Experiment set7IT009 for Methanococcus maripaludis S2

Compare to:

Formate N-free with 2mM Adenosine

200 most detrimental genes:

  gene name fitness t score description  
MMP_RS02225 +13.3 98.5 carbohydrate kinase family protein compare
MMP_RS01370 +7.2 38.5 acetate--CoA ligase family protein compare
MMP_RS00830 +5.5 27.2 purine phosphoribosyltransferase family protein compare
MMP_RS00900 +3.3 10.0 50S ribosomal protein L39e compare
MMP_RS07115 +3.3 14.0 MBL fold metallo-hydrolase compare
MMP_RS05920 +3.2 1.9 50S ribosomal protein L37e compare
MMP_RS03610 +3.0 10.9 NCS2 family permease compare
MMP_RS03215 +2.5 9.3 MBL fold metallo-hydrolase compare
MMP_RS08660 +2.4 5.1 DHH family phosphoesterase compare
MMP_RS00110 +2.3 4.5 hypothetical protein compare
MMP_RS07755 +1.9 2.2 DUF555 domain-containing protein compare
MMP_RS08785 +1.9 2.4 RNA-protein complex protein Nop10 compare
MMP_RS07390 +1.8 4.6 cell division protein FtsZ compare
MMP_RS08435 +1.8 3.3 Era-like GTP-binding protein compare
MMP_RS03465 +1.8 2.8 adenine phosphoribosyltransferase compare
MMP_RS06230 +1.7 4.6 helix-turn-helix domain-containing protein compare
MMP_RS06885 +1.7 3.7 50S ribosome-binding GTPase compare
MMP_RS02145 +1.7 6.9 winged helix-turn-helix transcriptional regulator compare
MMP_RS01905 +1.6 9.9 glycosyltransferase compare
MMP_RS04720 +1.6 5.6 DedA family protein compare
MMP_RS05815 +1.6 4.2 NOL1/NOP2/sun family putative RNA methylase compare
MMP_RS03385 +1.5 2.0 cation diffusion facilitator family transporter compare
MMP_RS07750 +1.5 5.0 DUF357 domain-containing protein compare
MMP_RS05925 +1.5 5.9 small nuclear ribonucleoprotein compare
MMP_RS05295 +1.5 5.5 minichromosome maintenance protein MCM compare
MMP_RS00450 +1.5 2.4 4Fe-4S binding protein compare
MMP_RS01540 +1.4 4.2 DUF504 domain-containing protein compare
MMP_RS08440 +1.4 3.0 cell division protein SepF compare
MMP_RS01875 +1.3 6.2 N-acetyltransferase compare
MMP_RS08595 +1.3 1.4 flagellar protein C compare
MMP_RS01895 +1.3 8.4 flippase compare
MMP_RS00880 +1.3 3.6 ribosome assembly RNA-binding protein YhbY compare
MMP_RS07875 +1.2 4.2 hypothetical protein compare
MMP_RS02310 +1.2 2.0 RimK-like ATPgrasp N-terminal domain-containing protein compare
MMP_RS00895 +1.2 2.8 hypothetical protein compare
MMP_RS00915 +1.1 3.6 DUF116 domain-containing protein compare
MMP_RS01240 +1.1 1.2 7-cyano-7-deazaguanine synthase QueC compare
MMP_RS06900 +1.1 2.4 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS01900 +1.1 6.2 hypothetical protein compare
MMP_RS08460 +1.1 2.2 proteasome-activating nucleotidase compare
MMP_RS06940 +1.0 3.7 polyprenyl diphosphate synthase compare
MMP_RS00480 +1.0 1.9 hypothetical protein compare
MMP_RS08155 +1.0 3.4 hypothetical protein compare
MMP_RS06310 +1.0 3.0 NAD(P)/FAD-dependent oxidoreductase compare
MMP_RS06555 +1.0 2.8 cupin domain-containing protein compare
MMP_RS07425 +1.0 3.2 GTP-binding protein compare
MMP_RS06535 +1.0 2.8 2-oxoacid:acceptor oxidoreductase family protein compare
MMP_RS00305 +1.0 1.3 phosphoribosyl-ATP diphosphatase compare
