Experiment set7IT009 for Methanococcus maripaludis S2

Compare to:

Formate N-free with 2mM Adenosine

200 most important genes:

  gene name fitness t score description  
MMP_RS02235 -3.2 -10.2 CBS domain-containing protein compare
MMP_RS01020 -2.3 -0.9 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS06840 -2.0 -0.8 DNA-directed RNA polymerase subunit N compare
MMP_RS06355 -1.8 -2.5 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS06175 -1.8 -4.6 winged helix-turn-helix transcriptional regulator compare
MMP_RS01005 -1.8 -1.1 riboflavin synthase compare
MMP_RS04900 -1.7 -12.7 hypothetical protein compare
MMP_RS01385 -1.7 -0.5 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS06215 -1.6 -2.3 30S ribosomal protein S6e compare
MMP_RS07555 -1.6 -0.5 monovalent cation/H+ antiporter subunit E compare
MMP_RS06120 -1.6 -1.2 UPF0147 family protein compare
MMP_RS01175 -1.4 -3.1 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS03960 -1.4 -0.7 hypothetical protein compare
MMP_RS00675 -1.4 -0.8 nitroreductase family protein compare
MMP_RS01650 -1.2 -0.6 sulfurtransferase TusA family protein compare
MMP_RS05985 -1.2 -2.5 hypothetical protein compare
MMP_RS05865 -1.2 -2.4 hypothetical protein compare
MMP_RS07765 -1.2 -6.5 sodium:alanine symporter family protein compare
MMP_RS04410 -1.1 -3.7 hypothetical protein compare
MMP_RS03065 -1.1 -1.9 AzlC family ABC transporter permease compare
MMP_RS07840 -1.1 -1.6 ribonuclease III compare
MMP_RS05975 -1.1 -1.0 hypothetical protein compare
MMP_RS01610 -1.1 -1.7 hypothetical protein compare
MMP_RS07635 -1.0 -3.6 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS05500 -1.0 -4.4 2-isopropylmalate synthase compare
MMP_RS08390 -1.0 -3.0 DUF5400 domain-containing protein compare
MMP_RS01745 -1.0 -3.3 AMP phosphorylase compare
MMP_RS04060 -1.0 -4.1 hypothetical protein compare
MMP_RS05085 -1.0 -4.6 AAA family ATPase compare
MMP_RS05080 -1.0 -5.5 acetyl-CoA decarbonylase/synthase complex subunit delta compare
MMP_RS02790 -0.9 -0.7 class III signal peptide-containing protein compare
MMP_RS00395 -0.9 -0.8 MGMT family protein compare
MMP_RS06915 -0.9 -3.4 metallophosphoesterase compare
MMP_RS02675 -0.9 -1.9 hypothetical protein compare
MMP_RS04610 -0.9 -1.6 Dabb family protein compare
MMP_RS07725 -0.9 -2.0 4Fe-4S dicluster domain-containing protein compare
MMP_RS00295 -0.9 -1.2 gamma carbonic anhydrase family protein compare
MMP_RS00655 -0.9 -1.3 hypothetical protein compare
MMP_RS00060 -0.9 -0.9 3-dehydroquinate synthase II compare
MMP_RS08940 -0.9 -0.8 MetS family NSS transporter small subunit compare
MMP_RS05365 -0.9 -1.2 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
MMP_RS06680 -0.9 -5.4 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain compare
MMP_RS03015 -0.8 -3.2 GTP 3' 8-cyclase MoaA compare
MMP_RS01675 -0.8 -0.9 hypothetical protein compare
MMP_RS03445 -0.8 -0.5 methanogenesis marker 17 protein compare
MMP_RS08320 -0.8 -3.0 molybdopterin molybdotransferase MoeA compare
MMP_RS02805 -0.8 -0.8 HEPN domain-containing protein compare
MMP_RS08720 -0.8 -0.8 4Fe-4S binding protein compare
MMP_RS08350 -0.8 -0.5 hypothetical protein compare
MMP_RS05765 -0.8 -2.5 M42 family metallopeptidase compare
