Experiment set7IT006 for Pseudomonas syringae pv. syringae B728a

Compare to:

Glycerol carbon source

200 most important genes:

  gene name fitness t score description  
Psyr_1983 -5.5 -3.8 3-isopropylmalate dehydratase, large subunit compare
Psyr_1984 -5.0 -4.9 3-isopropylmalate dehydratase, small subunit compare
Psyr_4894 -5.0 -7.5 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
Psyr_1269 -4.9 -3.4 phosphoribosylformylglycinamidine synthase compare
Psyr_4897 -4.8 -3.3 imidazoleglycerol-phosphate dehydratase compare
Psyr_4580 -4.8 -3.3 anthranilate phosphoribosyltransferase compare
Psyr_0827 -4.3 -4.2 pantothenate synthetase compare
Psyr_4609 -4.3 -12.0 anthranilate synthase, component I compare
Psyr_4896 -4.2 -8.9 imidazole glycerol phosphate synthase subunit hisH compare
Psyr_0847 -4.2 -7.4 acetolactate synthase, small subunit compare
Psyr_1985 -4.2 -7.4 3-isopropylmalate dehydrogenase compare
Psyr_4581 -4.1 -3.7 anthranilate synthase, component II compare
Psyr_4133 -4.1 -11.5 histidinol dehydrogenase compare
Psyr_4740 -4.0 -6.1 thiazole-phosphate synthase compare
Psyr_1669 -4.0 -9.2 O-succinylhomoserine sulfhydrylase compare
Psyr_0412 -4.0 -9.6 glutamate synthase (NADPH) small subunit compare
Psyr_4134 -4.0 -10.8 ATP phosphoribosyltransferase (homohexameric) compare
Psyr_1108 -4.0 -12.3 glyceraldehyde-3-phosphate dehydrogenase compare
Psyr_0846 -4.0 -11.0 acetolactate synthase, large subunit compare
Psyr_4369 -4.0 -5.9 glutamate-5-semialdehyde dehydrogenase compare
Psyr_0469 -3.9 -9.6 dihydroxyacid dehydratase compare
Psyr_1663 -3.8 -4.5 phosphoribosylanthranilate isomerase compare
Psyr_4270 -3.8 -9.3 serine hydroxymethyltransferase compare
Psyr_0473 -3.8 -6.6 Methionine biosynthesis MetW compare
Psyr_0848 -3.8 -9.5 ketol-acid reductoisomerase compare
Psyr_4940 -3.7 -3.5 3'(2'),5'-bisphosphate nucleotidase compare
Psyr_0411 -3.6 -17.3 glutamate synthase (NADPH) large subunit compare
Psyr_0034 -3.6 -2.5 tryptophan synthase, beta chain compare
Psyr_4852 -3.6 -9.5 D-3-phosphoglycerate dehydrogenase compare
Psyr_0918 -3.5 -13.3 ABC transporter compare
Psyr_0576 -3.5 -4.6 ATP phosphoribosyltransferase regulatory subunit, putative compare
Psyr_2462 -3.5 -7.4 Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region compare
Psyr_4893 -3.5 -2.0 imidazole glycerol phosphate synthase subunit hisF compare
Psyr_3905 -3.5 -6.2 glycerol kinase compare
Psyr_0474 -3.5 -10.5 homoserine O-acetyltransferase compare
Psyr_3174 -3.4 -6.2 uroporphyrinogen-III C-methyltransferase / precorrin-2 dehydrogenase compare
Psyr_4340 -3.4 -8.6 phosphomethylpyrimidine kinase, putative compare
Psyr_0917 -3.4 -11.8 ABC-2 compare
Psyr_1257 -3.4 -12.9 2-isopropylmalate synthase compare
Psyr_1963 -3.4 -8.3 Cyclic peptide transporter compare
Psyr_4622 -3.4 -6.2 Nucleotidyl transferase compare
Psyr_0704 -3.3 -9.2 glutamate 5-kinase compare
Psyr_1668 -3.2 -7.1 amidophosphoribosyltransferase compare
Psyr_1544 -3.1 -5.7 SirA-like protein compare
Psyr_4132 -3.0 -10.5 histidinol phosphate aminotransferase apoenzyme compare
Psyr_0831 -3.0 -3.9 Two-component response regulator CbrB compare
Psyr_0557 -2.9 -6.9 phosphoserine phosphatase compare
Psyr_1121 -2.9 -3.3 6-phosphogluconolactonase compare