MMP_RS04890 +0.9 1.0 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS02480 +0.9 1.9 hypothetical protein compare
MMP_RS03475 +0.9 0.7 hypothetical protein compare
MMP_RS06110 +0.9 2.2 ATP-dependent protease LonB compare
MMP_RS03395 +0.9 3.4 hypothetical protein compare
MMP_RS00320 +0.9 1.8 class I SAM-dependent methyltransferase compare
MMP_RS03315 +0.9 1.2 ferrous iron transport protein A compare
MMP_RS02500 +0.9 1.5 minichromosome maintenance protein MCM compare
MMP_RS05535 +0.9 2.4 hypothetical protein compare
MMP_RS01600 +0.9 0.9 50S ribosomal protein L15e compare
MMP_RS01140 +0.8 2.1 molybdate ABC transporter permease subunit compare
MMP_RS01685 +0.8 1.3 indolepyruvate oxidoreductase subunit beta compare
MMP_RS08915 +0.8 2.7 2 5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase compare
MMP_RS04090 +0.8 1.7 hypothetical protein compare
MMP_RS08175 +0.8 4.1 7-cyano-7-deazaguanine synthase compare
MMP_RS05250 +0.8 1.3 NFYB/HAP3 family transcription factor subunit compare
MMP_RS04685 +0.8 2.2 DUF126 domain-containing protein compare
MMP_RS06725 +0.8 4.3 hypothetical protein compare
MMP_RS08975 +0.8 2.0 hypothetical protein compare
MMP_RS01925 +0.8 3.3 DUF1616 domain-containing protein compare
MMP_RS04710 +0.8 1.3 hypothetical protein compare
MMP_RS07410 +0.8 4.9 4-demethylwyosine synthase TYW1 compare
MMP_RS06550 +0.8 3.4 AMP-binding protein compare
MMP_RS04520 +0.8 1.7 nucleoside deaminase compare
MMP_RS01910 +0.8 3.8 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMP_RS07820 +0.8 2.1 UPF0104 family protein compare
MMP_RS01955 +0.8 1.6 hypothetical protein compare
MMP_RS04195 +0.8 1.8 flavodoxin compare
MMP_RS03995 +0.7 2.7 flippase-like domain-containing protein compare
MMP_RS01960 +0.7 0.8 hypothetical protein compare
MMP_RS00750 +0.7 1.5 fumarate hydratase compare
MMP_RS07580 +0.7 1.7 DUF356 domain-containing protein compare
MMP_RS06395 +0.7 1.3 ThiF family adenylyltransferase compare
MMP_RS06670 +0.7 2.4 glucose-6-phosphate isomerase compare
MMP_RS09010 +0.7 3.0 hypothetical protein compare
MMP_RS02245 +0.7 1.7 hypothetical protein compare
MMP_RS09050 +0.7 1.6 CAP domain-containing protein compare
MMP_RS05525 +0.7 2.1 calcium/sodium antiporter compare
MMP_RS01700 +0.7 0.5 dihydroxy-acid dehydratase compare
MMP_RS07695 +0.7 2.1 DUF3236 domain-containing protein compare
MMP_RS01725 +0.7 1.7 class I SAM-dependent methyltransferase family protein compare
MMP_RS06315 +0.7 0.5 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS06490 +0.7 2.2 hypothetical protein compare
MMP_RS00810 +0.7 3.1 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS00635 +0.7 1.1 energy-coupling factor transporter transmembrane protein EcfT compare
MMP_RS06980 +0.7 2.8 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMP_RS02900 +0.7 0.3 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS02135 +0.7 1.7 DUF5612 domain-containing protein compare
MMP_RS00560 +0.6 2.9 cation:proton antiporter compare
MMP_RS04475 +0.6 2.4 nitrogen fixation compare
MMP_RS04740 +0.6 2.6 DUF473 domain-containing protein compare
MMP_RS06290 +0.6 1.9 DNA repair and recombination protein RadA compare
