Experiment set7IT006 for Pantoea sp. MT58
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
Group: survivalMedia: + Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
Culturing: MT058_ML2, tube, Aerobic, at 30 (C)
By: Mike Thorgersen on 7/11/22
Specific Phenotypes
For 17 genes in this experiment
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Homogentisate pathway of aromatic compound degradation | 1 |
| Purine conversions | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
- Purine metabolism
- Puromycin biosynthesis
- Nucleotide sugars metabolism
- alpha-Linolenic acid metabolism
- Trinitrotoluene degradation
- Porphyrin and chlorophyll metabolism
- Carotenoid biosynthesis - General
- Alkaloid biosynthesis I
- Insect hormone biosynthesis
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| purine deoxyribonucleosides degradation II | 3 | 3 | 1 |
| adenine and adenosine salvage V | 3 | 3 | 1 |
| methylglyoxal degradation I | 3 | 2 | 1 |
| methylglyoxal degradation VIII | 3 | 2 | 1 |
| adenine and adenosine salvage III | 4 | 4 | 1 |
| purine deoxyribonucleosides degradation I | 4 | 4 | 1 |
| adenosine nucleotides degradation II | 5 | 5 | 1 |
| purine ribonucleosides degradation | 6 | 6 | 1 |
| superpathway of purine deoxyribonucleosides degradation | 7 | 7 | 1 |
| superpathway of methylglyoxal degradation | 8 | 5 | 1 |
| purine nucleotides degradation II (aerobic) | 11 | 11 | 1 |