Psyr_0951 -2.9 -3.7 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_5062 -2.9 -6.4 transcriptional regulator, LysR family compare
Psyr_3293 -2.8 -4.0 UspA compare
Psyr_4407 -2.8 -3.6 phosphoribosylamine--glycine ligase compare
Psyr_5061 -2.7 -11.9 acetyl-CoA carboxylase carboxyltransferase subunit alpha / biotin carboxylase compare
Psyr_4029 -2.6 -8.1 pyruvate kinase compare
Psyr_1542 -2.6 -10.1 quinolinate synthetase compare
Psyr_2077 -2.6 -6.9 regulatory protein, LysR:LysR, substrate-binding protein compare
Psyr_5060 -2.5 -13.5 Oxaloacetate decarboxylase, alpha subunit compare
Psyr_3904 -2.5 -8.0 Major intrinsic protein compare
Psyr_4091 -2.5 -4.7 8-oxo-dGTPase compare
Psyr_1251 -2.5 -5.7 quinoprotein compare
Psyr_3695 -2.4 -13.2 RelA/SpoT protein compare
Psyr_4126 -2.3 -12.7 adenylylsulfate kinase / sulfate adenylyltransferase subunit 1 compare
Psyr_4844 -2.2 -9.2 HAD-superfamily hydrolase, subfamily IB (PSPase-like):HAD-superfamily subfamily IB hydrolase, hypothetical 2 compare
Psyr_0033 -2.2 -4.6 tryptophan synthase, alpha chain compare
Psyr_4128 -2.2 -8.4 sulfate adenylyltransferase subunit 2 compare
Psyr_4687 -2.2 -6.2 biotin synthase compare
Psyr_0826 -2.1 -7.0 glucose-6-phosphate isomerase compare
Psyr_4341 -2.1 -6.2 thiamine-phosphate diphosphorylase compare
Psyr_4991 -2.0 -2.6 hypothetical protein compare
Psyr_0208 -2.0 -6.2 endoribonuclease L-PSP compare
Psyr_1109 -2.0 -7.8 6-phosphogluconate dehydratase compare
Psyr_4015 -1.9 -2.7 conserved domain protein compare
Psyr_2461 -1.9 -3.3 Uncharacterized conserved protein UCP030820 compare
Psyr_4882 -1.9 -7.5 protein translocase subunit secB compare
Psyr_1148 -1.9 -7.2 branched chain amino acid aminotransferase apoenzyme compare
Psyr_0383 -1.9 -2.0 Twin-arginine translocation protein TatB compare
Psyr_1953 -1.9 -1.9 conserved hypothetical protein compare
Psyr_1816 -1.9 -5.0 transcriptional regulator, GntR family compare
Psyr_1914 -1.9 -8.1 transaldolase compare
Psyr_0815 -1.9 -5.6 nicotinate-nucleotide pyrophosphorylase (carboxylating) compare
Psyr_0393 -1.8 -4.3 Protein of unknown function DUF971 compare
Psyr_1966 -1.8 -2.8 Peptidase M19, renal dipeptidase compare
Psyr_0544 -1.8 -9.4 hydroxymethylpyrimidine synthase compare
Psyr_1910 -1.8 -6.0 VacJ-like lipoprotein compare
Psyr_3013 -1.8 -2.6 magnesium chelatase subunit ChlD compare
Psyr_4684 -1.8 -1.6 biotin synthesis protein BioC compare
Psyr_3184 -1.7 -3.8 ATP-dependent Clp protease adaptor protein ClpS compare
Psyr_3690 -1.7 -5.2 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase compare
Psyr_3564 -1.7 -6.9 arginine succinyltransferase compare
Psyr_0385 -1.7 -2.6 phosphoribosyl-ATP pyrophosphatase compare
Psyr_0386 -1.6 -2.5 phosphoribosyl-AMP cyclohydrolase compare
Psyr_4127 -1.6 -4.0 S23 ribosomal compare
Psyr_1946 -1.6 -2.0 diaminobutyrate aminotransferase apoenzyme compare
Psyr_2312 -1.6 -2.0 Protein of unknown function DUF24 compare
Psyr_4018 -1.6 -7.0 Formyltetrahydrofolate deformylase compare
Psyr_1748 -1.6 -5.2 ATP-dependent Clp protease ATP-binding subunit ClpX compare
Psyr_1378 -1.5 -3.5 RecA protein compare
Psyr_1968 -1.5 -2.4 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_1864 -1.4 -3.7 spermidine synthase compare
Psyr_4683 -1.4 -2.9 dethiobiotin synthase compare
Psyr_3211 -1.4 -5.5 ATP-binding region, ATPase-like:Histidine kinase, HAMP region compare
