Experiment set7IT009 for Klebsiella michiganensis M5al

Compare to:

LB with Sodium nitrite 40 mM

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS22815 +2.0 15.8 hybrid sensor histidine kinase/response regulator compare
BWI76_RS18335 +1.7 10.0 DNA-binding response regulator compare
BWI76_RS12170 +1.5 2.0 hypothetical protein compare
BWI76_RS09080 +1.4 3.8 molybdopterin-synthase adenylyltransferase MoeB compare
BWI76_RS12275 +1.4 4.5 hypothetical protein compare
BWI76_RS12160 +1.3 3.9 hypothetical protein compare
BWI76_RS08645 +1.3 3.3 molybdate ABC transporter substrate-binding protein compare
BWI76_RS12330 +1.3 4.7 hypothetical protein compare
BWI76_RS12350 +1.3 6.3 kinase compare
BWI76_RS12390 +1.2 4.1 antibiotic biosynthesis monooxygenase compare
BWI76_RS24385 +1.2 7.7 phosphodiesterase compare
BWI76_RS12215 +1.2 5.6 HNH endonuclease compare
BWI76_RS12300 +1.2 5.6 hypothetical protein compare
BWI76_RS08825 +1.2 5.2 cyclic pyranopterin monophosphate synthase MoaC compare
BWI76_RS25060 +1.2 3.7 lipoprotein NlpI compare
BWI76_RS12255 +1.2 7.5 hypothetical protein compare
BWI76_RS08815 +1.2 8.1 cyclic pyranopterin phosphate synthase compare
BWI76_RS13755 +1.2 2.1 hypothetical protein compare
BWI76_RS16645 +1.2 4.1 DeoR family transcriptional regulator compare
BWI76_RS12180 +1.1 4.6 membrane protein compare
BWI76_RS01585 +1.1 5.9 transcriptional regulator compare
BWI76_RS12265 +1.1 3.4 hypothetical protein compare
BWI76_RS00330 +1.1 5.7 molybdenum cofactor guanylyltransferase compare
BWI76_RS08820 +1.1 3.7 molybdenum cofactor biosynthesis protein compare
BWI76_RS14435 +1.1 1.3 glutamine ABC transporter ATP-binding protein compare
BWI76_RS18605 +1.0 1.2 oxidoreductase molybdopterin-binding protein compare
BWI76_RS26875 +1.0 4.0 dipeptide ABC transporter permease DppC compare
BWI76_RS11335 +1.0 2.0 tautomerase compare
BWI76_RS09730 +1.0 1.1 pyruvate formate lyase 1-activating protein compare
BWI76_RS12200 +1.0 5.0 hypothetical protein compare
BWI76_RS12105 +1.0 5.6 hypothetical protein compare
BWI76_RS12340 +1.0 2.4 molecular chaperone Tir compare
BWI76_RS17320 +1.0 5.7 respiratory nitrate reductase subunit gamma compare
BWI76_RS12125 +1.0 1.6 hypothetical protein compare
BWI76_RS19840 +1.0 1.9 hypothetical protein compare
BWI76_RS22240 +1.0 7.8 transcriptional regulator compare
BWI76_RS12410 +1.0 5.4 hypothetical protein compare
BWI76_RS24810 +1.0 1.7 hypothetical protein compare
BWI76_RS12110 +1.0 2.7 hypothetical protein compare
BWI76_RS12205 +1.0 4.2 hypothetical protein compare
BWI76_RS25065 +1.0 2.0 polyribonucleotide nucleotidyltransferase compare
BWI76_RS12115 +1.0 5.8 hypothetical protein compare
BWI76_RS06465 +1.0 2.7 IclR family transcriptional regulator compare
BWI76_RS12370 +1.0 5.4 hypothetical protein compare
BWI76_RS17335 +1.0 5.8 nitrate reductase subunit alpha compare
BWI76_RS12360 +0.9 4.7 hypothetical protein compare
BWI76_RS17325 +0.9 3.7 nitrate reductase molybdenum cofactor assembly chaperone compare
BWI76_RS12235 +0.9 2.6 hypothetical protein compare
BWI76_RS12225 +0.9 2.2 hypothetical protein compare
