Experiment set7IT002 for Methanococcus maripaludis S2

Compare to:

H2 N-free with 10mM D-Glucuronamide

200 most important genes:

  gene name fitness t score description  
MMP_RS08720 -5.4 -2.5 4Fe-4S binding protein compare
MMP_RS07345 -5.0 -12.4 glycine synthesis protein GlyXL (from data) compare
MMP_RS05500 -4.4 -13.6 2-isopropylmalate synthase compare
MMP_RS07630 -4.1 -2.8 ATP-binding cassette domain-containing protein compare
MMP_RS07730 -3.9 -3.2 pyruvate synthase subunit beta compare
MMP_RS03015 -3.9 -21.1 GTP 3' 8-cyclase MoaA compare
MMP_RS01455 -3.9 -9.8 nickel pincer cofactor biosynthesis protein LarC compare
MMP_RS05515 -3.8 -9.7 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS04605 -3.8 -7.6 cobalt ECF transporter T component CbiQ compare
MMP_RS01005 -3.8 -2.4 riboflavin synthase compare
MMP_RS03315 -3.8 -2.3 ferrous iron transport protein A compare
MMP_RS08165 -3.7 -4.8 phosphoglycerate dehydrogenase compare
MMP_RS01020 -3.7 -1.9 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS07185 -3.7 -19.3 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS06355 -3.7 -6.1 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS04615 -3.7 -6.9 PDGLE domain-containing protein compare
MMP_RS06375 -3.7 -8.7 ATP-dependent sacrificial sulfur transferase LarE compare
MMP_RS03450 -3.6 -3.5 glycine synthesis protein GlyXS (from data) compare
MMP_RS08300 -3.6 -1.9 metal-sulfur cluster assembly factor compare
MMP_RS07635 -3.4 -10.4 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS03035 -3.3 -5.7 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS05930 -3.3 -4.1 3-isopropylmalate dehydratase large subunit compare
MMP_RS04215 -3.3 -11.0 nickel pincer cofactor biosynthesis protein LarB compare
MMP_RS01175 -3.3 -7.4 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS06350 -3.3 -11.4 HesA/MoeB/ThiF family protein compare
MMP_RS04710 -3.3 -3.7 hypothetical protein compare
MMP_RS07955 -3.2 -8.5 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS06285 -3.2 -5.3 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS04620 -3.2 -14.6 cobalt transporter CbiM compare
MMP_RS02010 -3.2 -16.5 PHP domain-containing protein compare
MMP_RS07390 -3.1 -4.5 cell division protein FtsZ compare
MMP_RS06475 -3.1 -8.1 FAD-dependent oxidoreductase compare
MMP_RS08210 -3.1 -4.3 phosphatidylglycerophosphatase A compare
MMP_RS03435 -3.0 -2.9 ketol-acid reductoisomerase compare
MMP_RS05555 -3.0 -2.8 DUF4040 domain-containing protein compare
MMP_RS09020 -2.9 -3.2 hypothetical protein compare
MMP_RS02240 -2.9 -6.8 methanogenesis marker 7 protein compare
MMP_RS06270 -2.9 -7.0 TIGR00300 family protein compare
MMP_RS08790 -2.8 -3.7 translation initiation factor IF-2 subunit alpha compare
MMP_RS02145 -2.8 -10.9 winged helix-turn-helix transcriptional regulator compare
MMP_RS04790 -2.8 -17.5 4-hydroxy-tetrahydrodipicolinate reductase compare
MMP_RS06975 -2.8 -3.8 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS03390 -2.8 -10.1 malate dehydrogenase compare
MMP_RS00750 -2.7 -3.3 fumarate hydratase compare
MMP_RS03700 -2.7 -11.5 sodium:proton antiporter compare
MMP_RS01610 -2.7 -7.2 hypothetical protein compare
MMP_RS06120 -2.7 -3.8 UPF0147 family protein compare