Psyr_1120 -1.4 -6.3 glucose-6-phosphate 1-dehydrogenase compare
Psyr_1965 -1.4 -4.1 Twin-arginine translocation pathway signal compare
Psyr_4089 -1.4 -5.4 PAS compare
Psyr_4634 -1.4 -1.5 Polynucleotide adenylyltransferase:Metal-dependent phosphohydrolase, HD subdomain protein compare
Psyr_1955 -1.3 -3.2 Propeptide, PepSY amd peptidase M4:PepSY-associated TM helix compare
Psyr_3900 -1.3 -2.1 conserved hypothetical protein compare
Psyr_3886 -1.3 -2.0 methionyl-tRNA synthetase compare
Psyr_1447 -1.3 -1.7 conserved hypothetical protein compare
Psyr_4125 -1.3 -2.4 Protein of unknown function DUF1043 compare
Psyr_1969 -1.3 -5.1 ABC transporter:Protein of unknown function DUF214 compare
Psyr_2406 -1.3 -2.5 Flavin reductase-like protein compare
Psyr_3563 -1.3 -4.2 arginine succinyltransferase compare
Psyr_3193 -1.3 -2.8 Transcription factor jumonji, jmjC compare
Psyr_4627 -1.3 -2.4 dimethyladenosine transferase compare
Psyr_0454 -1.3 -3.8 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_4362 -1.3 -3.1 Rare lipoprotein A compare
Psyr_4139 -1.2 -5.0 Mce4/Rv3499c/MTV023.06c protein compare
Psyr_2557 -1.2 -2.0 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase-like protein compare
Psyr_4141 -1.2 -4.1 ABC transporter compare
Psyr_2487 -1.2 -3.1 Short-chain dehydrogenase/reductase SDR compare
Psyr_1970 -1.2 -4.7 Secretion protein HlyD compare
Psyr_1749 -1.2 -5.3 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 compare
Psyr_1962 -1.2 -7.1 TonB-dependent siderophore receptor compare
Psyr_0623 -1.2 -2.1 Peptidase S24, S26A and S26B compare
Psyr_2154 -1.2 -4.0 transcriptional regulator, LacI family compare
Psyr_1964 -1.2 -3.7 Protein of unknown function DUF323 compare
Psyr_1408 -1.2 -2.4 Holliday junction endonuclease RuvC compare
Psyr_0276 -1.2 -3.3 zinc uptake regulation protein, putative compare
Psyr_0820 -1.2 -4.7 transcriptional regulator, LacI family compare
Psyr_2617 -1.1 -1.9 Secretion protein HlyD compare
Psyr_0293 -1.1 -7.3 Polyphosphate kinase compare
Psyr_0485 -1.1 -4.4 Protein of unknown function DUF179 compare
Psyr_0085 -1.1 -2.6 conserved hypothetical protein compare
Psyr_2970 -1.1 -3.9 TPR repeat protein:TPR repeat protein compare
Psyr_3959 -1.1 -7.6 L-aspartate oxidase compare
Psyr_1247 -1.1 -1.8 conserved hypothetical protein compare
Psyr_4277 -1.1 -4.9 Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region compare
Psyr_4019 -1.1 -2.8 H-NS family protein MvaT compare
Psyr_3286 -1.1 -5.7 conserved hypothetical protein compare
Psyr_4408 -1.1 -5.1 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Histidine kinase:Histidine kinase compare
Psyr_4788 -1.1 -2.2 lipoprotein, putative compare
Psyr_2593 -1.1 -2.4 ABC transporter compare
Psyr_4686 -1.1 -3.3 8-amino-7-oxononanoate synthase compare
Psyr_2520 -1.0 -1.7 SOS-response transcriptional repressor, LexA compare
Psyr_2014 -1.0 -2.6 conserved hypothetical protein compare
Psyr_0835 -1.0 -3.8 transcriptional regulator, TraR/DksA family compare
Psyr_3581 -1.0 -4.6 ribosomal large subunit pseudouridine synthase B compare
Psyr_1638 -1.0 -2.3 RNAse E compare
Psyr_0464 -1.0 -2.3 hypothetical protein compare
Psyr_4464 -1.0 -1.2 lipoprotein, putative compare
Psyr_3565 -1.0 -4.2 succinylornithine aminotransferase apoenzyme / acetylornithine aminotransferase apoenzyme compare
