Experiment set7IT001 for Klebsiella michiganensis M5al

Compare to:

LB with Paraquat dichloride 0.1 mg/ml

200 most important genes:

  gene name fitness t score description  
BWI76_RS01210 -3.8 -2.7 tyrosine recombinase XerC compare
BWI76_RS26085 -3.5 -2.4 3-dehydroquinate synthase compare
BWI76_RS09645 -3.3 -1.4 thioredoxin-disulfide reductase compare
BWI76_RS19770 -3.0 -1.7 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS26455 -2.9 -3.5 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS12985 -2.9 -1.8 transcriptional regulator compare
BWI76_RS16315 -2.8 -1.6 SirA-like protein compare
BWI76_RS00025 -2.7 -1.1 hypothetical protein compare
BWI76_RS00240 -2.5 -1.7 FMN-binding protein MioC compare
BWI76_RS26075 -2.4 -2.9 DNA adenine methylase compare
BWI76_RS07705 -2.4 -2.0 enterochelin esterase compare
BWI76_RS26410 -2.4 -1.4 membrane protein compare
BWI76_RS16965 -2.4 -3.5 murein lipoprotein compare
BWI76_RS23915 -2.4 -2.0 5-formyltetrahydrofolate cyclo-ligase compare
BWI76_RS11395 -2.3 -3.2 RNA polymerase sigma factor FecI compare
BWI76_RS01995 -2.3 -1.4 AraC family transcriptional regulator compare
BWI76_RS13545 -2.2 -1.3 N-acetyltransferase compare
BWI76_RS23530 -2.2 -3.3 MarR family transcriptional regulator compare
BWI76_RS08750 -2.2 -1.3 kinase inhibitor compare
BWI76_RS26460 -2.1 -3.7 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS21690 -2.1 -1.0 hypothetical protein compare
BWI76_RS08535 -2.0 -2.0 translocation protein TolB compare
BWI76_RS01385 -2.0 -1.4 potassium transporter compare
BWI76_RS06535 -2.0 -3.8 endopeptidase La compare
BWI76_RS09660 -2.0 -1.4 DNA translocase FtsK compare
BWI76_RS21100 -1.9 -1.7 nucleoside-diphosphate kinase compare
BWI76_RS07475 -1.9 -1.1 DNA-binding transcriptional regulator RamA compare
BWI76_RS14410 -1.9 -1.3 hypothetical protein compare
BWI76_RS16140 -1.9 -1.7 3-oxoadipate CoA-transferase compare
BWI76_RS15920 -1.8 -1.4 hypothetical protein compare
BWI76_RS02545 -1.8 -5.7 protease modulator HflK compare
BWI76_RS23885 -1.8 -1.5 2-octaprenylphenol hydroxylase compare
BWI76_RS01200 -1.8 -1.2 diaminopimelate epimerase compare
BWI76_RS01650 -1.8 -2.9 acetyltransferase compare
BWI76_RS17205 -1.7 -6.0 cardiolipin synthase A compare
BWI76_RS23360 -1.7 -2.1 diaminopimelate decarboxylase compare
BWI76_RS17070 -1.7 -3.1 phosphoenolpyruvate synthase regulatory protein compare
BWI76_RS11155 -1.7 -2.0 penicillin-binding protein activator LpoB compare
BWI76_RS21310 -1.7 -1.0 DNA repair protein RecO compare
BWI76_RS21165 -1.7 -1.4 Fe-S cluster assembly transcriptional regulator IscR compare
BWI76_RS00710 -1.7 -1.7 6-N-hydroxylaminopurine resistance protein compare
BWI76_RS16200 -1.6 -1.9 NAD(P) transhydrogenase subunit beta compare
BWI76_RS08530 -1.6 -1.5 protein TolA compare
BWI76_RS12375 -1.6 -1.9 DNA-invertase hin compare