MMP_RS07955 +0.6 2.4 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS09035 +0.6 1.7 hypothetical protein compare
MMP_RS02110 +0.6 1.2 hypothetical protein compare
MMP_RS08535 +0.6 3.1 bis-aminopropyl spermidine synthase family protein compare
MMP_RS08600 +0.6 1.2 flagellar protein D compare
MMP_RS02985 +0.6 1.0 hypothetical protein compare
MMP_RS04485 +0.6 2.9 putative beta-lysine N-acetyltransferase compare
MMP_RS03390 +0.6 2.0 malate dehydrogenase compare
MMP_RS01030 +0.6 1.7 MTAP family purine nucleoside phosphorylase compare
MMP_RS05345 +0.6 2.5 hypothetical protein compare
MMP_RS01880 +0.6 2.6 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS01800 +0.6 1.4 TIGR00303 family protein compare
MMP_RS00930 +0.6 1.8 ABC transporter permease compare
MMP_RS00310 +0.6 2.8 CBS domain-containing protein compare
MMP_RS00235 +0.6 2.5 HDIG domain-containing protein compare
MMP_RS09025 +0.5 0.5 hypothetical protein compare
MMP_RS07380 +0.5 0.7 transcription elongation factor Spt5 compare
MMP_RS01915 +0.5 3.9 DUF354 domain-containing protein compare
MMP_RS01580 +0.5 1.9 PQQ-binding-like beta-propeller repeat protein compare
MMP_RS08455 +0.5 1.5 multiprotein bridging factor aMBF1 compare
MMP_RS00325 +0.5 0.6 RNA-binding protein compare
MMP_RS08995 +0.5 0.7 hypothetical protein compare
MMP_RS01920 +0.5 4.0 glycosyltransferase family 2 protein compare
MMP_RS08585 +0.5 2.5 flagellin compare
MMP_RS08330 +0.5 1.7 NADH-quinone oxidoreductase subunit H compare
MMP_RS08620 +0.5 2.1 flagellar accessory protein FlaH compare
MMP_RS05970 +0.5 2.1 class II SORL domain-containing protein compare
MMP_RS07355 +0.5 0.5 transcription factor S compare
MMP_RS08650 +0.5 1.1 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS02490 +0.5 1.3 hypothetical protein compare
MMP_RS04970 +0.5 3.3 F420-dependent thioredoxin reductase compare
MMP_RS00300 +0.5 0.3 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS04775 +0.5 1.2 adenosylhomocysteinase compare
MMP_RS05945 +0.5 1.7 CBS domain-containing protein compare
MMP_RS06875 +0.5 2.3 FAD-dependent oxidoreductase compare
MMP_RS01470 +0.5 1.1 ATP-binding cassette domain-containing protein compare
MMP_RS00850 +0.5 1.7 TIGR01177 family methyltransferase compare
MMP_RS08385 +0.5 1.5 ABC transporter substrate-binding protein compare
MMP_RS04310 +0.5 1.9 hypothetical protein compare
MMP_RS05990 +0.5 1.2 DsrE family protein compare
MMP_RS00795 +0.5 0.8 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS04690 +0.5 1.0 class III signal peptide-containing protein compare
MMP_RS01950 +0.5 2.8 hypothetical protein compare
MMP_RS07900 +0.5 0.7 YeeE/YedE family protein compare
MMP_RS03435 +0.5 0.5 ketol-acid reductoisomerase compare
MMP_RS06650 +0.5 1.5 glycoside hydrolase family 57 protein compare
MMP_RS00335 +0.5 1.1 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMP_RS03700 +0.5 1.9 sodium:proton antiporter compare
MMP_RS01195 +0.5 0.5 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS01935 +0.4 2.6 DUF58 domain-containing protein compare
MMP_RS04265 +0.4 1.5 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS04985 +0.4 0.8 DUF2180 family protein compare
