Experiment set7IT003 for Pseudomonas syringae pv. syringae B728a

Compare to:

4-hydroxybutyric acid carbon source

200 most important genes:

  gene name fitness t score description  
Psyr_1984 -6.0 -4.1 3-isopropylmalate dehydratase, small subunit compare
Psyr_4894 -4.7 -7.8 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
Psyr_4897 -4.7 -3.2 imidazoleglycerol-phosphate dehydratase compare
Psyr_1983 -4.5 -6.7 3-isopropylmalate dehydratase, large subunit compare
Psyr_3013 -4.3 -3.9 magnesium chelatase subunit ChlD compare
Psyr_4277 -4.1 -7.3 Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region compare
Psyr_4133 -4.1 -11.1 histidinol dehydrogenase compare
Psyr_1318 -4.1 -7.7 Phosphoenolpyruvate carboxylase compare
Psyr_4369 -4.0 -6.0 glutamate-5-semialdehyde dehydrogenase compare
Psyr_4609 -4.0 -11.9 anthranilate synthase, component I compare
Psyr_3196 -3.9 -9.6 isocitrate lyase compare
Psyr_1985 -3.9 -7.8 3-isopropylmalate dehydrogenase compare
Psyr_4134 -3.9 -9.9 ATP phosphoribosyltransferase (homohexameric) compare
Psyr_1257 -3.9 -10.5 2-isopropylmalate synthase compare
Psyr_4740 -3.9 -5.8 thiazole-phosphate synthase compare
Psyr_0469 -3.9 -7.8 dihydroxyacid dehydratase compare
Psyr_0847 -3.8 -6.3 acetolactate synthase, small subunit compare
Psyr_1269 -3.8 -4.4 phosphoribosylformylglycinamidine synthase compare
Psyr_4132 -3.8 -10.9 histidinol phosphate aminotransferase apoenzyme compare
Psyr_0827 -3.8 -5.1 pantothenate synthetase compare
Psyr_4896 -3.8 -8.1 imidazole glycerol phosphate synthase subunit hisH compare
Psyr_0846 -3.7 -11.8 acetolactate synthase, large subunit compare
Psyr_0917 -3.7 -7.5 ABC-2 compare
Psyr_2462 -3.7 -7.5 Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region compare
Psyr_4700 -3.7 -13.9 malate synthase compare
Psyr_3695 -3.7 -12.1 RelA/SpoT protein compare
Psyr_1544 -3.7 -4.3 SirA-like protein compare
Psyr_0704 -3.6 -9.5 glutamate 5-kinase compare
Psyr_4270 -3.6 -9.2 serine hydroxymethyltransferase compare
Psyr_1148 -3.6 -6.4 branched chain amino acid aminotransferase apoenzyme compare
Psyr_0848 -3.6 -7.9 ketol-acid reductoisomerase compare
Psyr_0473 -3.6 -6.3 Methionine biosynthesis MetW compare
Psyr_4340 -3.6 -6.7 phosphomethylpyrimidine kinase, putative compare
Psyr_4407 -3.6 -2.4 phosphoribosylamine--glycine ligase compare
Psyr_0411 -3.5 -16.3 glutamate synthase (NADPH) large subunit compare
Psyr_0412 -3.5 -11.2 glutamate synthase (NADPH) small subunit compare
Psyr_0831 -3.5 -3.3 Two-component response regulator CbrB compare
Psyr_1914 -3.5 -10.0 transaldolase compare
Psyr_3237 -3.5 -7.1 3-oxoacid CoA-transferase compare
Psyr_0824 -3.5 -6.8 acetyl-CoA acetyltransferase compare
Psyr_3238 -3.4 -7.2 3-oxoacid CoA-transferase compare
Psyr_4844 -3.4 -11.3 HAD-superfamily hydrolase, subfamily IB (PSPase-like):HAD-superfamily subfamily IB hydrolase, hypothetical 2 compare
Psyr_4893 -3.4 -1.9 imidazole glycerol phosphate synthase subunit hisF compare
Psyr_0544 -3.4 -11.7 hydroxymethylpyrimidine synthase compare
Psyr_0034 -3.4 -3.3 tryptophan synthase, beta chain compare
Psyr_0976 -3.4 -3.3 Malate:quinone-oxidoreductase compare
Psyr_0918 -3.4 -13.8 ABC transporter compare
Psyr_4852 -3.4 -8.3 D-3-phosphoglycerate dehydrogenase compare
Psyr_0317 -3.4 -8.2 5-formyltetrahydrofolate cyclo-ligase compare
