Experiment set7IT005 for Pseudomonas syringae pv. syringae B728a

Compare to:

Sucrose carbon source

200 most important genes:

  gene name fitness t score description  
Psyr_1984 -6.0 -4.1 3-isopropylmalate dehydratase, small subunit compare
Psyr_0473 -4.6 -3.2 Methionine biosynthesis MetW compare
Psyr_1983 -4.4 -7.1 3-isopropylmalate dehydratase, large subunit compare
Psyr_1985 -4.4 -7.2 3-isopropylmalate dehydrogenase compare
Psyr_4894 -4.1 -8.6 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
Psyr_4134 -4.0 -10.2 ATP phosphoribosyltransferase (homohexameric) compare
Psyr_1663 -4.0 -3.9 phosphoribosylanthranilate isomerase compare
Psyr_4270 -4.0 -9.7 serine hydroxymethyltransferase compare
Psyr_1669 -3.9 -8.6 O-succinylhomoserine sulfhydrylase compare
Psyr_4897 -3.9 -4.5 imidazoleglycerol-phosphate dehydratase compare
Psyr_0951 -3.8 -2.6 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_0848 -3.8 -8.2 ketol-acid reductoisomerase compare
Psyr_4609 -3.7 -14.5 anthranilate synthase, component I compare
Psyr_0033 -3.7 -4.4 tryptophan synthase, alpha chain compare
Psyr_2462 -3.7 -8.5 Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region compare
Psyr_1544 -3.6 -5.4 SirA-like protein compare
Psyr_4369 -3.6 -6.3 glutamate-5-semialdehyde dehydrogenase compare
Psyr_0034 -3.6 -2.5 tryptophan synthase, beta chain compare
Psyr_1108 -3.6 -12.5 glyceraldehyde-3-phosphate dehydrogenase compare
Psyr_1914 -3.5 -10.1 transaldolase compare
Psyr_0846 -3.5 -12.6 acetolactate synthase, large subunit compare
Psyr_0412 -3.5 -12.1 glutamate synthase (NADPH) small subunit compare
Psyr_0411 -3.5 -18.7 glutamate synthase (NADPH) large subunit compare
Psyr_4893 -3.5 -1.8 imidazole glycerol phosphate synthase subunit hisF compare
Psyr_4580 -3.5 -5.5 anthranilate phosphoribosyltransferase compare
Psyr_0827 -3.4 -5.8 pantothenate synthetase compare
Psyr_1120 -3.3 -9.6 glucose-6-phosphate 1-dehydrogenase compare
Psyr_2077 -3.2 -7.1 regulatory protein, LysR:LysR, substrate-binding protein compare
Psyr_4133 -3.2 -13.9 histidinol dehydrogenase compare
Psyr_0917 -3.2 -10.3 ABC-2 compare
Psyr_4340 -3.2 -8.9 phosphomethylpyrimidine kinase, putative compare
Psyr_4788 -3.1 -2.9 lipoprotein, putative compare
Psyr_3174 -3.1 -5.7 uroporphyrinogen-III C-methyltransferase / precorrin-2 dehydrogenase compare
Psyr_4940 -3.1 -3.0 3'(2'),5'-bisphosphate nucleotidase compare
Psyr_1109 -3.1 -9.7 6-phosphogluconate dehydratase compare
Psyr_1542 -3.1 -11.9 quinolinate synthetase compare
Psyr_0847 -3.1 -8.7 acetolactate synthase, small subunit compare
Psyr_4896 -3.0 -6.6 imidazole glycerol phosphate synthase subunit hisH compare
Psyr_1269 -3.0 -5.5 phosphoribosylformylglycinamidine synthase compare
Psyr_4407 -3.0 -2.8 phosphoribosylamine--glycine ligase compare
Psyr_4341 -2.9 -7.7 thiamine-phosphate diphosphorylase compare
Psyr_4754 -2.9 -2.5 16S rRNA m(2)G-966 methyltransferase compare
Psyr_0815 -2.9 -6.5 nicotinate-nucleotide pyrophosphorylase (carboxylating) compare
Psyr_0469 -2.8 -9.3 dihydroxyacid dehydratase compare
Psyr_0704 -2.7 -8.3 glutamate 5-kinase compare
Psyr_1668 -2.7 -7.8 amidophosphoribosyltransferase compare
Psyr_0918 -2.7 -13.4 ABC transporter compare
Psyr_0474 -2.6 -9.9 homoserine O-acetyltransferase compare