MMP_RS05550 -2.7 -1.3 cation:proton antiporter compare
MMP_RS08715 -2.7 -2.5 formylmethanofuran dehydrogenase subunit B compare
MMP_RS07735 -2.7 -1.6 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS01380 -2.6 -6.6 PHP domain-containing protein compare
MMP_RS04500 -2.6 -18.5 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS03445 -2.6 -1.7 methanogenesis marker 17 protein compare
MMP_RS01265 -2.6 -4.4 hypothetical protein compare
MMP_RS04685 -2.6 -4.1 DUF126 domain-containing protein compare
MMP_RS01385 -2.6 -1.1 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS08435 -2.5 -3.6 Era-like GTP-binding protein compare
MMP_RS07845 -2.5 -3.5 LL-diaminopimelate aminotransferase compare
MMP_RS08745 -2.5 -9.0 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS07755 -2.5 -2.2 DUF555 domain-containing protein compare
MMP_RS00305 -2.5 -3.3 phosphoribosyl-ATP diphosphatase compare
MMP_RS05425 -2.5 -6.6 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS00040 -2.5 -5.4 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS07355 -2.4 -1.6 transcription factor S compare
MMP_RS07005 -2.4 -1.0 4Fe-4S binding protein compare
MMP_RS00110 -2.4 -4.1 hypothetical protein compare
MMP_RS08330 -2.4 -8.6 NADH-quinone oxidoreductase subunit H compare
MMP_RS02195 -2.3 -6.0 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS02345 -2.3 -5.0 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS01225 -2.3 -7.4 DUF5379 domain-containing protein compare
MMP_RS06370 -2.3 -4.8 biotin synthase BioB compare
MMP_RS06885 -2.2 -3.7 50S ribosome-binding GTPase compare
MMP_RS06730 -2.2 -2.9 phosphopantothenate/pantothenate synthetase compare
MMP_RS01795 -2.2 -2.9 methanogenesis marker 6 protein compare
MMP_RS08635 -2.1 -3.3 UbiA family prenyltransferase compare
MMP_RS03475 -2.1 -1.3 hypothetical protein compare
MMP_RS08095 -2.1 -8.5 dethiobiotin synthase compare
MMP_RS03250 -2.1 -6.3 MJ1244 family protein compare
MMP_RS02135 -2.1 -7.0 DUF5612 domain-containing protein compare
MMP_RS08105 -2.1 -7.2 6-carboxyhexanoate--CoA ligase compare
MMP_RS05265 -2.1 -3.8 2-isopropylmalate synthase compare
MMP_RS03025 -2.1 -6.6 molybdenum cofactor guanylyltransferase compare
MMP_RS01500 -2.0 -4.3 CBS domain-containing protein compare
MMP_RS07075 -2.0 -6.2 phosphomannomutase/phosphoglucomutase compare
MMP_RS07420 -2.0 -6.5 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS07435 -2.0 -2.5 GMP synthase subunit A compare
MMP_RS00300 -2.0 -1.0 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS07380 -2.0 -2.7 transcription elongation factor Spt5 compare
MMP_RS06295 -2.0 -8.6 methanogenesis marker 14 protein compare
MMP_RS01755 -2.0 -2.4 DUF2097 domain-containing protein compare
MMP_RS05925 -2.0 -4.0 small nuclear ribonucleoprotein compare
MMP_RS01725 -2.0 -6.1 class I SAM-dependent methyltransferase family protein compare
MMP_RS03400 -1.9 -4.0 archease compare
MMP_RS01665 -1.9 -7.2 DUF2111 domain-containing protein compare
MMP_RS02245 -1.9 -4.6 hypothetical protein compare
MMP_RS03600 -1.9 -2.4 triose-phosphate isomerase compare
MMP_RS08100 -1.9 -8.3 8-amino-7-oxononanoate synthase compare
MMP_RS07600 -1.9 -4.2 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS01800 -1.9 -3.9 TIGR00303 family protein compare