BWI76_RS20380 -1.6 -1.2 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS18140 -1.6 -3.3 zinc ABC transporter permease compare
BWI76_RS22205 -1.5 -2.3 cation ABC transporter ATP-binding protein compare
BWI76_RS25285 -1.5 -0.9 HPr family phosphocarrier protein compare
BWI76_RS21140 -1.5 -1.8 molecular chaperone HscA compare
BWI76_RS26390 -1.5 -2.2 cell division protein FtsX compare
BWI76_RS17000 -1.5 -3.6 Fe-S cluster assembly scaffold SufA compare
BWI76_RS18870 -1.5 -1.1 protein NifZ compare
BWI76_RS26395 -1.5 -3.4 cell division protein FtsE compare
BWI76_RS00750 -1.5 -2.8 ATP-dependent protease ATP-binding subunit HslU compare
BWI76_RS02870 -1.5 -2.4 hypothetical protein compare
BWI76_RS00180 -1.5 -1.1 F0F1 ATP synthase subunit epsilon compare
BWI76_RS01330 -1.5 -2.6 twin-arginine translocase subunit TatC compare
BWI76_RS17400 -1.4 -1.1 transporter compare
BWI76_RS20375 -1.4 -0.8 membrane protein compare
BWI76_RS21370 -1.4 -1.5 ATP-dependent RNA helicase SrmB compare
BWI76_RS18130 -1.4 -1.9 zinc ABC transporter substrate-binding protein compare
BWI76_RS14820 -1.4 -1.5 LysR family transcriptional regulator compare
BWI76_RS22410 -1.4 -2.8 PTS lactose/cellobiose transporter subunit IIA compare
BWI76_RS12745 -1.4 -1.9 putative prophage membrane protein compare
BWI76_RS14650 -1.4 -2.1 helix-turn-helix transcriptional regulator compare
BWI76_RS13950 -1.4 -3.3 hypothetical protein compare
BWI76_RS01325 -1.4 -1.6 twin-arginine translocase subunit TatB compare
BWI76_RS26045 -1.4 -1.9 nitrite reductase small subunit compare
BWI76_RS22845 -1.4 -4.4 flavodoxin compare
BWI76_RS11445 -1.4 -2.6 hypothetical protein compare
BWI76_RS04655 -1.4 -2.2 shikimate dehydrogenase compare
BWI76_RS04510 -1.3 -1.4 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS21445 -1.3 -2.4 hypothetical protein compare
BWI76_RS27505 -1.3 -3.0 septal ring assembly protein ZapB compare
BWI76_RS02000 -1.3 -5.5 transcriptional regulator compare
BWI76_RS26190 -1.3 -2.3 glycerol-3-phosphate dehydrogenase compare
BWI76_RS21460 -1.3 -1.1 translation inhibitor protein RaiA compare
BWI76_RS14980 -1.3 -1.1 hypothetical protein compare
BWI76_RS18745 -1.3 -1.9 adenosylhomocysteinase compare
BWI76_RS24595 -1.3 -4.5 dihydroxyacetone kinase subunit DhaK compare
BWI76_RS21980 -1.3 -1.2 hypothetical protein compare
BWI76_RS05425 -1.3 -3.0 EEP domain-containing protein compare
BWI76_RS06730 -1.3 -1.9 lac repressor compare
BWI76_RS01105 -1.3 -3.0 glucose-1-phosphate thymidylyltransferase compare
BWI76_RS17420 -1.3 -2.0 hypothetical protein compare
BWI76_RS22955 -1.3 -2.8 transcriptional regulator GcvA compare
BWI76_RS04175 -1.3 -2.0 energy-dependent translational throttle protein EttA compare
BWI76_RS19215 -1.2 -1.2 proline-specific peptidase compare
BWI76_RS05520 -1.2 -2.2 hypothetical protein compare
BWI76_RS25870 -1.2 -1.2 elongation factor Tu compare