MMP_RS04100 -0.8 -2.0 hypothetical protein compare
MMP_RS04605 -0.8 -2.4 cobalt ECF transporter T component CbiQ compare
MMP_RS02010 -0.8 -4.0 PHP domain-containing protein compare
MMP_RS06285 -0.8 -1.4 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS01790 -0.8 -2.9 restriction endonuclease compare
MMP_RS07720 -0.7 -5.0 4Fe-4S binding protein compare
MMP_RS03590 -0.7 -2.5 METTL5 family protein compare
MMP_RS05100 -0.7 -5.4 CO dehydrogenase/acetyl-CoA synthase complex subunit alpha compare
MMP_RS07005 -0.7 -0.3 4Fe-4S binding protein compare
MMP_RS00535 -0.7 -1.2 TIGR00375 family protein compare
MMP_RS05515 -0.7 -3.1 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS04035 -0.7 -1.1 hypothetical protein compare
MMP_RS00685 -0.7 -1.8 2-phospho-L-lactate guanylyltransferase compare
MMP_RS05695 -0.7 -2.8 phospholipase D-like domain-containing protein compare
MMP_RS05110 -0.7 -2.7 16S ribosomal RNA methyltransferase A compare
MMP_RS00080 -0.7 -1.7 RecB-family nuclease compare
MMP_RS03800 -0.7 -1.5 hypothetical protein compare
MMP_RS02605 -0.7 -0.5 MotA/TolQ/ExbB proton channel family protein compare
MMP_RS01055 -0.7 -1.2 hypothetical protein compare
MMP_RS07415 -0.7 -3.0 molybdopterin-guanine dinucleotide biosynthesis protein MobB compare
MMP_RS08930 -0.7 -0.8 hypothetical protein compare
MMP_RS07815 -0.7 -0.6 DUF2120 domain-containing protein compare
MMP_RS05075 -0.7 -4.5 acetyl-CoA decarbonylase/synthase complex subunit gamma compare
MMP_RS08750 -0.7 -1.2 hypothetical protein compare
MMP_RS06350 -0.7 -2.7 HesA/MoeB/ThiF family protein compare
MMP_RS06920 -0.7 -3.4 AAA family ATPase compare
MMP_RS00855 -0.7 -2.5 DUF367 family protein compare
MMP_RS06715 -0.7 -4.7 cache domain-containing protein compare
MMP_RS02965 -0.7 -1.8 carboxymuconolactone decarboxylase family protein compare
MMP_RS02390 -0.6 -2.0 NifB/NifX family molybdenum-iron cluster-binding protein compare
MMP_RS07195 -0.6 -3.3 M20 family metallo-hydrolase compare
MMP_RS08410 -0.6 -2.5 DUF169 domain-containing protein compare
MMP_RS02290 -0.6 -3.3 MBL fold metallo-hydrolase compare
MMP_RS01855 -0.6 -2.6 2-hydroxyacyl-CoA dehydratase family protein compare
MMP_RS05780 -0.6 -2.7 multidrug resistance efflux transporter family protein compare
MMP_RS03555 -0.6 -2.5 transcriptional regulator compare
MMP_RS05090 -0.6 -2.8 CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta compare
MMP_RS08670 -0.6 -1.6 metallophosphoesterase compare
MMP_RS05070 -0.6 -2.8 4Fe-4S dicluster domain-containing protein compare
MMP_RS05095 -0.6 -2.9 CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon compare
MMP_RS08215 -0.6 -1.3 DUF483 domain-containing protein compare
MMP_RS03110 -0.6 -2.1 glycosyltransferase family 2 protein compare
MMP_RS08195 -0.6 -3.4 hypothetical protein compare
MMP_RS00090 -0.6 -1.9 CoA-binding protein compare
MMP_RS02540 -0.6 -2.2 DUF2283 domain-containing protein compare
MMP_RS02300 -0.6 -1.8 NAD(P)H-dependent oxidoreductase compare
MMP_RS07880 -0.6 -2.8 AAA family ATPase compare
MMP_RS06140 -0.6 -2.1 radical SAM protein compare
MMP_RS08240 -0.6 -2.3 methanogenesis marker 16 metalloprotein compare
MMP_RS05965 -0.6 -1.1 carboxymuconolactone decarboxylase family protein compare
