Experiment set7IT008 for Klebsiella michiganensis M5al

Compare to:

LB with Sodium nitrite 20 mM

200 most important genes:

  gene name fitness t score description  
BWI76_RS04305 -4.7 -1.4 molecular chaperone DnaJ compare
BWI76_RS20750 -4.6 -1.4 carboxysome structural protein EutK compare
BWI76_RS13560 -4.6 -1.4 amino acid ABC transporter substrate-binding subunit compare
BWI76_RS02530 -4.5 -3.0 tRNA dimethylallyltransferase compare
BWI76_RS15660 -4.4 -1.3 hypothetical protein compare
BWI76_RS01200 -4.4 -2.9 diaminopimelate epimerase compare
BWI76_RS23885 -4.1 -1.7 2-octaprenylphenol hydroxylase compare
BWI76_RS21370 -4.0 -1.6 ATP-dependent RNA helicase SrmB compare
BWI76_RS09625 -3.9 -1.6 hypothetical protein compare
BWI76_RS05835 -3.8 -2.9 gamma-glutamyl-phosphate reductase compare
BWI76_RS27430 -3.6 -1.5 (p)ppGpp synthetase compare
BWI76_RS23240 -3.3 -4.8 exonuclease V subunit gamma compare
BWI76_RS21505 -3.3 -1.4 hypothetical protein compare
BWI76_RS09645 -3.2 -1.3 thioredoxin-disulfide reductase compare
BWI76_RS05260 -3.1 -2.1 chaperone compare
BWI76_RS20135 -3.0 -5.4 NADH-quinone oxidoreductase subunit M compare
BWI76_RS02410 -3.0 -2.0 EF-P beta-lysylation protein EpmB compare
BWI76_RS20160 -2.9 -2.3 NADH-quinone oxidoreductase subunit H compare
BWI76_RS16275 -2.9 -2.4 fumarate hydratase FumA compare
BWI76_RS23230 -2.7 -4.1 exodeoxyribonuclease V subunit beta compare
BWI76_RS08605 -2.7 -1.6 phosphoglyceromutase compare
BWI76_RS19495 -2.7 -1.1 ABC transporter, quaternary amine uptake transporter (QAT) family, ATP-binding protein compare
BWI76_RS16635 -2.7 -3.2 carbonate dehydratase compare
BWI76_RS25300 -2.6 -2.3 hybrid sensor histidine kinase/response regulator compare
BWI76_RS12885 -2.6 -4.2 hypothetical protein compare
BWI76_RS26570 -2.6 -1.9 anion permease compare
BWI76_RS00965 -2.5 -1.3 acetolactate synthase 2 small subunit compare
BWI76_RS21140 -2.4 -2.2 molecular chaperone HscA compare
BWI76_RS20720 -2.4 -1.4 hypothetical protein compare
BWI76_RS08765 -2.4 -2.1 8-amino-7-oxononanoate synthase compare
BWI76_RS09660 -2.4 -1.8 DNA translocase FtsK compare
BWI76_RS21075 -2.3 -1.9 membrane protein compare
BWI76_RS20145 -2.3 -1.7 NADH-quinone oxidoreductase subunit K compare
BWI76_RS08405 -2.3 -2.9 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS25920 -2.3 -1.4 peptidylprolyl isomerase compare
BWI76_RS14770 -2.2 -1.3 PTS IIA 2 domain protein compare
BWI76_RS00355 -2.2 -2.5 DNA polymerase I compare
BWI76_RS08980 -2.2 -1.3 DNA starvation/stationary phase protection protein compare
BWI76_RS20900 -2.2 -1.0 outer membrane protein assembly factor BamC compare
BWI76_RS01630 -2.1 -1.3 16S ribosomal RNA compare
BWI76_RS20130 -2.1 -4.9 NADH-quinone oxidoreductase subunit N compare
BWI76_RS20150 -2.1 -1.8 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS01800 -2.1 -3.5 glucose-6-phosphate isomerase compare
BWI76_RS15195 -2.1 -1.4 DUF4186 domain-containing protein compare
BWI76_RS21375 -2.1 -1.6 autonomous glycyl radical cofactor GrcA compare
BWI76_RS26405 -2.1 -1.5 16S rRNA (guanine(966)-N(2))-methyltransferase compare
BWI76_RS07475 -2.0 -1.2 DNA-binding transcriptional regulator RamA compare