Psyr_4091 -2.6 -5.7 8-oxo-dGTPase compare
Psyr_4740 -2.5 -6.5 thiazole-phosphate synthase compare
Psyr_4132 -2.5 -7.9 histidinol phosphate aminotransferase apoenzyme compare
Psyr_0831 -2.4 -3.5 Two-component response regulator CbrB compare
Psyr_4852 -2.4 -8.4 D-3-phosphoglycerate dehydrogenase compare
Psyr_0557 -2.4 -4.7 phosphoserine phosphatase compare
Psyr_1965 -2.4 -6.2 Twin-arginine translocation pathway signal compare
Psyr_0826 -2.4 -6.8 glucose-6-phosphate isomerase compare
Psyr_1121 -2.4 -2.8 6-phosphogluconolactonase compare
Psyr_0386 -2.3 -3.6 phosphoribosyl-AMP cyclohydrolase compare
Psyr_0758 -2.3 -15.4 beta-fructofuranosidase compare
Psyr_0385 -2.3 -3.2 phosphoribosyl-ATP pyrophosphatase compare
Psyr_0215 -2.2 -9.3 Exodeoxyribonuclease III xth compare
Psyr_5060 -2.1 -12.0 Oxaloacetate decarboxylase, alpha subunit compare
Psyr_1963 -2.1 -5.1 Cyclic peptide transporter compare
Psyr_3690 -2.1 -4.4 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase compare
Psyr_0208 -2.0 -6.7 endoribonuclease L-PSP compare
Psyr_1257 -2.0 -7.0 2-isopropylmalate synthase compare
Psyr_0576 -2.0 -3.7 ATP phosphoribosyltransferase regulatory subunit, putative compare
Psyr_2461 -2.0 -3.3 Uncharacterized conserved protein UCP030820 compare
Psyr_4687 -2.0 -6.3 biotin synthase compare
Psyr_3198 -1.9 -2.9 NADH dehydrogenase subunit B compare
Psyr_5062 -1.9 -4.6 transcriptional regulator, LysR family compare
Psyr_5061 -1.9 -8.8 acetyl-CoA carboxylase carboxyltransferase subunit alpha / biotin carboxylase compare
Psyr_2838 -1.8 -2.4 conserved hypothetical protein compare
Psyr_4682 -1.8 -1.9 conserved hypothetical protein compare
Psyr_2970 -1.8 -4.4 TPR repeat protein:TPR repeat protein compare
Psyr_4844 -1.8 -6.3 HAD-superfamily hydrolase, subfamily IB (PSPase-like):HAD-superfamily subfamily IB hydrolase, hypothetical 2 compare
Psyr_4567 -1.8 -5.0 Protein of unknown function UPF0075 compare
Psyr_3695 -1.8 -9.2 RelA/SpoT protein compare
Psyr_4460 -1.8 -2.9 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II compare
Psyr_3008 -1.7 -5.2 Undecaprenyl-diphosphatase compare
Psyr_4029 -1.6 -6.5 pyruvate kinase compare
Psyr_4139 -1.6 -5.7 Mce4/Rv3499c/MTV023.06c protein compare
Psyr_4581 -1.6 -1.8 anthranilate synthase, component II compare
Psyr_3202 -1.6 -1.9 NADH dehydrogenase subunit G compare
Psyr_4128 -1.6 -5.9 sulfate adenylyltransferase subunit 2 compare
Psyr_2593 -1.6 -3.7 ABC transporter compare
Psyr_0832 -1.6 -6.8 Two-component sensor kinase CbrA compare
Psyr_3955 -1.6 -4.2 Peptidase S1, chymotrypsin:PDZ/DHR/GLGF compare
Psyr_3293 -1.5 -1.5 UspA compare
Psyr_0544 -1.5 -7.1 hydroxymethylpyrimidine synthase compare
Psyr_1816 -1.5 -3.9 transcriptional regulator, GntR family compare
Psyr_4015 -1.5 -1.9 conserved domain protein compare
Psyr_2747 -1.5 -3.2 amino acid/amide ABC transporter substrate-binding protein, HAAT family compare
Psyr_3959 -1.4 -8.5 L-aspartate oxidase compare
Psyr_3013 -1.4 -2.6 magnesium chelatase subunit ChlD compare
Psyr_3199 -1.4 -2.5 NADH dehydrogenase subunit D / NADH dehydrogenase subunit C compare
Psyr_1966 -1.4 -3.0 Peptidase M19, renal dipeptidase compare
Psyr_0454 -1.4 -4.0 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_4362 -1.4 -2.4 Rare lipoprotein A compare
