCBI ptt file) compare
BT2057 +0.4 1.4 hypothetical protein (NCBI ptt file) compare
BT1167 +0.4 2.3 conserved hypothetical protein (NCBI ptt file) compare
BT0788 +0.4 1.9 succinyl-CoA synthetase beta chain (NCBI ptt file) compare
BT1455 +0.4 1.3 protein rtcB (NCBI ptt file) compare
BT3198 +0.4 2.0 conserved hypothetical protein (NCBI ptt file) compare
BT4504 +0.4 2.1 conserved hypothetical protein (NCBI ptt file) compare
BT0066 +0.4 1.9 major outer membrane protein OmpA (NCBI ptt file) compare
BT4641 +0.4 1.5 putative acetyltransferase (NCBI ptt file) compare
BT1958 +0.4 0.9 hypothetical protein (NCBI ptt file) compare
BT3821 +0.4 2.5 5,10-methylenetetrahydrofolate reductase (NCBI ptt file) compare
BT1459 +0.4 1.8 putative two-component system sensor histidine kinase, no kinase domain (NCBI ptt file) compare
BT0782 +0.4 0.7 hypothetical protein (NCBI ptt file) compare
BT1242 +0.4 1.4 ABC transporter ATP-binding protein (NCBI ptt file) compare
BT0147 +0.4 1.7 hypothetical protein (NCBI ptt file) compare
BT0516 +0.4 1.2 conserved hypothetical protein (NCBI ptt file) compare
BT1094 +0.4 0.7 hypothetical protein (NCBI ptt file) compare
BT1556 +0.4 1.4 hypothetical protein (NCBI ptt file) compare
BT0005 +0.4 1.8 30S ribosomal protein S17 (NCBI ptt file) compare
BT0681 +0.4 1.2 two-component system sensor histidine kinase (NCBI ptt file) compare
BT0007 +0.4 0.8 hypothetical protein (NCBI ptt file) compare
BT3481 +0.4 1.0 putative glutaminase A (NCBI ptt file) compare
BT2527 +0.4 2.1 uridine kinase (uridine monophosphokinase) (NCBI ptt file) compare
BT0665 +0.4 1.0 hypothetical protein (NCBI ptt file) compare
BT0229 +0.4 1.4 conserved hypothetical protein (NCBI ptt file) compare
BT0600 +0.4 1.8 nucleotide sugar epimerase (NCBI ptt file) compare
BT1291 +0.4 1.5 spermidine/putrescine transport ATP-binding protein (NCBI ptt file) compare
BT1080 +0.4 0.8 hypothetical protein (NCBI ptt file) compare
BT0053 +0.4 1.9 glycosyltransferase (NCBI ptt file) compare
BT0255 +0.4 1.2 hypothetical protein (NCBI ptt file) compare
BT0761 +0.4 2.0 conserved hypothetical protein (NCBI ptt file) compare
BT1505 +0.4 1.3 hypothetical protein (NCBI ptt file) compare
BT0661 +0.4 1.7 hypothetical protein (NCBI ptt file) compare
BT0992 +0.4 1.7 beta-galactosidase (NCBI ptt file) compare
BT1486 +0.4 2.1 hypothetical protein (NCBI ptt file) compare
BT1422 +0.4 1.0 conserved hypothetical protein (NCBI ptt file) compare
p5482_10 +0.4 2.3 hypothetical protein (NCBI) compare
BT0178 +0.4 0.7 hypothetical protein (NCBI ptt file) compare
BT0411 +0.4 1.3 CysQ, sulfite synthesis pathway protein (NCBI ptt file) compare
BT1240 +0.4 1.8 conserved hypothetical protein (NCBI ptt file) compare
BT1656 +0.4 0.9 putative transcriptional regulator (NCBI ptt file) compare
BT1488 +0.4 1.4 hypothetical protein (NCBI ptt file) compare
BT1580 +0.4 0.9 lactoylglutathione lyase (NCBI ptt file) compare
BT1588 +0.4 1.5 conserved hypothetical protein (NCBI ptt file) compare
BT4702 +0.4 0.8 dihydroxynapthoic acid synthetase (NCBI ptt file) compare
BT1428 +0.4 1.6 conserved hypothetical protein (NCBI ptt file) compare
BT2383 +0.4 2.4 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT0752 +0.4 1.3 putative RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT0241 +0.4 0.8 hypothetical protein (NCBI ptt file) compare
BT0781 +0.4 1.5 hypothetical protein (NCBI ptt file) compare
BT0387 +0.4 1.7 NADH dehydrogenase subunit 2 (NCBI ptt file) compare
BT1451 +0.4 1.0 hypothetical protein (NCBI ptt file) compare
BT1439 +0.4 3.0 Outer membrane binding protein for vancomycin (SusD-like) (from data) compare
BT3491 +0.4 1.3 glutaminase A (NCBI ptt file) compare
BT1706 +0.4 1.8 putative N-acetylmuramoyl-L-alanine amidase (NCBI ptt file) compare
BT3886 +0.4 2.2 hypothetical protein (NCBI ptt file) compare
BT1238 +0.4 1.6 putative RNA binding protein with S1 RNA-binding domain (NCBI ptt file) compare
BT0686 +0.4 1.4 putative uracil permease (uracil transporter) (NCBI ptt file) compare
BT0799 +0.4 0.5 hypothetical protein (NCBI ptt file) compare
BT3891 +0.4 0.9 hypothetical protein (NCBI ptt file) compare
BT3284 +0.4 1.5 conserved hypothetical protein (NCBI ptt file) compare
BT2120 +0.4 2.0 transcriptional regulator (NCBI ptt file) compare
BT1926 +0.4 2.6 hypothetical protein (NCBI ptt file) compare
BT1141 +0.4 1.5 cation efflux family protein (NCBI ptt file) compare
BT2445 +0.4 1.3 hypothetical protein (NCBI ptt file) compare
BT1278 +0.4 1.5 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT1031 +0.4 1.5 conserved hypothetical protein (NCBI ptt file) compare
BT0261 +0.4 0.8 hypothetical protein (NCBI ptt file) compare
BT3905 +0.4 1.7 putative alkaline protease aprF (NCBI ptt file) compare
BT1928 +0.4 1.4 transposase (NCBI ptt file) compare
BT0230 +0.4 1.2 conserved hypothetical protein (NCBI ptt file) compare
BT4363 +0.4 1.1 putative alkaline phosphatase (NCBI ptt file) compare


Specific Phenotypes

None in this experiment

For Bacteroides thetaiotaomicron VPI-5482 in stress experiments

For stress Dimethyl Sulfoxide across organisms