BWI76_RS12045 +0.9 2.4 hypothetical protein compare
BWI76_RS08835 +0.9 6.2 molybdopterin guanine dinucleotide biosynthesis protein MoaE compare
BWI76_RS17795 +0.9 2.2 ribonuclease D compare
BWI76_RS17955 +0.9 1.9 hypothetical protein compare
BWI76_RS23285 +0.9 3.6 hypothetical protein compare
BWI76_RS13250 +0.9 1.6 cytochrome b561 compare
BWI76_RS12280 +0.9 2.8 hypothetical protein compare
BWI76_RS09110 +0.9 1.9 glutathione ABC transporter permease GsiD compare
BWI76_RS12345 +0.9 2.5 nitrite transporter compare
BWI76_RS09085 +0.9 5.0 molybdopterin molybdenumtransferase MoeA compare
BWI76_RS12335 +0.9 2.4 hypothetical protein compare
BWI76_RS13320 +0.9 2.1 putative LpxA-like enzyme compare
BWI76_RS22645 +0.9 3.0 RNA polymerase sigma factor RpoS compare
BWI76_RS12385 +0.9 3.5 DNA polymerase V subunit UmuC compare
BWI76_RS12260 +0.9 3.9 hypothetical protein compare
BWI76_RS20795 +0.9 1.5 ethanolamine catabolic microcompartment shell protein EutN compare
BWI76_RS17330 +0.8 2.2 nitrate reductase subunit beta compare
BWI76_RS16920 +0.8 2.0 3-(2,3-dihydroxyphenyl)propionate dioxygenase compare
BWI76_RS12325 +0.8 5.7 hypothetical protein compare
BWI76_RS10910 +0.8 3.1 hypothetical protein compare
BWI76_RS14935 +0.8 1.2 NIPSNAP family containing protein compare
BWI76_RS05015 +0.8 2.7 transcriptional regulator compare
BWI76_RS15215 +0.8 1.2 N-acetyltransferase compare
BWI76_RS21130 +0.8 2.0 Fe-S assembly protein IscX compare
BWI76_RS07820 +0.8 1.3 S-methyl-5-thioribose kinase compare
BWI76_RS18580 +0.8 1.8 hypothetical protein compare
BWI76_RS16195 +0.8 1.7 hypothetical protein compare
BWI76_RS12285 +0.8 2.1 hypothetical protein compare
BWI76_RS27635 +0.8 2.6 AraC family transcriptional regulator compare
BWI76_RS20560 +0.8 3.1 hypothetical protein compare
BWI76_RS06535 +0.8 2.6 endopeptidase La compare
BWI76_RS08635 +0.8 2.5 molybdenum-dependent transcriptional regulator compare
BWI76_RS13560 +0.8 1.1 amino acid ABC transporter substrate-binding subunit compare
BWI76_RS12395 +0.8 4.1 zinc-binding alcohol dehydrogenase compare
BWI76_RS18755 +0.8 1.0 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
BWI76_RS11440 +0.7 1.0 hypothetical protein compare
BWI76_RS16470 +0.7 1.4 transcriptional repressor NemR compare
BWI76_RS13480 +0.7 1.5 XRE family transcriptional regulator compare
BWI76_RS01070 +0.7 3.8 thiol reductase thioredoxin compare
BWI76_RS12320 +0.7 3.1 hypothetical protein compare
BWI76_RS05790 +0.7 1.6 phage DNA-binding protein compare
BWI76_RS06540 +0.7 1.9 DNA-binding protein HU-beta compare
BWI76_RS10990 +0.7 1.1 dihydroorotase compare
BWI76_RS12190 +0.7 3.8 glycoside hydrolase family protein compare
BWI76_RS12210 +0.7 3.1 hypothetical protein compare
BWI76_RS12375 +0.7 2.4 DNA-invertase hin compare
BWI76_RS08745 +0.7 2.4 proline-specific permease compare
BWI76_RS18270 +0.7 1.9 hypothetical protein compare
BWI76_RS04360 +0.7 1.8 ribonucleoside hydrolase RihC compare
BWI76_RS20435 +0.7 1.2 chorismate synthase compare
BWI76_RS19775 +0.7 2.0 phage resistance protein compare