Psyr_4019 -1.4 -2.9 H-NS family protein MvaT compare
Psyr_1251 -1.4 -4.0 quinoprotein compare
Psyr_2143 -1.4 -2.1 delta1-piperideine 2-carboxylate reductase compare
Psyr_4463 -1.4 -3.6 Protein of unknown function DUF193 compare
Psyr_1008 -1.4 -2.0 conserved hypothetical protein compare
Psyr_0761 -1.4 -5.3 carbohydrate ABC transporter membrane protein 1, CUT1 family conserved
Psyr_1968 -1.4 -3.5 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_2449 -1.4 -4.0 Response regulator receiver compare
Psyr_2312 -1.3 -1.6 Protein of unknown function DUF24 compare
Psyr_4161 -1.3 -2.0 Rod shape-determining protein MreD compare
Psyr_3805 -1.3 -1.8 hypothetical protein compare
Psyr_2201 -1.3 -2.4 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family compare
Psyr_0759 -1.3 -6.3 carbohydrate ABC transporter ATP-binding protein, CUT1 family conserved
Psyr_1964 -1.3 -3.4 Protein of unknown function DUF323 compare
Psyr_0574 -1.3 -4.1 protease FtsH subunit HflK compare
Psyr_1998 -1.2 -3.2 lipoprotein, putative compare
Psyr_4277 -1.2 -3.9 Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region compare
Psyr_0849 -1.2 -7.1 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_1970 -1.2 -3.7 Secretion protein HlyD compare
Psyr_2590 -1.2 -3.0 Periplasmic binding protein compare
Psyr_2765 -1.2 -2.7 conserved domain protein compare
Psyr_0970 -1.2 -3.2 Phosphoribosyltransferase compare
Psyr_4991 -1.2 -2.0 hypothetical protein compare
Psyr_2137 -1.2 -2.4 molybdopterin molybdochelatase compare
Psyr_1148 -1.2 -4.3 branched chain amino acid aminotransferase apoenzyme compare
Psyr_2980 -1.2 -2.6 UDP-glucose pyrophosphorylase compare
Psyr_1953 -1.2 -1.2 conserved hypothetical protein compare
Psyr_1933 -1.2 -2.8 hypothetical protein compare
Psyr_4408 -1.1 -5.1 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Histidine kinase:Histidine kinase compare
Psyr_1748 -1.1 -3.7 ATP-dependent Clp protease ATP-binding subunit ClpX compare
Psyr_4380 -1.1 -2.2 translation initiation factor 1 (eIF-1/SUI1) compare
Psyr_4361 -1.1 -2.5 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 compare
Psyr_4113 -1.1 -6.0 LppC putative lipoprotein compare
Psyr_4920 -1.1 -1.9 conserved hypothetical bacteriophage protein compare
Psyr_2906 -1.1 -2.2 Pilus retraction protein PilT compare
Psyr_4126 -1.1 -7.2 adenylylsulfate kinase / sulfate adenylyltransferase subunit 1 compare
Psyr_1091 -1.1 -4.1 aminopeptidase A, Metallo peptidase, MEROPS family M17 compare
Psyr_4683 -1.1 -2.4 dethiobiotin synthase compare
Psyr_1910 -1.1 -3.7 VacJ-like lipoprotein compare
Psyr_2446 -1.1 -3.3 MCP methyltransferase, CheR-type compare
Psyr_0264 -1.1 -2.7 Alginate biosynthesis sensor protein KinB compare
Psyr_3450 -1.1 -2.3 Hpt compare
Psyr_1613 -1.1 -2.7 septum site-determining protein MinC compare
Psyr_1749 -1.1 -4.8 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 compare
Psyr_1717 -1.1 -1.8 TPR repeat:von Willebrand factor, type A compare
Psyr_0268 -1.1 -2.2 DSBA oxidoreductase compare
Psyr_0762 -1.1 -6.0 carbohydrate ABC transporter substrate-binding protein, CUT1 family conserved
Psyr_4882 -1.1 -3.9 protein translocase subunit secB compare
Psyr_0176 -1.1 -1.4 conserved hypothetical protein compare
Psyr_0232 -1.1 -5.4 gamma-glutamylputrescine oxidase compare