Psyr_0474 -3.4 -9.5 homoserine O-acetyltransferase compare
Psyr_3674 -3.4 -4.4 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase compare
Psyr_1350 -3.4 -5.0 site-2 protease, Metallo peptidase, MEROPS family M50B compare
Psyr_1669 -3.4 -9.9 O-succinylhomoserine sulfhydrylase compare
Psyr_4627 -3.3 -2.3 dimethyladenosine transferase compare
Psyr_3020 -3.3 -3.0 precorrin-4 C11-methyltransferase compare
Psyr_1663 -3.3 -5.6 phosphoribosylanthranilate isomerase compare
Psyr_1563 -3.2 -7.2 Ribonuclease D compare
Psyr_3572 -3.2 -16.0 acetyl-coenzyme A synthetase compare
Psyr_0951 -3.2 -3.0 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_4091 -3.2 -6.8 8-oxo-dGTPase compare
Psyr_0401 -3.2 -13.2 Malate dehydrogenase (oxaloacetate decarboxylating) (NADP+) compare
Psyr_2077 -3.2 -7.2 regulatory protein, LysR:LysR, substrate-binding protein compare
Psyr_0830 -3.1 -7.8 Poly(A) polymerase compare
Psyr_2464 -3.0 -8.7 methionine synthase (B12-dependent) compare
Psyr_1963 -3.0 -7.9 Cyclic peptide transporter compare
Psyr_3293 -3.0 -3.6 UspA compare
Psyr_1668 -3.0 -7.2 amidophosphoribosyltransferase compare
Psyr_3681 -2.9 -3.3 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
Psyr_4842 -2.9 -9.2 Phosphoenolpyruvate-protein phosphotransferase compare
Psyr_3202 -2.9 -3.3 NADH dehydrogenase subunit G compare
Psyr_2324 -2.9 -7.2 conserved hypothetical protein compare
Psyr_3174 -2.9 -5.8 uroporphyrinogen-III C-methyltransferase / precorrin-2 dehydrogenase compare
Psyr_3680 -2.9 -6.7 hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) / cobyrinate a,c-diamide synthase compare
Psyr_4580 -2.9 -4.1 anthranilate phosphoribosyltransferase compare
Psyr_0033 -2.8 -5.2 tryptophan synthase, alpha chain compare
Psyr_3672 -2.7 -4.5 cobalamin-5'-phosphate synthase compare
Psyr_4417 -2.6 -2.5 Ferredoxin--nitrite reductase compare
Psyr_0832 -2.6 -5.9 Two-component sensor kinase CbrA compare
Psyr_3673 -2.5 -3.2 Phosphoglycerate/bisphosphoglycerate mutase compare
Psyr_3236 -2.5 -6.2 transcriptional regulator, LysR family compare
Psyr_4683 -2.5 -2.3 dethiobiotin synthase compare
Psyr_0557 -2.5 -7.0 phosphoserine phosphatase compare
Psyr_3690 -2.4 -5.4 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase compare
Psyr_0845 -2.4 -2.1 conserved hypothetical protein compare
Psyr_3211 -2.4 -6.8 ATP-binding region, ATPase-like:Histidine kinase, HAMP region compare
Psyr_1119 -2.3 -9.1 Helix-turn-helix protein RpiR:Sugar isomerase (SIS) compare
Psyr_4882 -2.3 -7.6 protein translocase subunit secB compare
Psyr_4843 -2.3 -6.8 NUDIX hydrolase compare
Psyr_4418 -2.2 -2.5 Precorrin-6Y C5,15-methyltransferase (decarboxylating) compare
Psyr_0835 -2.2 -5.6 transcriptional regulator, TraR/DksA family compare
Psyr_4567 -2.2 -6.0 Protein of unknown function UPF0075 compare
Psyr_1962 -2.2 -10.3 TonB-dependent siderophore receptor compare
Psyr_5133 -2.2 -4.0 tRNA modification GTPase trmE compare
Psyr_4415 -2.2 -8.4 cobalt-factor II C20-methyltransferase / precorrin-2 C20-methyltransferase compare
Psyr_4887 -2.2 -10.6 Peptidase S41A, C-terminal protease compare
Psyr_1254 -2.2 -11.3 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase compare
Psyr_4341 -2.1 -6.0 thiamine-phosphate diphosphorylase compare
Psyr_4414 -2.1 -6.4 precorrin-3 methyltransferase compare