BWI76_RS09325 +0.7 1.6 putative bacteriophage tail completion protein compare
BWI76_RS12240 +0.7 2.3 terminase small subunit compare
BWI76_RS16420 +0.7 3.4 anhydro-N-acetylmuramic acid kinase compare
BWI76_RS10500 +0.7 1.6 flavoprotein monooxygenase compare
BWI76_RS16355 +0.7 1.4 electron transport complex subunit A compare
BWI76_RS10820 +0.7 1.4 iron uptake system protein EfeO compare
BWI76_RS23250 +0.7 1.6 hypothetical protein compare
BWI76_RS12305 +0.7 2.0 hypothetical protein compare
BWI76_RS12380 +0.7 1.8 DNA polymerase V subunit UmuD compare
BWI76_RS06630 +0.7 2.1 hypothetical protein compare
BWI76_RS12355 +0.7 2.9 flagellar biosynthesis protein compare
BWI76_RS12090 +0.7 1.8 HNH endonuclease compare
BWI76_RS14845 +0.7 3.5 hypothetical protein compare
BWI76_RS05555 +0.7 2.1 Crl family RNA polymerase assembly factor compare
BWI76_RS17420 +0.7 3.1 hypothetical protein compare
BWI76_RS06015 +0.7 1.1 hypothetical protein compare
BWI76_RS12400 +0.7 2.0 TetR family transcriptional regulator compare
BWI76_RS07765 +0.7 1.9 thioesterase compare
BWI76_RS14460 +0.7 2.9 MurR/RpiR family transcriptional regulator compare
BWI76_RS12365 +0.6 3.7 hypothetical protein compare
BWI76_RS05880 +0.6 1.0 AraC-type DNA-binding domain-containing protein compare
BWI76_RS19480 +0.6 1.4 transcriptional regulator compare
BWI76_RS12135 +0.6 3.1 C-5 cytosine-specific DNA methylase compare
BWI76_RS22130 +0.6 1.2 fructose-1-phosphate/6-phosphogluconate phosphatase compare
BWI76_RS02800 +0.6 1.7 ABC transporter compare
BWI76_RS04275 +0.6 2.9 molybdopterin adenylyltransferase compare
BWI76_RS05235 +0.6 1.0 hypothetical protein compare
BWI76_RS03040 +0.6 2.8 leucyl aminopeptidase compare
BWI76_RS12245 +0.6 3.2 hypothetical protein compare
BWI76_RS17920 +0.6 2.3 23S rRNA (guanine(745)-N(1))-methyltransferase compare
BWI76_RS06110 +0.6 2.6 hypothetical protein compare
BWI76_RS15800 +0.6 2.1 transcriptional regulator compare
BWI76_RS13495 +0.6 1.5 hypothetical protein compare
BWI76_RS14415 +0.6 1.4 transcriptional regulator, TetR family protein compare
BWI76_RS12220 +0.6 2.9 hypothetical protein compare
BWI76_RS06510 +0.6 1.5 BolA family transcriptional regulator compare
BWI76_RS13265 +0.6 2.3 hypothetical protein compare
BWI76_RS15095 +0.6 1.6 isochorismatase compare
BWI76_RS24010 +0.6 2.2 hypothetical protein compare
BWI76_RS01190 +0.6 1.6 iron donor protein CyaY compare
BWI76_RS01775 +0.6 1.1 hypothetical protein compare
BWI76_RS24240 +0.6 1.5 hypothetical protein compare
BWI76_RS11260 +0.6 1.3 hypothetical protein compare
BWI76_RS12290 +0.6 2.9 hypothetical protein compare
BWI76_RS07865 +0.6 1.6 methylthioribulose 1-phosphate dehydratase compare
BWI76_RS25000 +0.6 0.9 malonate decarboxylase acyl carrier protein compare
BWI76_RS24055 +0.6 2.4 MFS transporter compare
BWI76_RS13445 +0.6 1.3 alpha/beta hydrolase compare
BWI76_RS16475 +0.6 2.5 alkene reductase compare
BWI76_RS25485 +0.6 1.1 septum formation protein Maf compare
BWI76_RS17890 +0.6 2.8 PTS mannose transporter subunit EIIAB compare
BWI76_RS06460 +0.6 2.7 shikimate dehydrogenase compare
