Experiment set7IT008 for Methanococcus maripaludis S2

Compare to:

Formate N-free with 2mM Adenosine

200 most important genes:

  gene name fitness t score description  
MMP_RS01570 -3.6 -1.5 hypothetical protein compare
MMP_RS02235 -3.2 -9.7 CBS domain-containing protein compare
MMP_RS02280 -2.8 -0.8 DUF211 domain-containing protein compare
MMP_RS02605 -2.4 -1.0 MotA/TolQ/ExbB proton channel family protein compare
MMP_RS00130 -2.4 -1.3 nickel-responsive transcriptional regulator NikR compare
MMP_RS05550 -2.2 -0.7 cation:proton antiporter compare
MMP_RS08350 -2.0 -0.8 hypothetical protein compare
MMP_RS06355 -1.9 -3.0 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS01385 -1.8 -0.6 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS06175 -1.8 -4.5 winged helix-turn-helix transcriptional regulator compare
MMP_RS03300 -1.6 -0.7 TOBE domain-containing protein compare
MMP_RS06840 -1.6 -0.8 DNA-directed RNA polymerase subunit N compare
MMP_RS00675 -1.6 -0.9 nitroreductase family protein compare
MMP_RS01020 -1.5 -0.9 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS03340 -1.5 -0.6 ABC transporter ATP-binding protein compare
MMP_RS00705 -1.5 -2.2 hypothetical protein compare
MMP_RS05865 -1.5 -2.8 hypothetical protein compare
MMP_RS07345 -1.3 -3.8 glycine synthesis protein GlyXL (from data) compare
MMP_RS02355 -1.3 -2.6 30S ribosomal protein S27ae compare
MMP_RS08940 -1.3 -1.0 MetS family NSS transporter small subunit compare
MMP_RS02010 -1.2 -5.9 PHP domain-containing protein compare
MMP_RS05875 -1.2 -3.7 hydroxyethylthiazole kinase compare
MMP_RS07630 -1.2 -1.0 ATP-binding cassette domain-containing protein compare
MMP_RS01195 -1.2 -0.9 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS04900 -1.1 -9.2 hypothetical protein compare
MMP_RS07545 -1.1 -0.7 HTH domain-containing protein compare
MMP_RS06680 -1.1 -6.6 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain compare
MMP_RS00670 -1.1 -3.3 TIM barrel protein compare
MMP_RS05835 -1.1 -0.6 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMP_RS05975 -1.1 -1.1 hypothetical protein compare
MMP_RS03220 -1.1 -1.6 RNA 2' 3'-cyclic phosphodiesterase compare
MMP_RS07635 -1.1 -4.1 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS05540 -1.1 -2.8 hypothetical protein compare
MMP_RS01175 -1.1 -2.9 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS04145 -1.0 -1.1 hypothetical protein compare
MMP_RS08720 -1.0 -0.8 4Fe-4S binding protein compare
MMP_RS03640 -1.0 -2.0 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS05985 -1.0 -2.4 hypothetical protein compare
MMP_RS05500 -1.0 -4.9 2-isopropylmalate synthase compare
MMP_RS07725 -1.0 -2.1 4Fe-4S dicluster domain-containing protein compare
MMP_RS02800 -1.0 -4.1 nucleotidyltransferase domain-containing protein compare
MMP_RS03960 -1.0 -0.6 hypothetical protein compare
MMP_RS02045 -1.0 -1.1 tRNA-Met compare
MMP_RS01380 -1.0 -1.9 PHP domain-containing protein compare
MMP_RS03065 -1.0 -1.8 AzlC family ABC transporter permease compare
MMP_RS00300 -0.9 -0.4 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS04870 -0.9 -2.6 TIGR02253 family HAD-type hydrolase compare
MMP_RS04615 -0.9 -2.5 PDGLE domain-containing protein compare