MMP_RS01220 -1.9 -8.6 hypothetical protein compare
MMP_RS07710 -1.9 -9.2 cell division protein FtsZ compare
MMP_RS04900 -1.8 -14.6 hypothetical protein compare
MMP_RS08440 -1.8 -3.8 cell division protein SepF compare
MMP_RS01545 -1.8 -1.6 CBS domain-containing protein compare
MMP_RS06625 -1.8 -2.6 DNA primase compare
MMP_RS03580 -1.8 -4.3 signal recognition particle-docking protein FtsY compare
MMP_RS03640 -1.8 -4.2 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS04090 -1.7 -3.5 hypothetical protein compare
MMP_RS05280 -1.7 -8.2 COG1361 S-layer family protein compare
MMP_RS06020 -1.7 -6.4 archaeoflavoprotein AfpA compare
MMP_RS01700 -1.7 -1.1 dihydroxy-acid dehydratase compare
MMP_RS05250 -1.7 -2.7 NFYB/HAP3 family transcription factor subunit compare
MMP_RS05540 -1.7 -3.6 hypothetical protein compare
MMP_RS01975 -1.7 -12.9 hypothetical protein compare
MMP_RS06895 -1.7 -2.2 selenocysteine-specific translation elongation factor compare
MMP_RS03960 -1.7 -1.5 hypothetical protein compare
MMP_RS02800 -1.7 -8.3 nucleotidyltransferase domain-containing protein compare
MMP_RS06230 -1.7 -3.4 helix-turn-helix domain-containing protein compare
MMP_RS04780 -1.6 -3.1 ribonuclease P compare
MMP_RS01830 -1.6 -1.6 tRNA-Val compare
MMP_RS01875 -1.6 -10.1 N-acetyltransferase compare
MMP_RS07645 -1.6 -6.5 aldehyde dehydrogenase family protein compare
MMP_RS04890 -1.6 -1.4 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS07200 -1.6 -6.2 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS00895 -1.6 -5.1 hypothetical protein compare
MMP_RS07365 -1.6 -9.8 2-phosphoglycerate kinase compare
MMP_RS06925 -1.6 -3.4 ribonuclease VapC4 compare
MMP_RS01885 -1.6 -8.1 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS00695 -1.5 -1.3 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS02355 -1.5 -3.6 30S ribosomal protein S27ae compare
MMP_RS00685 -1.5 -4.5 2-phospho-L-lactate guanylyltransferase compare
MMP_RS08500 -1.5 -7.1 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMP_RS07605 -1.5 -4.0 diadenylate cyclase compare
MMP_RS08760 -1.5 -1.9 hypothetical protein compare
MMP_RS06840 -1.5 -1.3 DNA-directed RNA polymerase subunit N compare
MMP_RS07705 -1.5 -8.1 transcriptional regulator compare
MMP_RS07555 -1.5 -0.8 monovalent cation/H+ antiporter subunit E compare
MMP_RS07540 -1.5 -3.4 CBS domain-containing protein compare
MMP_RS01900 -1.5 -10.6 hypothetical protein compare
MMP_RS04585 -1.5 -8.3 AIR synthase related protein compare
MMP_RS04775 -1.5 -4.1 adenosylhomocysteinase compare
MMP_RS08650 -1.4 -2.9 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS00985 -1.4 -5.1 CDC48 family AAA ATPase compare
MMP_RS05430 -1.4 -5.2 TIGR00288 family NYN domain-containing protein compare
MMP_RS06940 -1.4 -2.7 polyprenyl diphosphate synthase compare
MMP_RS06400 -1.4 -1.9 4Fe-4S binding protein compare
MMP_RS07580 -1.4 -3.5 DUF356 domain-containing protein compare
MMP_RS01325 -1.4 -2.4 dihydroneopterin aldolase family protein compare
MMP_RS06670 -1.4 -4.8 glucose-6-phosphate isomerase compare
MMP_RS05845 -1.4 -2.0 tRNA-intron lyase compare
MMP_RS07545 -1.4 -1.3 HTH domain-containing protein compare