MMP_RS01080 +0.4 1.1 DUF2202 domain-containing protein compare
MMP_RS00740 +0.4 1.0 cyclase family protein compare
MMP_RS06575 +0.4 0.8 fluoride efflux transporter CrcB compare
MMP_RS06865 +0.4 1.0 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMP_RS07895 +0.4 1.2 cytochrome c compare
MMP_RS01260 +0.4 1.3 HDIG domain-containing protein compare
MMP_RS07075 +0.4 1.5 phosphomannomutase/phosphoglucomutase compare
MMP_RS03425 +0.4 1.8 hypothetical protein compare
MMP_RS05245 +0.4 1.5 archaeosine biosynthesis radical SAM protein RaSEA compare
MMP_RS05325 +0.4 1.9 hypothetical protein compare
MMP_RS03100 +0.4 1.2 hypothetical protein compare
MMP_RS00910 +0.4 2.1 2-phosphosulfolactate phosphatase compare
MMP_RS03245 +0.4 1.0 DNA repair and recombination protein RadB compare
MMP_RS06485 +0.4 0.4 zinc ribbon domain-containing protein compare
MMP_RS08890 +0.4 2.6 glycosyltransferase family 4 protein compare
MMP_RS03770 +0.4 2.1 hydroxylamine reductase compare
MMP_RS08705 +0.4 1.6 sulfopyruvate decarboxylase subunit beta compare
MMP_RS02340 +0.4 0.7 DNA-directed RNA polymerase subunit E'' compare
MMP_RS01865 +0.4 0.6 GPR1/FUN34/YaaH family transporter compare
MMP_RS06130 +0.4 0.9 peptidylprolyl isomerase compare
MMP_RS01990 +0.4 1.0 hypothetical protein compare
MMP_RS01975 +0.4 2.7 hypothetical protein compare
MMP_RS01465 +0.4 0.6 hypothetical protein compare
MMP_RS01885 +0.4 2.0 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS06975 +0.4 0.7 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS05700 +0.4 2.0 TfuA-related McrA-glycine thioamidation protein compare
MMP_RS05640 +0.4 1.6 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS01720 +0.4 0.7 replication factor C large subunit compare
MMP_RS06385 +0.4 0.9 hypothetical protein compare
MMP_RS02265 +0.4 0.9 nitroreductase family protein compare
MMP_RS07570 +0.4 1.9 nucleotidyltransferase family protein compare
MMP_RS04955 +0.4 1.5 DNA topoisomerase I compare
MMP_RS02935 +0.4 1.1 A24 family peptidase compare
MMP_RS00865 +0.4 0.9 SLC13 family permease compare
MMP_RS03095 +0.4 1.2 diphthine synthase compare
MMP_RS06365 +0.4 0.8 hypothetical protein compare
MMP_RS08880 +0.4 2.2 hypothetical protein compare
MMP_RS08635 +0.4 0.5 UbiA family prenyltransferase compare
MMP_RS08645 +0.4 1.3 UPF0179 family protein compare
MMP_RS01525 +0.4 0.6 nucleoside-diphosphate kinase compare
MMP_RS08230 +0.4 1.2 50S ribosomal protein L11 methyltransferase compare
MMP_RS00940 +0.4 1.6 daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein compare
MMP_RS08655 +0.4 2.0 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS07090 +0.4 1.9 tRNA (adenine-N1)-methyltransferase compare
MMP_RS03765 +0.4 1.1 CopG family ribbon-helix-helix protein compare
MMP_RS08300 +0.4 0.2 metal-sulfur cluster assembly factor compare
MMP_RS06495 +0.3 0.9 YkgJ family cysteine cluster protein compare
MMP_RS06280 +0.3 1.4 alpha-glucan family phosphorylase compare


Specific Phenotypes

For 2 genes in this experiment

For nitrogen source Adenosine in Methanococcus maripaludis S2

For nitrogen source Adenosine across organisms