MMP_RS07815 -0.9 -0.8 DUF2120 domain-containing protein compare
MMP_RS05800 -0.9 -4.1 B12-binding domain-containing radical SAM protein compare
MMP_RS04055 -0.9 -1.0 hypothetical protein compare
MMP_RS06715 -0.9 -6.1 cache domain-containing protein compare
MMP_RS01005 -0.9 -0.8 riboflavin synthase compare
MMP_RS01545 -0.9 -0.6 CBS domain-containing protein compare
MMP_RS02340 -0.9 -1.0 DNA-directed RNA polymerase subunit E'' compare
MMP_RS05090 -0.9 -4.6 CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta compare
MMP_RS00345 -0.9 -3.1 DUF2666 domain-containing protein compare
MMP_RS02805 -0.9 -0.9 HEPN domain-containing protein compare
MMP_RS04015 -0.9 -1.5 hypothetical protein compare
MMP_RS01055 -0.9 -1.1 hypothetical protein compare
MMP_RS06720 -0.9 -3.3 response regulator transcription factor compare
MMP_RS00290 -0.8 -3.2 hypothetical protein compare
MMP_RS05095 -0.8 -4.0 CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon compare
MMP_RS05965 -0.8 -2.1 carboxymuconolactone decarboxylase family protein compare
MMP_RS07355 -0.8 -0.5 transcription factor S compare
MMP_RS02410 -0.8 -1.7 ABC transporter substrate-binding protein compare
MMP_RS05515 -0.8 -2.5 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS05100 -0.8 -5.8 CO dehydrogenase/acetyl-CoA synthase complex subunit alpha compare
MMP_RS07720 -0.8 -5.5 4Fe-4S binding protein compare
MMP_RS02885 -0.8 -4.8 molybdopterin biosynthesis protein compare
MMP_RS08370 -0.8 -0.3 cation:proton antiporter subunit C compare
MMP_RS07860 -0.8 -0.5 hypothetical protein compare
MMP_RS05765 -0.8 -2.4 M42 family metallopeptidase compare
MMP_RS06540 -0.8 -1.4 3-methyl-2-oxobutanoate dehydrogenase subunit VorB compare
MMP_RS01745 -0.8 -3.3 AMP phosphorylase compare
MMP_RS01320 -0.8 -2.1 hypothetical protein compare
MMP_RS00685 -0.8 -1.9 2-phospho-L-lactate guanylyltransferase compare
MMP_RS04125 -0.8 -1.8 TetR/AcrR family transcriptional regulator compare
MMP_RS06870 -0.8 -3.4 DedA family protein compare
MMP_RS04710 -0.8 -0.8 hypothetical protein compare
MMP_RS00395 -0.7 -0.8 MGMT family protein compare
MMP_RS07845 -0.7 -1.1 LL-diaminopimelate aminotransferase compare
MMP_RS06325 -0.7 -0.8 hypothetical protein compare
MMP_RS03485 -0.7 -2.3 TIGR00267 family protein compare
MMP_RS05080 -0.7 -4.5 acetyl-CoA decarbonylase/synthase complex subunit delta compare
MMP_RS07960 -0.7 -2.9 sugar phosphate isomerase/epimerase compare
MMP_RS01220 -0.7 -3.0 hypothetical protein compare
MMP_RS08105 -0.7 -2.1 6-carboxyhexanoate--CoA ligase compare
MMP_RS08320 -0.7 -2.8 molybdopterin molybdotransferase MoeA compare
MMP_RS06475 -0.7 -2.0 FAD-dependent oxidoreductase compare
MMP_RS05055 -0.7 -5.0 DUF166 domain-containing protein compare
MMP_RS08100 -0.7 -2.4 8-amino-7-oxononanoate synthase compare
MMP_RS02170 -0.7 -1.8 CBS domain-containing protein compare
MMP_RS04305 -0.7 -0.9 hypothetical protein compare
MMP_RS05085 -0.7 -1.8 AAA family ATPase compare
MMP_RS00545 -0.7 -1.3 XRE family transcriptional regulator compare
MMP_RS06375 -0.7 -2.9 ATP-dependent sacrificial sulfur transferase LarE compare
MMP_RS02675 -0.7 -1.8 hypothetical protein compare
MMP_RS01660 -0.7 -1.5 hypothetical protein compare