MMP_RS07850 -0.6 -1.1 prephenate dehydratase compare
MMP_RS05140 -0.6 -1.1 helix-turn-helix transcriptional regulator compare
MMP_RS03485 -0.6 -1.7 TIGR00267 family protein compare
MMP_RS03840 -0.6 -1.2 hypothetical protein compare
MMP_RS00400 -0.6 -2.1 tributyrin esterase compare
MMP_RS02530 -0.6 -3.0 type II toxin-antitoxin system mRNA interferase toxin RelE/StbE family compare
MMP_RS08310 -0.6 -0.8 TMEM165/GDT1 family protein compare
MMP_RS02045 -0.6 -0.7 tRNA-Met compare
MMP_RS06870 -0.6 -2.1 DedA family protein compare
MMP_RS05055 -0.6 -3.7 DUF166 domain-containing protein compare
MMP_RS05800 -0.6 -2.6 B12-binding domain-containing radical SAM protein compare
MMP_RS05845 -0.6 -0.5 tRNA-intron lyase compare
MMP_RS08725 -0.6 -0.7 Ni/Fe hydrogenase subunit alpha compare
MMP_RS06760 -0.6 -1.4 hypothetical protein compare
MMP_RS03965 -0.6 -0.9 hypothetical protein compare
MMP_RS06700 -0.6 -3.4 hypothetical protein compare
MMP_RS03120 -0.6 -1.3 hypothetical protein compare
MMP_RS06375 -0.6 -1.7 ATP-dependent sacrificial sulfur transferase LarE compare
MMP_RS06895 -0.5 -0.6 selenocysteine-specific translation elongation factor compare
MMP_RS05875 -0.5 -1.9 hydroxyethylthiazole kinase compare
MMP_RS04735 -0.5 -2.3 tautomerase family protein compare
MMP_RS03675 -0.5 -3.2 RimK family alpha-L-glutamate ligase compare
MMP_RS07860 -0.5 -0.3 hypothetical protein compare
MMP_RS06335 -0.5 -1.2 HAD family hydrolase compare
MMP_RS07095 -0.5 -1.5 PspC domain-containing protein compare
MMP_RS08790 -0.5 -0.6 translation initiation factor IF-2 subunit alpha compare
MMP_RS05830 -0.5 -1.1 peptidyl-prolyl cis-trans isomerase compare
MMP_RS08165 -0.5 -0.8 phosphoglycerate dehydrogenase compare
MMP_RS08275 -0.5 -2.7 hypothetical protein compare
MMP_RS04745 -0.5 -2.6 proteasome assembly chaperone family protein compare
MMP_RS02800 -0.5 -2.3 nucleotidyltransferase domain-containing protein compare
MMP_RS02550 -0.5 -1.5 helix-turn-helix transcriptional regulator compare
MMP_RS07640 -0.5 -1.6 mechanosensitive ion channel family protein compare
MMP_RS04695 -0.5 -1.9 selenide water dikinase SelD compare
MMP_RS02000 -0.5 -1.6 radical SAM protein compare
MMP_RS08235 -0.5 -2.0 hypothetical protein compare
MMP_RS06720 -0.5 -2.6 response regulator transcription factor compare
MMP_RS02885 -0.5 -3.2 molybdopterin biosynthesis protein compare
MMP_RS06370 -0.5 -1.2 biotin synthase BioB compare
MMP_RS02770 -0.5 -1.8 hypothetical protein compare
MMP_RS06685 -0.5 -3.1 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS04055 -0.5 -0.6 hypothetical protein compare
MMP_RS05835 -0.5 -0.3 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMP_RS04205 -0.5 -1.8 carboxymuconolactone decarboxylase family protein compare
MMP_RS01110 -0.5 -1.4 FmdE family protein compare
MMP_RS08100 -0.5 -1.5 8-amino-7-oxononanoate synthase compare
MMP_RS08570 -0.5 -2.2 coenzyme F420-0:L-glutamate ligase compare
MMP_RS05510 -0.5 -1.6 Rrf2 family transcriptional regulator compare
MMP_RS01630 -0.5 -1.9 N-glycosylase/DNA lyase compare
MMP_RS00050 -0.5 -2.1 AarF/UbiB family protein compare
MMP_RS02920 -0.5 -3.0 DMT family transporter compare
MMP_RS07525 -0.5 -2.2 4Fe-4S binding protein compare