BWI76_RS22420 -2.0 -2.2 LacI family transcriptional regulator compare
BWI76_RS26620 -2.0 -1.2 Fe-S biogenesis protein NfuA compare
BWI76_RS15685 -2.0 -1.8 hypothetical protein compare
BWI76_RS05070 -2.0 -2.1 type II secretion system protein GspH compare
BWI76_RS21580 -1.9 -1.6 SsrA-binding protein compare
BWI76_RS05790 -1.9 -1.5 phage DNA-binding protein compare
BWI76_RS15235 -1.9 -1.8 hypothetical protein compare
BWI76_RS19900 -1.8 -4.5 FAD:protein FMN transferase compare
BWI76_RS02680 -1.8 -2.1 EamA family transporter compare
BWI76_RS02050 -1.8 -1.8 CidA/LrgA family protein compare
BWI76_RS08430 -1.8 -4.4 succinate--CoA ligase subunit alpha compare
BWI76_RS09635 -1.8 -2.1 amino acid ABC transporter ATP-binding protein compare
BWI76_RS00345 -1.8 -3.7 protein disulfide oxidoreductase DsbA compare
BWI76_RS14820 -1.8 -1.7 LysR family transcriptional regulator compare
BWI76_RS23140 -1.8 -1.8 carboxysome shell protein compare
BWI76_RS00795 -1.7 -2.4 carboxymuconolactone decarboxylase compare
BWI76_RS04515 -1.7 -1.2 Co2+/Mg2+ efflux protein ApaG compare
BWI76_RS17190 -1.7 -2.3 TonB system transport protein TonB compare
BWI76_RS00140 -1.7 -0.8 phosphate transport system regulator PhoU compare
BWI76_RS26065 -1.7 -2.7 phosphoglycolate phosphatase compare
BWI76_RS08495 -1.6 -4.1 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS15035 -1.6 -1.5 metal ABC transporter permease compare
BWI76_RS09560 -1.6 -0.9 DoxX family membrane protein compare
BWI76_RS05840 -1.6 -3.2 glutamate 5-kinase compare
BWI76_RS15955 -1.6 -2.0 transcriptional regulator compare
BWI76_RS18165 -1.6 -1.3 NUDIX pyrophosphatase compare
BWI76_RS15360 -1.6 -2.5 hypothetical protein compare
BWI76_RS15740 -1.6 -1.5 HNH endonuclease compare
BWI76_RS14005 -1.5 -1.4 TetR family transcriptional regulator compare
BWI76_RS12145 -1.5 -1.4 hypothetical protein compare
BWI76_RS20155 -1.5 -1.8 NADH-quinone oxidoreductase subunit I compare
BWI76_RS13590 -1.5 -1.7 hypothetical protein compare
BWI76_RS20190 -1.5 -2.6 NADH-quinone oxidoreductase subunit A compare
BWI76_RS11105 -1.5 -2.1 aminodeoxychorismate lyase compare
BWI76_RS13480 -1.5 -1.2 XRE family transcriptional regulator compare
BWI76_RS07185 -1.5 -1.3 hypothetical protein compare
BWI76_RS21310 -1.5 -0.9 DNA repair protein RecO compare
BWI76_RS00180 -1.4 -1.0 F0F1 ATP synthase subunit epsilon compare
BWI76_RS18580 -1.4 -0.8 hypothetical protein compare
BWI76_RS11700 -1.4 -1.0 hypothetical protein compare
BWI76_RS25000 -1.4 -1.2 malonate decarboxylase acyl carrier protein compare
BWI76_RS26505 -1.4 -2.2 nickel ABC transporter permease subunit NikB compare
BWI76_RS23360 -1.4 -1.7 diaminopimelate decarboxylase compare
BWI76_RS03105 -1.3 -0.9 myo-inosose-2 dehydratase compare
BWI76_RS07740 -1.3 -1.4 Fe2+-enterobactin ABC transporter substrate-binding protein compare
BWI76_RS20380 -1.3 -1.1 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS24040 -1.3 -2.4 hypothetical protein compare
BWI76_RS00880 -1.3 -2.2 membrane protein compare
BWI76_RS11810 -1.3 -1.0 outer membrane protein OmpW compare
BWI76_RS23860 -1.3 -1.6 protein disulfide oxidoreductase compare
BWI76_RS00720 -1.3 -1.6 DNA-binding response regulator compare