MMP_RS01650 -0.7 -0.4 sulfurtransferase TusA family protein compare
MMP_RS01415 -0.7 -1.9 DUF2067 domain-containing protein compare
MMP_RS04610 -0.7 -2.3 Dabb family protein compare
MMP_RS04410 -0.7 -2.6 hypothetical protein compare
MMP_RS05065 -0.7 -1.7 CooT family nickel-binding protein compare
MMP_RS00990 -0.7 -1.4 hypothetical protein compare
MMP_RS02550 -0.7 -1.7 helix-turn-helix transcriptional regulator compare
MMP_RS00060 -0.7 -1.0 3-dehydroquinate synthase II compare
MMP_RS02370 -0.7 -1.7 NifB/NifX family molybdenum-iron cluster-binding protein compare
MMP_RS04060 -0.7 -2.1 hypothetical protein compare
MMP_RS02965 -0.7 -1.9 carboxymuconolactone decarboxylase family protein compare
MMP_RS01865 -0.7 -0.8 GPR1/FUN34/YaaH family transporter compare
MMP_RS00080 -0.7 -1.4 RecB-family nuclease compare
MMP_RS06140 -0.6 -2.1 radical SAM protein compare
MMP_RS04620 -0.6 -3.7 cobalt transporter CbiM compare
MMP_RS07905 -0.6 -2.3 DUF3343 domain-containing protein compare
MMP_RS06430 -0.6 -2.5 6-carboxytetrahydropterin synthase QueD compare
MMP_RS03555 -0.6 -2.6 transcriptional regulator compare
MMP_RS03590 -0.6 -1.8 METTL5 family protein compare
MMP_RS03550 -0.6 -1.1 DUF2124 domain-containing protein compare
MMP_RS05110 -0.6 -2.3 16S ribosomal RNA methyltransferase A compare
MMP_RS08615 -0.6 -0.7 flagellar protein G compare
MMP_RS07645 -0.6 -2.5 aldehyde dehydrogenase family protein compare
MMP_RS01675 -0.6 -0.8 hypothetical protein compare
MMP_RS08310 -0.6 -0.9 TMEM165/GDT1 family protein compare
MMP_RS08745 -0.6 -2.2 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS07605 -0.6 -1.3 diadenylate cyclase compare
MMP_RS02815 -0.6 -0.9 hypothetical protein compare
MMP_RS06110 -0.6 -1.0 ATP-dependent protease LonB compare
MMP_RS07765 -0.6 -3.0 sodium:alanine symporter family protein compare
MMP_RS02530 -0.6 -2.4 type II toxin-antitoxin system mRNA interferase toxin RelE/StbE family compare
MMP_RS06700 -0.6 -2.8 hypothetical protein compare
MMP_RS03585 -0.6 -1.3 Hsp20/alpha crystallin family protein compare
MMP_RS03965 -0.6 -0.9 hypothetical protein compare
MMP_RS04690 -0.6 -1.4 class III signal peptide-containing protein compare
MMP_RS06860 -0.6 -0.6 4Fe-4S binding protein compare
MMP_RS06910 -0.6 -2.2 RlmF-related methyltransferase compare
MMP_RS05695 -0.6 -2.1 phospholipase D-like domain-containing protein compare
MMP_RS08095 -0.6 -2.4 dethiobiotin synthase compare
MMP_RS01855 -0.6 -2.3 2-hydroxyacyl-CoA dehydratase family protein compare
MMP_RS01255 -0.6 -2.0 amino acid ABC transporter ATP-binding protein compare
MMP_RS05490 -0.6 -2.3 IMPACT family protein compare
MMP_RS08395 -0.6 -2.1 DsrE family protein compare
MMP_RS06285 -0.6 -1.0 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS06915 -0.5 -2.6 metallophosphoesterase compare
MMP_RS06865 -0.5 -1.1 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMP_RS02740 -0.5 -1.5 hypothetical protein compare
MMP_RS03575 -0.5 -3.0 ECF transporter S component compare
MMP_RS00040 -0.5 -1.5 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS06270 -0.5 -1.8 TIGR00300 family protein compare
MMP_RS00905 -0.5 -1.2 phenylacetate--CoA ligase compare
MMP_RS03015 -0.5 -1.9 GTP 3' 8-cyclase MoaA compare