BWI76_RS08395 -1.2 -1.4 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS04645 -1.2 -3.2 3-dehydroquinase compare
BWI76_RS04705 -1.2 -3.2 DNA-binding transcriptional regulator FruR compare
BWI76_RS09690 -1.2 -1.6 dimethyl sulfoxide reductase compare
BWI76_RS26185 -1.2 -1.5 thiosulfate sulfurtransferase compare
BWI76_RS19580 -1.2 -1.8 FAA-hydrolase compare
BWI76_RS18590 -1.2 -2.2 DNA-binding response regulator compare
BWI76_RS18295 -1.2 -4.7 tyrosine transporter TyrP compare
BWI76_RS12495 -1.2 -1.1 2-Cys peroxiredoxin compare
BWI76_RS27450 -1.2 -2.7 ferredoxin--NADP(+) reductase compare
BWI76_RS14825 -1.2 -1.9 dienelactone hydrolase family protein compare
BWI76_RS03560 -1.2 -2.4 propanediol utilization phosphotransacylase compare
BWI76_RS15695 -1.2 -1.6 hypothetical protein compare
BWI76_RS21095 -1.2 -3.6 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN compare
BWI76_RS13600 -1.2 -1.8 hypothetical protein compare
BWI76_RS22625 -1.2 -1.4 transcriptional regulator compare
BWI76_RS17280 -1.2 -2.4 patatin family protein compare
BWI76_RS03605 -1.2 -2.6 BMC domain-containing protein compare
BWI76_RS15835 -1.1 -1.0 hypothetical protein compare
BWI76_RS06080 -1.1 -1.1 taurine dioxygenase compare
BWI76_RS21505 -1.1 -0.8 hypothetical protein compare
BWI76_RS21130 -1.1 -1.1 Fe-S assembly protein IscX compare
BWI76_RS08825 -1.1 -2.3 cyclic pyranopterin monophosphate synthase MoaC compare
BWI76_RS21235 -1.1 -1.0 hypothetical protein compare
BWI76_RS15650 -1.1 -2.8 gp5 compare
BWI76_RS12895 -1.1 -1.5 hypothetical protein compare
BWI76_RS00760 -1.1 -3.7 cell division protein FtsN compare
BWI76_RS01135 -1.1 -2.4 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
BWI76_RS16030 -1.1 -1.1 malonate decarboxylase acyl carrier protein compare
BWI76_RS09970 -1.1 -2.8 porin OmpA compare
BWI76_RS24035 -1.1 -1.5 hypothetical protein compare
BWI76_RS15690 -1.1 -1.9 hypothetical protein compare
BWI76_RS26245 -1.1 -1.2 transcriptional regulator compare
BWI76_RS20085 -1.1 -2.5 GNAT family N-acetyltransferase compare
BWI76_RS20395 -1.1 -3.1 flagella biosynthesis regulator compare
BWI76_RS18305 -1.1 -2.1 dihydrodipicolinate synthase family protein compare
BWI76_RS19670 -1.1 -1.1 S-formylglutathione hydrolase compare
BWI76_RS03040 -1.1 -1.2 leucyl aminopeptidase compare
BWI76_RS23895 -1.1 -0.9 Xaa-Pro aminopeptidase compare
BWI76_RS08310 -1.1 -1.5 potassium-transporting ATPase subunit C compare
BWI76_RS15605 -1.1 -1.3 hypothetical protein compare
BWI76_RS15825 -1.1 -1.1 hypothetical protein compare
BWI76_RS18755 -1.1 -0.6 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
BWI76_RS25335 -1.0 -1.4 stringent starvation protein A compare
BWI76_RS26980 -1.0 -1.2 cold-shock protein compare
BWI76_RS11430 -1.0 -0.8 lipoprotein compare
BWI76_RS27280 -1.0 -3.8 polymerase compare
BWI76_RS15700 -1.0 -2.9 hypothetical protein compare
BWI76_RS01270 -1.0 -4.0 hypothetical protein compare
