Experiment set7IT009 for Klebsiella michiganensis M5al

Compare to:

LB with Sodium nitrite 40 mM

200 most important genes:

  gene name fitness t score description  
BWI76_RS01210 -5.8 -4.1 tyrosine recombinase XerC compare
BWI76_RS09645 -4.9 -2.0 thioredoxin-disulfide reductase compare
BWI76_RS17720 -4.9 -2.0 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS02530 -3.8 -3.7 tRNA dimethylallyltransferase compare
BWI76_RS23230 -3.6 -3.5 exodeoxyribonuclease V subunit beta compare
BWI76_RS16635 -3.5 -4.7 carbonate dehydratase compare
BWI76_RS09660 -3.2 -3.4 DNA translocase FtsK compare
BWI76_RS14915 -3.0 -3.3 hypothetical protein compare
BWI76_RS23240 -2.7 -4.8 exonuclease V subunit gamma compare
BWI76_RS01385 -2.3 -3.2 potassium transporter compare
BWI76_RS22625 -2.2 -2.8 transcriptional regulator compare
BWI76_RS08430 -2.2 -5.3 succinate--CoA ligase subunit alpha compare
BWI76_RS20135 -2.1 -3.5 NADH-quinone oxidoreductase subunit M compare
BWI76_RS08210 -2.1 -2.1 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS26620 -2.1 -1.6 Fe-S biogenesis protein NfuA compare
BWI76_RS08425 -2.0 -4.7 succinyl-CoA ligase subunit beta compare
BWI76_RS13420 -2.0 -2.8 ABC transporter permease compare
BWI76_RS02410 -2.0 -2.3 EF-P beta-lysylation protein EpmB compare
BWI76_RS08980 -1.9 -1.7 DNA starvation/stationary phase protection protein compare
BWI76_RS16955 -1.9 -1.5 hypothetical protein compare
BWI76_RS04510 -1.8 -3.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS19035 -1.7 -7.2 dTDP-rhamnosyl transferase compare
BWI76_RS21070 -1.7 -1.6 outer membrane protein assembly factor BamB compare
BWI76_RS04715 -1.7 -1.8 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS05840 -1.7 -3.8 glutamate 5-kinase compare
BWI76_RS21075 -1.7 -1.8 membrane protein compare
BWI76_RS19010 -1.6 -3.2 polysaccharide pyruvyl transferase yvff compare
BWI76_RS14410 -1.6 -2.3 hypothetical protein compare
BWI76_RS00715 -1.6 -3.2 two-component sensor histidine kinase compare
BWI76_RS20160 -1.6 -3.1 NADH-quinone oxidoreductase subunit H compare
BWI76_RS08525 -1.6 -2.2 colicin transporter compare
BWI76_RS16965 -1.5 -3.6 murein lipoprotein compare
BWI76_RS21450 -1.5 -2.1 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS26570 -1.5 -2.8 anion permease compare
BWI76_RS21310 -1.5 -1.3 DNA repair protein RecO compare
BWI76_RS15990 -1.5 -5.2 serine protease compare
BWI76_RS16275 -1.5 -2.6 fumarate hydratase FumA compare
BWI76_RS13275 -1.5 -2.3 hypothetical protein compare
BWI76_RS12145 -1.5 -1.4 hypothetical protein compare
BWI76_RS15835 -1.5 -1.7 hypothetical protein compare
BWI76_RS01350 -1.4 -1.1 NAD(P)H-flavin reductase compare
BWI76_RS06680 -1.4 -1.2 hypothetical protein compare
BWI76_RS13980 -1.4 -1.5 hypothetical protein compare
BWI76_RS27165 -1.4 -3.9 mannitol-1-phosphate 5-dehydrogenase compare
BWI76_RS05835 -1.4 -1.9 gamma-glutamyl-phosphate reductase compare
BWI76_RS05570 -1.4 -1.2 hypothetical protein compare
BWI76_RS25335 -1.4 -3.6 stringent starvation protein A compare
BWI76_RS08390 -1.4 -3.4 hypothetical protein compare
BWI76_RS15060 -1.3 -2.6 MarR family transcriptional regulator compare