MMP_RS04995 -0.5 -2.5 hypothetical protein compare
MMP_RS01075 -0.5 -0.7 hypothetical protein compare
MMP_RS03110 -0.5 -1.9 glycosyltransferase family 2 protein compare
MMP_RS02920 -0.5 -3.2 DMT family transporter compare
MMP_RS06345 -0.5 -3.2 formate dehydrogenase accessory sulfurtransferase FdhD compare
MMP_RS04215 -0.5 -2.9 nickel pincer cofactor biosynthesis protein LarB compare
MMP_RS06250 -0.5 -2.6 hypothetical protein compare
MMP_RS04190 -0.5 -1.7 hypothetical protein compare
MMP_RS06685 -0.5 -3.1 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS03495 -0.5 -2.1 Na/Pi cotransporter family protein compare
MMP_RS01790 -0.5 -1.8 restriction endonuclease compare
MMP_RS07925 -0.5 -1.2 haloacid dehalogenase compare
MMP_RS03625 -0.5 -1.4 cell wall-binding protein compare
MMP_RS05070 -0.5 -1.9 4Fe-4S dicluster domain-containing protein compare
MMP_RS06035 -0.5 -2.6 glycosyltransferase family 2 protein compare
MMP_RS08980 -0.5 -1.2 hypothetical protein compare
MMP_RS05075 -0.5 -2.9 acetyl-CoA decarbonylase/synthase complex subunit gamma compare
MMP_RS04605 -0.5 -1.3 cobalt ECF transporter T component CbiQ compare
MMP_RS02375 -0.5 -1.8 hypothetical protein compare
MMP_RS01870 -0.5 -2.4 acyl-CoA dehydratase activase compare
MMP_RS05780 -0.4 -1.9 multidrug resistance efflux transporter family protein compare
MMP_RS00430 -0.4 -1.4 hypothetical protein compare
MMP_RS04185 -0.4 -2.3 aldo/keto reductase compare
MMP_RS00760 -0.4 -1.8 branched-chain-amino-acid transaminase compare
MMP_RS02825 -0.4 -2.0 mechanosensitive ion channel family protein compare
MMP_RS03060 -0.4 -1.9 MBL fold metallo-hydrolase compare
MMP_RS02165 -0.4 -1.8 tRNA-dihydrouridine synthase compare
MMP_RS01780 -0.4 -1.4 TrmJ/YjtD family RNA methyltransferase compare
MMP_RS03120 -0.4 -1.1 hypothetical protein compare
MMP_RS07840 -0.4 -0.8 ribonuclease III compare
MMP_RS01365 -0.4 -0.9 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS06920 -0.4 -1.7 AAA family ATPase compare
MMP_RS07365 -0.4 -2.7 2-phosphoglycerate kinase compare
MMP_RS02290 -0.4 -1.8 MBL fold metallo-hydrolase compare
MMP_RS01135 -0.4 -2.3 molybdate ABC transporter substrate-binding protein compare
MMP_RS06760 -0.4 -1.1 hypothetical protein compare
MMP_RS04320 -0.4 -2.5 uroporphyrinogen decarboxylase family protein compare
MMP_RS00535 -0.4 -1.0 TIGR00375 family protein compare
MMP_RS06370 -0.4 -1.5 biotin synthase BioB compare
MMP_RS00050 -0.4 -1.4 AarF/UbiB family protein compare
MMP_RS04815 -0.4 -2.1 chemotaxis protein CheD compare
MMP_RS08790 -0.4 -0.4 translation initiation factor IF-2 subunit alpha compare
MMP_RS06190 -0.4 -1.2 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO compare
MMP_RS00400 -0.4 -1.7 tributyrin esterase compare
MMP_RS03655 -0.4 -1.1 DUF1894 domain-containing protein compare
MMP_RS06075 -0.4 -1.2 class I SAM-dependent methyltransferase compare
MMP_RS04020 -0.4 -1.2 hypothetical protein compare
MMP_RS06115 -0.4 -2.4 class II aldolase/adducin family protein compare
MMP_RS08570 -0.4 -1.9 coenzyme F420-0:L-glutamate ligase compare


Specific Phenotypes

For 2 genes in this experiment

For nitrogen source Adenosine in Methanococcus maripaludis S2

For nitrogen source Adenosine across organisms