Psyr_0386 -2.1 -2.6 phosphoribosyl-AMP cyclohydrolase compare
Psyr_1066 -2.1 -9.1 PhoH-like protein compare
Psyr_1965 -2.1 -5.4 Twin-arginine translocation pathway signal compare
Psyr_1280 -2.1 -4.3 Cytochrome c assembly protein compare
Psyr_0493 -2.1 -3.2 CheW-like protein compare
Psyr_0454 -2.1 -4.6 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_0534 -2.0 -13.7 membrane protein, putative compare
Psyr_0833 -2.0 -5.9 conserved hypothetical protein compare
Psyr_4408 -2.0 -6.1 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Histidine kinase:Histidine kinase compare
Psyr_3450 -2.0 -5.0 Hpt compare
Psyr_0014 -2.0 -5.1 lipid A biosynthesis acyltransferase compare
Psyr_1864 -2.0 -4.6 spermidine synthase compare
Psyr_3290 -2.0 -3.9 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase compare
Psyr_2461 -1.9 -4.2 Uncharacterized conserved protein UCP030820 compare
Psyr_4136 -1.9 -2.1 BolA-like protein compare
Psyr_0859 -1.9 -7.7 Carbonate dehydratase compare
Psyr_4089 -1.9 -6.2 PAS compare
Psyr_3199 -1.9 -3.5 NADH dehydrogenase subunit D / NADH dehydrogenase subunit C compare
Psyr_0293 -1.9 -11.6 Polyphosphate kinase compare
Psyr_0025 -1.9 -3.7 shikimate dehydrogenase compare
Psyr_0548 -1.9 -6.1 Protein of unknown function DUF1249 compare
Psyr_1955 -1.9 -3.7 Propeptide, PepSY amd peptidase M4:PepSY-associated TM helix compare
Psyr_0574 -1.9 -4.8 protease FtsH subunit HflK compare
Psyr_3198 -1.9 -2.7 NADH dehydrogenase subunit B compare
Psyr_3275 -1.9 -8.6 Helix-turn-helix protein RpiR:Sugar isomerase (SIS) compare
Psyr_4991 -1.9 -2.3 hypothetical protein compare
Psyr_2980 -1.9 -4.0 UDP-glucose pyrophosphorylase compare
Psyr_1966 -1.8 -3.3 Peptidase M19, renal dipeptidase compare
Psyr_3008 -1.8 -5.6 Undecaprenyl-diphosphatase compare
Psyr_0393 -1.8 -4.1 Protein of unknown function DUF971 compare
Psyr_3015 -1.8 -7.2 cobaltochelatase CobN subunit compare
Psyr_2485 -1.8 -7.9 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_1686 -1.8 -4.4 Metallophosphoesterase compare
Psyr_0857 -1.8 -3.4 [SSU ribosomal protein S18P]-alanine acetyltransferase compare
Psyr_0231 -1.7 -2.4 conserved hypothetical protein compare
Psyr_3678 -1.7 -5.8 adenosylcobinamide-phosphate synthase compare
Psyr_0576 -1.7 -2.4 ATP phosphoribosyltransferase regulatory subunit, putative compare
Psyr_2483 -1.7 -9.9 Acriflavin resistance protein compare
Psyr_4420 -1.7 -4.4 precorrin-6A reductase compare
Psyr_1585 -1.7 -7.4 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal compare
Psyr_4686 -1.7 -4.3 8-amino-7-oxononanoate synthase compare
Psyr_0286 -1.7 -5.6 conserved hypothetical protein compare
Psyr_4754 -1.7 -2.7 16S rRNA m(2)G-966 methyltransferase compare
Psyr_2137 -1.7 -3.0 molybdopterin molybdochelatase compare
Psyr_4367 -1.6 -2.8 Iojap-related protein compare
Psyr_2143 -1.6 -2.6 delta1-piperideine 2-carboxylate reductase compare
Psyr_0919 -1.6 -10.0 Chromosome segregation ATPase-like protein compare
Psyr_0915 -1.6 -9.3 NAD-dependent epimerase/dehydratase compare
Psyr_2405 -1.6 -6.3 transcriptional regulator, GntR family compare
Psyr_4362 -1.6 -3.2 Rare lipoprotein A compare
Psyr_3014 -1.6 -2.6 protoporphyrin IX magnesium-chelatase compare
Psyr_4019 -1.6 -4.1 H-NS family protein MvaT compare