BWI76_RS08210 -1.3 -1.7 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS14870 -1.3 -1.7 hypothetical protein compare
BWI76_RS06485 -1.3 -2.3 cytochrome o ubiquinol oxidase subunit III compare
BWI76_RS23895 -1.3 -0.8 Xaa-Pro aminopeptidase compare
BWI76_RS13245 -1.3 -1.8 DNA-damage-inducible protein I compare
BWI76_RS08425 -1.3 -3.4 succinyl-CoA ligase subunit beta compare
BWI76_RS16200 -1.3 -0.8 NAD(P) transhydrogenase subunit beta compare
BWI76_RS21450 -1.3 -1.2 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS19035 -1.3 -3.7 dTDP-rhamnosyl transferase compare
BWI76_RS05915 -1.3 -2.2 helix-turn-helix transcriptional regulator compare
BWI76_RS09285 -1.2 -2.5 hypothetical protein compare
BWI76_RS12855 -1.2 -1.5 enamine deaminase RidA compare
BWI76_RS04530 -1.2 -1.5 peptidylprolyl isomerase SurA compare
BWI76_RS19380 -1.2 -3.3 hydroxyethylthiazole kinase compare
BWI76_RS20785 -1.2 -0.9 ethanolamine utilization protein EutJ compare
BWI76_RS05235 -1.2 -0.9 hypothetical protein compare
BWI76_RS27425 -1.2 -1.6 DNA-directed RNA polymerase subunit omega compare
BWI76_RS16315 -1.2 -1.4 SirA-like protein compare
BWI76_RS01385 -1.2 -1.4 potassium transporter compare
BWI76_RS06405 -1.2 -1.4 2-dehydropantoate 2-reductase compare
BWI76_RS00865 -1.2 -3.4 DNA-binding transcriptional regulator OxyR compare
BWI76_RS06475 -1.2 -1.1 protoheme IX farnesyltransferase compare
BWI76_RS03595 -1.2 -0.8 ethanolamine utilization protein EutM compare
BWI76_RS22350 -1.2 -1.9 hydrogenase nickel incorporation protein HypB compare
BWI76_RS10465 -1.2 -1.8 hypothetical protein compare
BWI76_RS16000 -1.2 -0.9 multidrug transporter subunit MdtI compare
BWI76_RS08375 -1.2 -1.4 pyroglutamyl-peptidase I compare
BWI76_RS20180 -1.2 -3.1 NADH-quinone oxidoreductase subunit C/D compare
BWI76_RS13630 -1.1 -3.1 ABC transporter compare
BWI76_RS08390 -1.1 -1.5 hypothetical protein compare
BWI76_RS04510 -1.1 -1.3 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS15690 -1.1 -2.1 hypothetical protein compare
BWI76_RS12720 -1.1 -2.2 KTSC domain-containing protein compare
BWI76_RS06795 -1.1 -1.7 hypothetical protein compare
BWI76_RS10055 -1.1 -1.9 AraC family transcriptional regulator compare
BWI76_RS06810 -1.1 -2.5 hypothetical protein compare
BWI76_RS23830 -1.1 -2.4 hypothetical protein compare
BWI76_RS09640 -1.1 -3.2 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS05160 -1.1 -2.5 hypothetical protein compare
BWI76_RS25065 -1.1 -2.7 polyribonucleotide nucleotidyltransferase compare
BWI76_RS23480 -1.1 -4.7 EAL domain-containing protein compare
BWI76_RS03660 -1.1 -1.6 hypothetical protein compare
BWI76_RS09610 -1.1 -2.1 ATP-dependent Clp protease adaptor ClpS compare
BWI76_RS17375 -1.1 -1.3 nitrate ABC transporter, permease protein compare
BWI76_RS10560 -1.1 -1.5 gamma-glutamyltransferase compare
BWI76_RS11245 -1.1 -2.9 spermidine/putrescine ABC transporter permease PotC compare
BWI76_RS08705 -1.1 -1.9 putative LuxR family regulatory protein compare
BWI76_RS27635 -1.1 -2.7 AraC family transcriptional regulator compare
BWI76_RS03180 -1.1 -1.3 phage transcriptional regulator, AlpA compare
BWI76_RS00750 -1.1 -1.5 ATP-dependent protease ATP-binding subunit HslU compare
BWI76_RS22430 -1.1 -2.1 manganese/iron transporter ATP-binding protein compare