MMP_RS00720 -0.5 -1.6 metal-dependent hydrolase compare
MMP_RS05490 -0.5 -1.5 IMPACT family protein compare
MMP_RS04295 -0.5 -2.8 CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein compare
MMP_RS05435 -0.4 -1.6 5'/3'-nucleotidase SurE compare
MMP_RS04125 -0.4 -0.8 TetR/AcrR family transcriptional regulator compare
MMP_RS01850 -0.4 -2.1 phosphate ABC transporter substrate-binding protein compare
MMP_RS07605 -0.4 -0.9 diadenylate cyclase compare
MMP_RS02355 -0.4 -0.9 30S ribosomal protein S27ae compare
MMP_RS06860 -0.4 -0.6 4Fe-4S binding protein compare
MMP_RS01870 -0.4 -2.2 acyl-CoA dehydratase activase compare
MMP_RS07445 -0.4 -2.0 helix-turn-helix domain-containing protein compare
MMP_RS03080 -0.4 -0.7 universal stress protein compare
MMP_RS04320 -0.4 -1.9 uroporphyrinogen decarboxylase family protein compare
MMP_RS01780 -0.4 -1.5 TrmJ/YjtD family RNA methyltransferase compare
MMP_RS02835 -0.4 -0.9 CGGC domain-containing protein compare
MMP_RS01375 -0.4 -2.9 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase compare
MMP_RS02170 -0.4 -1.0 CBS domain-containing protein compare
MMP_RS01985 -0.4 -1.4 F420-dependent methylenetetrahydromethanopterin dehydrogenase compare
MMP_RS07550 -0.4 -1.8 L-serine ammonia-lyase iron-sulfur-dependent subunit alpha compare
MMP_RS09020 -0.4 -0.4 hypothetical protein compare
MMP_RS04870 -0.4 -1.6 TIGR02253 family HAD-type hydrolase compare
MMP_RS03220 -0.4 -0.8 RNA 2' 3'-cyclic phosphodiesterase compare
MMP_RS01135 -0.4 -2.7 molybdate ABC transporter substrate-binding protein compare
MMP_RS03085 -0.4 -1.5 endonuclease III compare
MMP_RS01320 -0.4 -1.1 hypothetical protein compare
MMP_RS01380 -0.4 -1.0 PHP domain-containing protein compare
MMP_RS04015 -0.4 -0.8 hypothetical protein compare
MMP_RS07100 -0.4 -1.8 hypothetical protein compare
MMP_RS03480 -0.4 -2.3 SulP family inorganic anion transporter compare
MMP_RS04620 -0.4 -2.2 cobalt transporter CbiM compare
MMP_RS03235 -0.4 -1.4 tRNA pseudouridine(13) synthase TruD compare
MMP_RS03000 -0.4 -2.3 cupin domain-containing protein compare
MMP_RS03550 -0.4 -0.7 DUF2124 domain-containing protein compare
MMP_RS08775 -0.4 -0.8 methanogenesis marker 9 domain-containing protein compare
MMP_RS04815 -0.4 -1.6 chemotaxis protein CheD compare
MMP_RS05950 -0.4 -1.4 nickel-dependent hydrogenase large subunit compare
MMP_RS02545 -0.4 -1.2 hypothetical protein compare
MMP_RS01440 -0.4 -1.3 NAAT family transporter compare
MMP_RS02680 -0.4 -1.2 ABC transporter permease compare
MMP_RS00620 -0.4 -1.2 4Fe-4S binding protein compare
MMP_RS01965 -0.4 -1.5 DUF1616 domain-containing protein compare
MMP_RS05065 -0.4 -0.7 CooT family nickel-binding protein compare
MMP_RS03105 -0.4 -2.1 radical SAM protein compare
MMP_RS07650 -0.4 -1.6 TldD/PmbA family protein compare
MMP_RS01475 -0.4 -1.6 phosphosulfolactate synthase compare
MMP_RS01150 -0.4 -1.1 aldo/keto reductase compare
MMP_RS05170 -0.4 -1.1 lysine exporter LysO family protein compare
MMP_RS02370 -0.4 -1.0 NifB/NifX family molybdenum-iron cluster-binding protein compare


Specific Phenotypes

For 2 genes in this experiment

For nitrogen source Adenosine in Methanococcus maripaludis S2

For nitrogen source Adenosine across organisms