BWI76_RS20130 -1.3 -4.2 NADH-quinone oxidoreductase subunit N compare
BWI76_RS14390 -1.3 -1.6 hypothetical protein compare
BWI76_RS24585 -1.3 -2.2 glycerol dehydrogenase compare
BWI76_RS00400 -1.3 -1.0 glutamine synthetase compare
BWI76_RS16315 -1.3 -1.4 SirA-like protein compare
BWI76_RS04530 -1.2 -2.5 peptidylprolyl isomerase SurA compare
BWI76_RS05810 -1.2 -1.4 hypothetical protein compare
BWI76_RS11255 -1.2 -1.4 putrescine/spermidine ABC transporter ATP-binding protein compare
BWI76_RS20145 -1.2 -1.6 NADH-quinone oxidoreductase subunit K compare
BWI76_RS21980 -1.2 -1.6 hypothetical protein compare
BWI76_RS07725 -1.2 -1.1 iron-enterobactin transporter permease compare
BWI76_RS26575 -1.1 -2.2 universal stress protein B compare
BWI76_RS08385 -1.1 -2.4 citrate (Si)-synthase compare
BWI76_RS06470 -1.1 -1.8 hypothetical protein compare
BWI76_RS03105 -1.1 -1.0 myo-inosose-2 dehydratase compare
BWI76_RS04875 -1.1 -4.4 transcriptional regulator PdhR compare
BWI76_RS10920 -1.1 -2.2 putative TetR family transcriptional regulator compare
BWI76_RS01115 -1.1 -1.9 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS11435 -1.1 -1.6 hypothetical protein compare
BWI76_RS01110 -1.1 -3.9 TDP-fucosamine acetyltransferase compare
BWI76_RS16425 -1.0 -1.4 hypothetical protein compare
BWI76_RS08405 -1.0 -1.7 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS21370 -1.0 -1.8 ATP-dependent RNA helicase SrmB compare
BWI76_RS20165 -1.0 -3.1 NADH-quinone oxidoreductase subunit G compare
BWI76_RS15680 -1.0 -2.6 hypothetical protein compare
BWI76_RS17400 -1.0 -1.2 transporter compare
BWI76_RS06340 -1.0 -1.1 hypothetical protein compare
BWI76_RS18915 -1.0 -2.4 NAD(P)-dependent oxidoreductase compare
BWI76_RS14615 -1.0 -1.1 hypothetical protein compare
BWI76_RS04955 -1.0 -1.4 hypoxanthine phosphoribosyltransferase compare
BWI76_RS09970 -1.0 -1.2 porin OmpA compare
BWI76_RS24900 -0.9 -1.2 DeoR family transcriptional regulator compare
BWI76_RS20190 -0.9 -2.6 NADH-quinone oxidoreductase subunit A compare
BWI76_RS13435 -0.9 -1.1 hypothetical protein compare
BWI76_RS15000 -0.9 -2.4 amino acid ABC transporter ATP-binding protein compare
BWI76_RS11810 -0.9 -1.4 outer membrane protein OmpW compare
BWI76_RS21715 -0.9 -1.6 transcriptional regulator compare
BWI76_RS23455 -0.9 -1.2 Na(+)-translocating NADH-quinone reductase subunit E compare
BWI76_RS23530 -0.9 -3.0 MarR family transcriptional regulator compare
BWI76_RS05260 -0.9 -1.6 chaperone compare
BWI76_RS15635 -0.9 -3.3 hypothetical protein compare
BWI76_RS20150 -0.9 -1.4 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS18125 -0.9 -1.4 murein DD-endopeptidase MepM compare
BWI76_RS11410 -0.9 -1.5 leucine efflux protein compare
BWI76_RS10955 -0.9 -1.6 hypothetical protein compare
BWI76_RS19040 -0.9 -2.8 hypothetical protein compare
BWI76_RS20360 -0.9 -0.9 cell division protein DedD compare
BWI76_RS15300 -0.9 -2.2 multiple antibiotic resistance regulatory periplasmic protein MarB compare
BWI76_RS13545 -0.9 -1.1 N-acetyltransferase compare
BWI76_RS06560 -0.9 -2.0 7-cyano-7-deazaguanine synthase QueC compare