MMP_RS05640 -1.3 -6.7 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS06725 -1.3 -9.2 hypothetical protein compare
MMP_RS02885 -1.3 -8.1 molybdopterin biosynthesis protein compare
MMP_RS04955 -1.3 -5.8 DNA topoisomerase I compare
MMP_RS03140 -1.3 -8.5 hypothetical protein compare
MMP_RS07195 -1.3 -7.1 M20 family metallo-hydrolase compare
MMP_RS07090 -1.3 -6.4 tRNA (adenine-N1)-methyltransferase compare
MMP_RS05285 -1.3 -7.6 MMPL family transporter compare
MMP_RS03110 -1.3 -5.3 glycosyltransferase family 2 protein compare
MMP_RS00915 -1.3 -5.9 DUF116 domain-containing protein compare
MMP_RS07575 -1.3 -2.2 RNA ligase partner protein compare
MMP_RS05345 -1.3 -6.3 hypothetical protein compare
MMP_RS03385 -1.3 -1.4 cation diffusion facilitator family transporter compare
MMP_RS07750 -1.3 -3.8 DUF357 domain-containing protein compare
MMP_RS01955 -1.3 -3.1 hypothetical protein compare
MMP_RS06340 -1.3 -6.1 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS06105 -1.3 -5.8 hydrogenase maturation peptidase HycI compare
MMP_RS08460 -1.3 -2.4 proteasome-activating nucleotidase compare
MMP_RS06630 -1.2 -1.0 UPF0058 family protein compare
MMP_RS01925 -1.2 -6.6 DUF1616 domain-containing protein compare
MMP_RS08320 -1.2 -4.7 molybdopterin molybdotransferase MoeA compare
MMP_RS05460 -1.2 -8.2 YcaO-related McrA-glycine thioamidation protein compare
MMP_RS03145 -1.2 -6.8 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase compare
MMP_RS04785 -1.2 -7.3 hypothetical protein compare
MMP_RS08195 -1.2 -6.8 hypothetical protein compare
MMP_RS00675 -1.2 -1.3 nitroreductase family protein compare
MMP_RS07525 -1.2 -5.7 4Fe-4S binding protein compare
MMP_RS02235 -1.2 -6.9 CBS domain-containing protein compare
MMP_RS06395 -1.2 -2.8 ThiF family adenylyltransferase compare
MMP_RS02875 -1.2 -5.7 chorismate pyruvate-lyase family protein compare
MMP_RS01880 -1.2 -4.4 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS04870 -1.1 -4.8 TIGR02253 family HAD-type hydrolase compare
MMP_RS00720 -1.1 -5.6 metal-dependent hydrolase compare
MMP_RS01960 -1.1 -0.7 hypothetical protein compare
MMP_RS05440 -1.1 -8.2 winged helix-turn-helix transcriptional regulator compare
MMP_RS04485 -1.1 -8.3 putative beta-lysine N-acetyltransferase compare
MMP_RS03485 -1.1 -3.8 TIGR00267 family protein compare
MMP_RS04720 -1.1 -2.3 DedA family protein compare
MMP_RS01905 -1.1 -7.0 glycosyltransferase compare
MMP_RS05245 -1.1 -5.8 archaeosine biosynthesis radical SAM protein RaSEA compare
MMP_RS08785 -1.1 -1.0 RNA-protein complex protein Nop10 compare
MMP_RS07695 -1.1 -4.8 DUF3236 domain-containing protein compare
MMP_RS02930 -1.1 -2.8 class I SAM-dependent methyltransferase compare
MMP_RS02340 -1.1 -1.5 DNA-directed RNA polymerase subunit E'' compare
MMP_RS04875 -1.0 -4.6 energy-converting hydrogenase B subunit P compare
MMP_RS00810 -1.0 -4.5 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS08365 -1.0 -4.3 energy conserving hydrogenase EhbF compare
MMP_RS01970 -1.0 -7.4 TIGR04279 domain-containing protein compare
MMP_RS03440 -1.0 -1.3 MoaD/ThiS family protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in nitrogen source experiments

For nitrogen source Glucuronamide across organisms