Experiment set7IT003 for Pseudomonas syringae pv. syringae B728a

Compare to:

4-hydroxybutyric acid carbon source

Genes with specific phenotypes:

  gene name fitness t score description  
Psyr_1318 -4.1 -7.7 Phosphoenolpyruvate carboxylase compare
Psyr_3196 -3.9 -9.6 isocitrate lyase compare
Psyr_4700 -3.7 -13.9 malate synthase compare
Psyr_3237 -3.5 -7.1 3-oxoacid CoA-transferase compare
Psyr_0824 -3.5 -6.8 acetyl-CoA acetyltransferase compare
Psyr_3238 -3.4 -7.2 3-oxoacid CoA-transferase compare
Psyr_0317 -3.4 -8.2 5-formyltetrahydrofolate cyclo-ligase compare
Psyr_1563 -3.2 -7.2 Ribonuclease D compare
Psyr_3572 -3.2 -16.0 acetyl-coenzyme A synthetase compare
Psyr_0401 -3.2 -13.2 Malate dehydrogenase (oxaloacetate decarboxylating) (NADP+) compare
Psyr_2464 -3.0 -8.7 methionine synthase (B12-dependent) compare
Psyr_2324 -2.9 -7.2 conserved hypothetical protein compare
Psyr_3236 -2.5 -6.2 transcriptional regulator, LysR family compare
Psyr_3211 -2.4 -6.8 ATP-binding region, ATPase-like:Histidine kinase, HAMP region compare
Psyr_1119 -2.3 -9.1 Helix-turn-helix protein RpiR:Sugar isomerase (SIS) compare
Psyr_1962 -2.2 -10.3 TonB-dependent siderophore receptor compare
Psyr_1254 -2.2 -11.3 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase compare
Psyr_4414 -2.1 -6.4 precorrin-3 methyltransferase compare
Psyr_1066 -2.1 -9.1 PhoH-like protein compare
Psyr_0833 -2.0 -5.9 conserved hypothetical protein compare
Psyr_0859 -1.9 -7.7 Carbonate dehydratase compare
Psyr_0548 -1.9 -6.1 Protein of unknown function DUF1249 compare
Psyr_3275 -1.9 -8.6 Helix-turn-helix protein RpiR:Sugar isomerase (SIS) compare
Psyr_3015 -1.8 -7.2 cobaltochelatase CobN subunit compare
Psyr_2485 -1.8 -7.9 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_2483 -1.7 -9.9 Acriflavin resistance protein compare
Psyr_1585 -1.7 -7.4 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal compare
Psyr_0286 -1.7 -5.6 conserved hypothetical protein compare
Psyr_2405 -1.6 -6.3 transcriptional regulator, GntR family compare
Psyr_0173 -1.6 -7.0 SSU ribosomal protein S6P modification protein compare
Psyr_4159 -1.5 -6.8 RNAse G compare
Psyr_0459 -1.4 -7.7 5,10-methylenetetrahydrofolate reductase compare
Psyr_2484 -1.4 -7.7 Acriflavin resistance protein compare
Psyr_0648 -1.4 -5.3 transporter, putative compare
Psyr_1757 -1.4 -6.9 Binding-protein-dependent transport systems inner membrane component compare
Psyr_0519 -1.3 -5.1 Glutamate-ammonia-ligase adenylyltransferase compare
Psyr_1756 -1.1 -5.6 Binding-protein-dependent transport systems inner membrane component compare
Psyr_3498 -1.1 -5.9 Conserved hypothetical protein 730 compare
Psyr_0063 -1.0 -5.5 Two-component response regulator AlgR compare
Psyr_4573 -1.0 -6.3 Histidine triad (HIT) protein compare
Psyr_0213 +1.4 8.3 RNAse PH compare
Psyr_2090 +1.4 8.6 phosphoenolpyruvate synthase compare
Psyr_1374 +1.8 12.4 RNA polymerase, sigma 38 subunit, RpoS compare


Specific phenotypes for carbon source 4-hydroxybutyric acid across organisms