BWI76_RS08655 +0.6 1.5 molybdenum ABC transporter ATP-binding protein compare
BWI76_RS18065 +0.6 1.3 DNA polymerase III subunit theta compare
BWI76_RS07780 +0.6 1.0 hypothetical protein compare
BWI76_RS16095 +0.6 1.7 thiamine biosynthesis protein ApbE compare
BWI76_RS00745 +0.6 2.7 1,4-dihydroxy-2-naphthoate polyprenyltransferase compare
BWI76_RS16880 +0.6 2.6 GlpE family protein compare
BWI76_RS08855 +0.6 1.3 endonuclease/exonuclease/phosphatase compare
BWI76_RS10950 +0.6 1.8 MFS transporter compare
BWI76_RS14965 +0.6 2.2 AraC family transcriptional regulator compare
BWI76_RS19845 +0.6 3.7 phosphatase compare
BWI76_RS12250 +0.6 3.2 terminase compare
BWI76_RS10670 +0.6 1.5 PTS fructose transporter subunit IIC compare
BWI76_RS11535 +0.6 1.9 putative oxidoreductase, Zn-dependent and NAD(P)-binding protein compare
BWI76_RS20230 +0.6 1.2 hypothetical protein compare
BWI76_RS24180 +0.6 1.0 hypothetical protein compare
BWI76_RS06635 +0.6 1.6 methylated-DNA--protein-cysteine methyltransferase compare
BWI76_RS07950 +0.6 2.6 universal stress protein G compare
BWI76_RS03295 +0.6 1.1 transposase compare
BWI76_RS11980 +0.5 0.4 DeoR family transcriptional regulator compare
BWI76_RS09100 +0.5 3.7 glutathione ABC transporter substrate-binding protein GsiB compare
BWI76_RS13135 +0.5 2.2 3-oxoadipyl-CoA thiolase compare
BWI76_RS15285 +0.5 1.6 stress protection protein MarC compare
BWI76_RS02570 +0.5 2.9 transcriptional regulator compare
BWI76_RS23900 +0.5 2.7 hypothetical protein compare
BWI76_RS16500 +0.5 1.5 superoxide dismutase [Fe] compare
BWI76_RS13820 +0.5 0.8 hypothetical protein compare
BWI76_RS06175 +0.5 1.6 DUF188 domain-containing protein compare
BWI76_RS11060 +0.5 1.0 septum formation inhibitor Maf compare
BWI76_RS11820 +0.5 0.8 short-chain dehydrogenase/reductase SDR compare
BWI76_RS04050 +0.5 1.5 hydroxamate siderophore iron reductase FhuF compare
BWI76_RS19360 +0.5 2.5 glucose dehydrogenase compare
BWI76_RS00450 +0.5 1.5 formate dehydrogenase accessory protein FdhE compare
BWI76_RS19195 +0.5 1.8 nickel ABC transporter permease compare
BWI76_RS19750 +0.5 1.9 elongation factor P-like protein YeiP compare
BWI76_RS08330 +0.5 1.0 hypothetical protein compare
BWI76_RS08275 +0.5 0.5 LexA regulated protein compare
BWI76_RS18610 +0.5 2.1 transcriptional regulator LysR compare
BWI76_RS17880 +0.5 2.4 c-di-GMP phosphodiesterase compare
BWI76_RS26505 +0.5 1.9 nickel ABC transporter permease subunit NikB compare
BWI76_RS24245 +0.5 2.5 bifunctional glutathionylspermidine amidase/glutathionylspermidine synthase compare
BWI76_RS16525 +0.5 1.3 cyclopropane-fatty-acyl-phospholipid synthase compare
BWI76_RS05655 +0.5 1.0 hypothetical protein compare
BWI76_RS26150 +0.5 1.5 molecular chaperone Hsp33 compare
BWI76_RS15050 +0.5 1.4 sugar transporter compare
BWI76_RS15120 +0.5 1.1 hypothetical protein compare
BWI76_RS13045 +0.5 1.3 hypothetical protein compare
BWI76_RS10870 +0.5 1.3 nicotinamidase compare
BWI76_RS14040 +0.5 1.2 thiaminase compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in stress experiments

For stress Sodium nitrite across organisms