BWI76_RS21980 -1.1 -1.9 hypothetical protein compare
BWI76_RS11235 -1.1 -0.7 hypothetical protein compare
BWI76_RS15950 -1.1 -1.2 dethiobiotin synthase compare
BWI76_RS08385 -1.1 -1.0 citrate (Si)-synthase compare
BWI76_RS10955 -1.1 -1.2 hypothetical protein compare
BWI76_RS26085 -1.1 -1.6 3-dehydroquinate synthase compare
BWI76_RS24770 -1.0 -1.2 hypothetical protein compare
BWI76_RS01995 -1.0 -0.9 AraC family transcriptional regulator compare
BWI76_RS19535 -1.0 -1.9 putative integral membrane protein compare
BWI76_RS18360 -1.0 -1.0 aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase family protein compare
BWI76_RS16555 -1.0 -1.9 hypothetical protein compare
BWI76_RS13445 -1.0 -1.3 alpha/beta hydrolase compare
BWI76_RS20170 -1.0 -2.0 NADH-quinone oxidoreductase subunit F compare
BWI76_RS14915 -1.0 -0.9 hypothetical protein compare
BWI76_RS06330 -1.0 -2.5 DNA-binding transcriptional regulator compare
BWI76_RS25280 -1.0 -1.2 RNase adaptor protein RapZ compare
BWI76_RS01905 -1.0 -1.3 envelope stress response protein PspG compare
BWI76_RS10510 -1.0 -1.6 OHCU decarboxylase compare
BWI76_RS12500 -1.0 -2.5 dipeptide epimerase compare
BWI76_RS04270 -1.0 -2.0 transaldolase compare
BWI76_RS20730 -1.0 -0.9 hypothetical protein compare
BWI76_RS12470 -1.0 -1.1 thiosulfate sulfurtransferase PspE compare
BWI76_RS12495 -1.0 -1.1 2-Cys peroxiredoxin compare
BWI76_RS21565 -1.0 -0.7 outer membrane protein assembly factor BamE compare
BWI76_RS14665 -1.0 -1.4 minor fimbrial subunit YfcQ compare
BWI76_RS20650 -1.0 -2.1 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS06470 -1.0 -1.8 hypothetical protein compare
BWI76_RS15630 -1.0 -1.5 hypothetical protein compare
BWI76_RS16800 -1.0 -1.5 amino acid ABC transporter permease compare
BWI76_RS03665 -1.0 -0.8 ABC transporter ATP-binding protein compare
BWI76_RS04705 -1.0 -2.9 DNA-binding transcriptional regulator FruR compare
BWI76_RS20940 -1.0 -1.5 uracil/xanthine transporter compare
BWI76_RS15350 -1.0 -0.8 hypothetical protein compare
BWI76_RS00725 -1.0 -2.1 periplasmic repressor CpxP compare
BWI76_RS11400 -1.0 -2.5 SAM-dependent methyltransferase compare
BWI76_RS05785 -1.0 -2.5 CI repressor compare
BWI76_RS16220 -0.9 -1.1 hypothetical protein compare
BWI76_RS22700 -0.9 -2.9 sulfate adenylyltransferase subunit 2 compare
BWI76_RS15565 -0.9 -1.7 hypothetical protein compare
BWI76_RS13785 -0.9 -1.0 ABC transporter permease compare
BWI76_RS14775 -0.9 -0.8 creatinine amidohydrolase compare
BWI76_RS02200 -0.9 -2.5 phosphonate C-P lyase system protein PhnL compare
BWI76_RS12535 -0.9 -2.0 hypothetical protein compare
BWI76_RS26150 -0.9 -1.4 molecular chaperone Hsp33 compare
BWI76_RS22625 -0.9 -1.3 transcriptional regulator compare
BWI76_RS10060 -0.9 -0.8 acylphosphatase compare
BWI76_RS20140 -0.9 -2.0 NADH-quinone oxidoreductase subunit L compare
BWI76_RS12450 -0.9 -1.5 phage shock protein PspA compare
BWI76_RS19460 -0.9 -1.0 lipoprotein compare
BWI76_RS02190 -0.9 -1.8 ribose 1,5-bisphosphokinase compare
BWI76_RS01210 -0.9 -0.9 tyrosine recombinase XerC compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in stress experiments

For stress Sodium nitrite across organisms