Psyr_3287 -1.0 -1.8 DNA topoisomerase I compare
Psyr_2586 -1.0 -3.3 Drug resistance transporter EmrB/QacA subfamily compare
Psyr_2747 -1.0 -3.0 amino acid/amide ABC transporter substrate-binding protein, HAAT family compare
Psyr_3674 -1.0 -1.5 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase compare
Psyr_1780 -1.0 -2.0 transcriptional regulator, TetR family compare
Psyr_1350 -1.0 -1.9 site-2 protease, Metallo peptidase, MEROPS family M50B compare
Psyr_0176 -0.9 -2.3 conserved hypothetical protein compare
Psyr_1937 -0.9 -2.1 UspA compare
Psyr_3545 -0.9 -2.9 Short-chain dehydrogenase/reductase SDR compare
Psyr_2872 -0.9 -2.0 hypothetical protein compare
Psyr_2483 -0.9 -6.3 Acriflavin resistance protein compare
Psyr_4151 -0.9 -1.1 Phosphocarrier HPr protein compare
Psyr_3644 -0.9 -2.2 prephenate dehydrogenase compare
Psyr_4228 -0.9 -4.8 transcriptional regulator, GntR family compare
Psyr_4460 -0.9 -1.9 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II compare
Psyr_1796 -0.9 -2.3 GCN5-related N-acetyltransferase compare
Psyr_4799 -0.9 -4.3 Heavy metal sensor kinase compare
Psyr_3199 -0.9 -2.1 NADH dehydrogenase subunit D / NADH dehydrogenase subunit C compare
Psyr_2265 -0.9 -2.5 Binding-protein-dependent transport systems inner membrane component compare
Psyr_0201 -0.9 -4.4 ATP-dependent DNA helicase RecG compare
Psyr_2933 -0.9 -2.2 transcriptional regulator, TetR family compare
Psyr_3648 -0.9 -4.3 methylthioribose-1-phosphate isomerase compare
Psyr_3561 -0.9 -4.0 succinylarginine dihydrolase compare
Psyr_0832 -0.9 -4.2 Two-component sensor kinase CbrA compare
Psyr_0579 -0.9 -5.9 RNAse R compare
Psyr_1973 -0.9 -1.7 Aspartate transaminase compare
Psyr_2808 -0.9 -1.2 hypothetical protein compare
Psyr_3896 -0.9 -1.3 BFD-like [2Fe-2S]-binding region compare
Psyr_3446 -0.9 -1.8 Surface presentation of antigens (SPOA) protein compare
Psyr_3955 -0.9 -3.4 Peptidase S1, chymotrypsin:PDZ/DHR/GLGF compare
Psyr_1747 -0.9 -2.2 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_3755 -0.8 -1.2 conserved hypothetical protein compare
Psyr_3889 -0.8 -2.1 conserved hypothetical protein compare
Psyr_4155 -0.8 -1.6 Protein of unknown function DUF615 compare
Psyr_0081 -0.8 -1.2 ABC transporter compare
Psyr_4898 -0.8 -4.5 aromatic amino acid aminotransferase apoenzyme compare
Psyr_1266 -0.8 -4.2 Twin-arginine translocation pathway signal compare
Psyr_4006 -0.8 -4.3 transcriptional regulator, TetR family compare
Psyr_0534 -0.8 -6.5 membrane protein, putative compare
Psyr_2592 -0.8 -3.6 transport system permease protein compare
Psyr_0724 -0.8 -1.6 conserved hypothetical protein compare
Psyr_3337 -0.8 -1.7 gluconate kinase, SKI family compare
Psyr_1949 -0.8 -2.7 ABC-3 compare
Psyr_0919 -0.8 -4.9 Chromosome segregation ATPase-like protein compare
Psyr_2402 -0.8 -2.9 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II compare
Psyr_1948 -0.8 -1.9 ABC transporter, periplasmic substrate-binding protein, putative compare
Psyr_3142 -0.8 -1.5 general secretion pathway protein N, putative compare
Psyr_0491 -0.8 -1.5 chemotaxis sensory transducer compare


Specific Phenotypes

For 8 genes in this experiment

For carbon source Glycerol in Pseudomonas syringae pv. syringae B728a

For carbon source Glycerol across organisms