Psyr_4622 -1.1 -2.9 Nucleotidyl transferase compare
Psyr_4141 -1.1 -3.3 ABC transporter compare
Psyr_1596 -1.1 -1.3 Helix-turn-helix motif protein compare
Psyr_0760 -1.1 -4.0 carbohydrate ABC transporter membrane protein 2, CUT1 family compare
Psyr_3554 -1.1 -1.1 Carbon storage regulator compare
Psyr_2244 -1.0 -0.9 DNA topoisomerase III compare
Psyr_0441 -1.0 -2.0 conserved hypothetical protein compare
Psyr_0433 -1.0 -3.2 Glycosyl transferase, family 2 compare
Psyr_3889 -1.0 -2.2 conserved hypothetical protein compare
Psyr_4153 -1.0 -2.7 conserved hypothetical protein compare
Psyr_2031 -1.0 -3.0 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal compare
Psyr_5135 -1.0 -0.5 Protein of unknown function DUF37 compare
Psyr_2402 -1.0 -3.0 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II compare
Psyr_4203 -1.0 -1.1 SsrA-binding protein compare
Psyr_0255 -1.0 -1.2 glutamate-cysteine ligase compare
Psyr_1090 -1.0 -3.7 DNA polymerase III, chi subunit compare
Psyr_0338 -1.0 -2.5 ABC transporter compare
Psyr_4151 -1.0 -1.0 Phosphocarrier HPr protein compare
Psyr_2420 -1.0 -2.8 conserved hypothetical protein compare
Psyr_1903 -1.0 -1.9 conserved hypothetical protein compare
Psyr_1528 -0.9 -2.3 Arc-like DNA binding protein compare
Psyr_2618 -0.9 -3.4 ABC transporter:Protein of unknown function DUF214 compare
Psyr_3208 -0.9 -1.7 NADH dehydrogenase subunit M compare
Psyr_2502 -0.9 -2.2 conserved hypothetical protein compare
Psyr_1581 -0.9 -2.4 conserved hypothetical protein compare
Psyr_3162 -0.9 -1.9 Metalloprotease inhibitor/calysin compare
Psyr_2851 -0.9 -1.8 conserved hypothetical protein compare
Psyr_3564 -0.9 -3.9 arginine succinyltransferase compare
Psyr_0349 -0.9 -1.6 Binding-protein-dependent transport systems inner membrane component compare
Psyr_4100 -0.9 -3.0 D-alanine--D-alanine ligase compare
Psyr_1930 -0.9 -2.1 hypothetical protein compare
Psyr_3286 -0.9 -3.9 conserved hypothetical protein compare
Psyr_2591 -0.9 -3.7 transport system permease protein compare
Psyr_4884 -0.9 -3.5 Rhodanese-like protein compare
Psyr_3319 -0.9 -3.6 ThiJ/PfpI compare
Psyr_1247 -0.9 -1.4 conserved hypothetical protein compare
Psyr_4014 -0.9 -4.7 regulatory protein, IclR compare
Psyr_5071 -0.9 -2.4 conserved hypothetical protein compare
Psyr_2213 -0.9 -2.7 transcriptional regulator, AraC family compare
Psyr_1505 -0.9 -1.3 Protein of unknown function DUF156 compare
Psyr_3702 -0.9 -1.8 Arsenate reductase compare
Psyr_0953 -0.9 -4.6 conserved hypothetical protein compare
Psyr_3581 -0.9 -3.1 ribosomal large subunit pseudouridine synthase B compare
Psyr_4686 -0.9 -2.3 8-amino-7-oxononanoate synthase compare
Psyr_3367 -0.8 -1.9 Iron permease FTR1 compare
Psyr_1037 -0.8 -2.0 ribosomal subunit interface protein, putative compare
Psyr_4152 -0.8 -3.7 Superoxide dismutase compare
Psyr_0293 -0.8 -5.2 Polyphosphate kinase compare
Psyr_1111 -0.8 -0.8 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_1962 -0.8 -4.7 TonB-dependent siderophore receptor compare
Psyr_3612 -0.8 -3.1 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal compare


Specific Phenotypes

For 13 genes in this experiment

For carbon source Sucrose in Pseudomonas syringae pv. syringae B728a

For carbon source Sucrose across organisms