BWI76_RS02880 -0.9 -2.7 membrane protein compare
BWI76_RS20170 -0.9 -2.1 NADH-quinone oxidoreductase subunit F compare
BWI76_RS00720 -0.9 -1.2 DNA-binding response regulator compare
BWI76_RS23340 -0.9 -1.8 transcriptional regulator compare
BWI76_RS23265 -0.9 -2.4 hypothetical protein compare
BWI76_RS23480 -0.8 -5.1 EAL domain-containing protein compare
BWI76_RS23885 -0.8 -1.3 2-octaprenylphenol hydroxylase compare
BWI76_RS06730 -0.8 -1.2 lac repressor compare
BWI76_RS26455 -0.8 -2.2 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS12450 -0.8 -2.7 phage shock protein PspA compare
BWI76_RS12665 -0.8 -2.0 hypothetical protein compare
BWI76_RS27620 -0.8 -2.4 hypothetical protein compare
BWI76_RS24945 -0.8 -0.9 glutamine amidotransferase compare
BWI76_RS09610 -0.8 -2.3 ATP-dependent Clp protease adaptor ClpS compare
BWI76_RS08395 -0.8 -1.5 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS06910 -0.8 -0.9 transcriptional regulator compare
BWI76_RS21685 -0.8 -0.9 hypothetical protein compare
BWI76_RS16555 -0.8 -1.8 hypothetical protein compare
BWI76_RS26775 -0.8 -2.5 endo-1,4-D-glucanase compare
BWI76_RS08700 -0.8 -2.8 helix-turn-helix-type transcriptional regulator compare
BWI76_RS27940 -0.8 -2.0 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
BWI76_RS15970 -0.8 -1.7 carboxypeptidase M32 compare
BWI76_RS11935 -0.8 -2.5 YmiA family putative membrane protein compare
BWI76_RS06335 -0.8 -1.8 nucleoside-specific channel-forming protein Tsx compare
BWI76_RS11285 -0.8 -1.1 transcriptional regulator compare
BWI76_RS06765 -0.8 -1.6 transcriptional regulator compare
BWI76_RS25870 -0.8 -1.3 elongation factor Tu compare
BWI76_RS15645 -0.8 -3.3 gp6 compare
BWI76_RS18000 -0.8 -2.2 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF compare
BWI76_RS09690 -0.8 -1.4 dimethyl sulfoxide reductase compare
BWI76_RS13590 -0.8 -1.3 hypothetical protein compare
BWI76_RS26980 -0.8 -1.3 cold-shock protein compare
BWI76_RS14870 -0.8 -1.7 hypothetical protein compare
BWI76_RS12855 -0.7 -1.2 enamine deaminase RidA compare
BWI76_RS09255 -0.7 -1.2 hypothetical protein compare
BWI76_RS01185 -0.7 -2.1 adenylate cyclase compare
BWI76_RS12885 -0.7 -1.3 hypothetical protein compare
BWI76_RS20180 -0.7 -2.4 NADH-quinone oxidoreductase subunit C/D compare
BWI76_RS16135 -0.7 -2.1 acetyl-CoA acetyltransferase compare
BWI76_RS09030 -0.7 -4.3 transpeptidase compare
BWI76_RS12545 -0.7 -1.4 hypothetical protein compare
BWI76_RS11150 -0.7 -1.2 membrane protein compare
BWI76_RS20335 -0.7 -1.2 zinc transporter compare
BWI76_RS05120 -0.7 -4.4 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS04270 -0.7 -1.7 transaldolase compare
BWI76_RS15950 -0.7 -1.1 dethiobiotin synthase compare
BWI76_RS02580 -0.7 -0.7 23S rRNA (guanosine(2251)-2'-O)-methyltransferase compare
BWI76_RS20755 -0.7 -2.3 microcompartment protein EutL compare
BWI76_RS12070 -0.7 -0.8 hypothetical protein compare
BWI76_RS00025 -0.7 -0.7 hypothetical protein compare
BWI76_RS20140 -0.7 -2.3 NADH-quinone oxidoreductase subunit L compare
BWI76_RS22450 -0.7 -1.5 selenoprotein W-related protein compare
BWI76_RS17980 -0.7 -1.8 RNA chaperone ProQ compare