Psyr_0173 -1.6 -7.0 SSU ribosomal protein S6P modification protein compare
Psyr_0385 -1.6 -2.9 phosphoribosyl-ATP pyrophosphatase compare
Psyr_0936 -1.6 -9.0 Glycosyl transferase, group 1 compare
Psyr_4416 -1.5 -3.7 precorrin-8X methylmutase compare
Psyr_3867 -1.5 -2.8 hypothetical protein compare
Psyr_2808 -1.5 -2.6 hypothetical protein compare
Psyr_3677 -1.5 -2.6 Aminotransferase, class I and II compare
Psyr_4687 -1.5 -4.8 biotin synthase compare
Psyr_3636 -1.5 -9.1 Polysaccharide biosynthesis protein CapD compare
Psyr_2327 -1.5 -2.7 GTP cyclohydrolase subunit MoaA compare
Psyr_3566 -1.5 -3.6 transcriptional regulator, AraC family compare
Psyr_4159 -1.5 -6.8 RNAse G compare
Psyr_0914 -1.5 -8.9 Glycosyl transferase, group 1 compare
Psyr_0947 -1.5 -6.2 TPR repeat protein:TPR repeat protein compare
Psyr_3183 -1.5 -5.0 ATP-dependent Clp protease ATP-binding subunit ClpA compare
Psyr_2095 -1.5 -5.0 Conserved TM helix compare
Psyr_3026 -1.5 -3.6 transcriptional regulator, TetR family compare
Psyr_0916 -1.5 -8.2 GDP-mannose 4,6-dehydratase compare
Psyr_1941 -1.5 -1.4 ATP-binding region, ATPase-like:Histidine kinase compare
Psyr_1968 -1.4 -2.7 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_4512 -1.4 -5.3 putative phage-related protein compare
Psyr_3676 -1.4 -2.9 adenosylcobyric acid synthase (glutamine-hydrolysing) compare
Psyr_5034 -1.4 -7.2 CBS:Protein of unknown function DUF21:Transporter-associated region compare
Psyr_0459 -1.4 -7.7 5,10-methylenetetrahydrofolate reductase compare
Psyr_4088 -1.4 -4.7 ketopantoate reductase compare
Psyr_0579 -1.4 -8.1 RNAse R compare
Psyr_2484 -1.4 -7.7 Acriflavin resistance protein compare
Psyr_0648 -1.4 -5.3 transporter, putative compare
Psyr_0533 -1.4 -4.0 conserved hypothetical protein compare
Psyr_3107 -1.4 -3.3 conserved hypothetical protein compare
Psyr_4075 -1.4 -3.4 Short-chain dehydrogenase/reductase SDR compare
Psyr_1757 -1.4 -6.9 Binding-protein-dependent transport systems inner membrane component compare
Psyr_3675 -1.3 -2.2 adenosylcobinamide kinase compare
Psyr_0575 -1.3 -2.1 protease FtsH subunit HflC compare
Psyr_1251 -1.3 -3.7 quinoprotein compare
Psyr_1987 -1.3 -2.6 2-keto-3-deoxygalactonate kinase compare
Psyr_1108 -1.3 -7.6 glyceraldehyde-3-phosphate dehydrogenase compare
Psyr_3637 -1.3 -7.9 Glycosyl transferase, family 4 compare
Psyr_1408 -1.3 -2.3 Holliday junction endonuclease RuvC compare
Psyr_0920 -1.3 -10.3 Glycosyl transferase, group 1 compare
Psyr_1948 -1.3 -2.9 ABC transporter, periplasmic substrate-binding protein, putative compare
Psyr_0377 -1.3 -5.9 Periplasmic glucan biosynthesis protein, MdoG compare
Psyr_4194 -1.3 -4.1 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal compare
Psyr_1949 -1.3 -3.3 ABC-3 compare
Psyr_0212 -1.3 -2.6 Conserved hypothetical protein 255 compare
Psyr_1542 -1.3 -6.4 quinolinate synthetase compare
Psyr_1530 -1.3 -3.0 hypothetical protein compare
Psyr_1937 -1.3 -2.6 UspA compare
Psyr_2757 -1.3 -2.4 Binding-protein-dependent transport systems inner membrane component compare
Psyr_0519 -1.3 -5.1 Glutamate-ammonia-ligase adenylyltransferase compare


Specific Phenotypes

For 43 genes in this experiment

For carbon source 4-hydroxybutyric acid in Pseudomonas syringae pv. syringae B728a

For carbon source 4-hydroxybutyric acid across organisms