Experiment set7IT007 for Pseudomonas syringae pv. syringae B728a

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Citric Acid carbon source

Genes with specific phenotypes:

  gene name fitness t score description  
Psyr_0821 -3.7 -8.8 PTS system D-fructose-specific IIA component (F1P-forming), Frc family / Phosphocarrier protein HPr / phosphoenolpyruvate--protein phosphotransferase compare
Psyr_5061 -3.2 -13.5 acetyl-CoA carboxylase carboxyltransferase subunit alpha / biotin carboxylase compare
Psyr_5060 -2.9 -13.4 Oxaloacetate decarboxylase, alpha subunit compare
Psyr_2489 -2.9 -9.7 Alpha amylase, catalytic region compare
Psyr_0823 -2.6 -10.0 PTS system D-fructose-specific IIB component (F1P-forming), Frc family / PTS system D-fructose-specific IIC component (F1P-forming), Frc family compare
Psyr_5062 -2.6 -5.4 transcriptional regulator, LysR family compare
Psyr_2418 -2.4 -8.9 shikimate dehydrogenase compare
Psyr_3211 -2.4 -6.9 ATP-binding region, ATPase-like:Histidine kinase, HAMP region compare
Psyr_4575 -2.0 -9.9 adenosylmethionine decarboxylase proenzyme compare
Psyr_1962 -1.7 -8.8 TonB-dependent siderophore receptor compare
Psyr_0726 -1.5 -5.6 ribosomal large subunit pseudouridine synthase D compare
Psyr_0232 -1.3 -7.7 gamma-glutamylputrescine oxidase compare
Psyr_4507 -1.3 -6.5 Inositol monophosphatase compare
Psyr_1757 -1.2 -6.2 Binding-protein-dependent transport systems inner membrane component compare
Psyr_0359 -1.1 -5.8 D-cysteine desulfhydrase compare
Psyr_3939 +1.1 5.2 transcriptional regulator, GntR family compare
Psyr_3275 +1.1 6.9 Helix-turn-helix protein RpiR:Sugar isomerase (SIS) compare
Psyr_2072 +1.2 7.1 conserved hypothetical protein compare
Psyr_3658 +1.3 7.9 Rhodanese-like protein compare
Psyr_1639 +1.3 6.5 ribosomal large subunit pseudouridine synthase C conserved
Psyr_3993 +1.3 9.4 Glycoside hydrolase, family 3, N-terminal:Glycoside hydrolase, family 3, C-terminal compare
Psyr_2089 +2.6 11.1 Protein of unknown function DUF299 compare
Psyr_4789 +3.0 8.7 lipoprotein, putative compare
Psyr_1110 +3.4 22.3 glucokinase compare
Psyr_1115 +3.5 22.4 glucose ABC transporter membrane protein compare
Psyr_1116 +3.5 22.5 glucose ABC transporter ATP-binding protein compare
Psyr_1114 +3.7 22.2 glucose ABC transporter membrane protein compare
Psyr_1113 +3.9 25.5 glucose-binding protein compare
Psyr_1117 +4.0 25.1 porin, OprB family compare
Psyr_4029 +4.6 24.1 pyruvate kinase compare


Specific phenotypes for carbon source Citric Acid across organisms