BWI76_RS25280 -0.7 -1.2 RNase adaptor protein RapZ compare
BWI76_RS17945 -0.7 -1.0 hypothetical protein compare
BWI76_RS01100 -0.7 -3.3 dTDP-glucose 4,6-dehydratase compare
BWI76_RS11825 -0.7 -2.7 LysR family transcriptional regulator compare
BWI76_RS27735 -0.7 -1.9 hypothetical protein compare
BWI76_RS07985 -0.7 -0.8 fluoride ion transporter CrcB compare
BWI76_RS25505 -0.7 -4.2 RNase E specificity factor CsrD compare
BWI76_RS13370 -0.7 -2.2 hypothetical protein compare
BWI76_RS06485 -0.7 -1.9 cytochrome o ubiquinol oxidase subunit III compare
BWI76_RS09990 -0.7 -2.8 hypothetical protein compare
BWI76_RS23305 -0.7 -1.3 NADP(H)-dependent aldo-keto reductase compare
BWI76_RS00660 -0.7 -3.1 ABC transporter compare
BWI76_RS07730 -0.7 -1.0 iron-enterobactin transporter membrane protein compare
BWI76_RS27430 -0.7 -0.5 (p)ppGpp synthetase compare
BWI76_RS20670 -0.7 -2.8 transcriptional regulator PtsJ compare
BWI76_RS20380 -0.7 -0.9 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS22685 -0.7 -3.0 hypothetical protein compare
BWI76_RS15535 -0.7 -1.9 hypothetical protein compare
BWI76_RS09870 -0.7 -3.0 aromatic amino acid aminotransferase compare
BWI76_RS24850 -0.7 -2.5 DeoR family transcriptional regulator compare
BWI76_RS17070 -0.7 -1.6 phosphoenolpyruvate synthase regulatory protein compare
BWI76_RS15350 -0.7 -0.9 hypothetical protein compare
BWI76_RS14735 -0.7 -2.0 type 11 methyltransferase compare
BWI76_RS01200 -0.7 -1.3 diaminopimelate epimerase compare
BWI76_RS15640 -0.7 -3.4 hypothetical protein compare
BWI76_RS14650 -0.7 -1.7 helix-turn-helix transcriptional regulator compare
BWI76_RS13770 -0.7 -1.8 alkylhydroperoxidase domain protein compare
BWI76_RS12535 -0.6 -1.9 hypothetical protein compare
BWI76_RS15530 -0.6 -1.9 hypothetical protein compare
BWI76_RS15630 -0.6 -2.0 hypothetical protein compare
BWI76_RS15015 -0.6 -1.0 DUF2132 domain-containing protein compare
BWI76_RS15360 -0.6 -1.0 hypothetical protein compare
BWI76_RS08665 -0.6 -2.4 6-phosphogluconolactonase compare
BWI76_RS03180 -0.6 -1.0 phage transcriptional regulator, AlpA compare
BWI76_RS04645 -0.6 -2.8 3-dehydroquinase compare
BWI76_RS17530 -0.6 -1.0 hypothetical protein compare
BWI76_RS03605 -0.6 -1.3 BMC domain-containing protein compare
BWI76_RS01095 -0.6 -0.8 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS22590 -0.6 -3.5 fimbrial protein compare
BWI76_RS27820 -0.6 -1.1 ilvB operon leader peptide IvbL compare
BWI76_RS01090 -0.6 -1.7 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
BWI76_RS08520 -0.6 -1.1 colicin transporter TolQ compare
BWI76_RS13745 -0.6 -2.2 formate dehydrogenase subunit beta compare
BWI76_RS01120 -0.6 -2.7 O-antigen translocase compare
BWI76_RS06475 -0.6 -1.0 protoheme IX farnesyltransferase compare
BWI76_RS10700 -0.6 -1.3 XRE family transcriptional regulator compare
BWI76_RS08375 -0.6 -1.5 pyroglutamyl-peptidase I compare
BWI76_RS11190 -0.6 -1.3 putative TetR/AcrR family transcriptional regulatory protein compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in stress experiments

For stress Sodium nitrite across organisms