BWI76_RS20440 -1.0 -2.3 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS21410 -1.0 -2.3 lipoprotein compare
BWI76_RS19700 -1.0 -1.4 deoxyribonuclease IV compare
BWI76_RS10755 -1.0 -0.9 pyrimidine utilization flavin reductase protein F compare
BWI76_RS07070 -1.0 -2.7 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS13770 -1.0 -2.0 alkylhydroperoxidase domain protein compare
BWI76_RS11410 -1.0 -1.1 leucine efflux protein compare
BWI76_RS03015 -1.0 -1.8 RNase E inhibitor protein compare
BWI76_RS14460 -1.0 -2.3 MurR/RpiR family transcriptional regulator compare
BWI76_RS18165 -1.0 -0.9 NUDIX pyrophosphatase compare
BWI76_RS10825 -1.0 -2.9 deferrochelatase/peroxidase EfeB compare
BWI76_RS05445 -1.0 -2.3 type 11 methyltransferase compare
BWI76_RS11110 -1.0 -1.2 cell division protein YceG compare
BWI76_RS23970 -1.0 -1.2 mechanosensitive ion channel protein MscS compare
BWI76_RS06225 -1.0 -2.8 exonuclease sbcCD subunit D compare
BWI76_RS22620 -1.0 -1.9 3-octaprenyl-4-hydroxybenzoate carboxy-lyase compare
BWI76_RS22950 -1.0 -1.5 membrane protein compare
BWI76_RS18385 -1.0 -0.8 hypothetical protein compare
BWI76_RS16995 -1.0 -3.8 Fe-S cluster assembly protein SufB compare
BWI76_RS11985 -1.0 -2.0 hypothetical protein compare
BWI76_RS01110 -1.0 -2.7 TDP-fucosamine acetyltransferase compare
BWI76_RS23905 -1.0 -2.6 Z-ring-associated protein compare
BWI76_RS19730 -1.0 -2.8 1-phosphofructokinase compare
BWI76_RS01090 -1.0 -2.3 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
BWI76_RS24850 -1.0 -3.3 DeoR family transcriptional regulator compare
BWI76_RS18915 -1.0 -1.6 NAD(P)-dependent oxidoreductase compare
BWI76_RS18575 -1.0 -1.4 transcriptional regulator compare
BWI76_RS11880 -0.9 -3.3 23S rRNA pseudouridylate synthase B compare
BWI76_RS15685 -0.9 -1.1 hypothetical protein compare
BWI76_RS12665 -0.9 -1.4 hypothetical protein compare
BWI76_RS16525 -0.9 -2.0 cyclopropane-fatty-acyl-phospholipid synthase compare
BWI76_RS06075 -0.9 -1.5 taurine transporter subunit compare
BWI76_RS10680 -0.9 -1.7 tartrate dehydrogenase compare
BWI76_RS19900 -0.9 -1.7 FAD:protein FMN transferase compare
BWI76_RS18920 -0.9 -1.4 ATP phosphoribosyltransferase compare
BWI76_RS15830 -0.9 -2.3 hypothetical protein compare
BWI76_RS16235 -0.9 -1.2 membrane protein compare
BWI76_RS05120 -0.9 -4.6 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS18175 -0.9 -1.9 hydrolase compare
BWI76_RS19330 -0.9 -0.7 HAD family hydrolase compare
BWI76_RS16990 -0.9 -1.9 ABC transporter ATP-binding protein compare
BWI76_RS24600 -0.9 -1.9 dihydroxyacetone kinase compare
BWI76_RS19690 -0.9 -1.1 LysR family transcriptional regulator compare
BWI76_RS24110 -0.9 -1.0 YggU family protein compare
BWI76_RS18885 -0.9 -1.3 nitrogen fixation regulatory protein compare
BWI76_RS10740 -0.9 -1.8 NAD(P)H:quinone oxidoreductase compare
BWI76_RS21995 -0.9 -2.0 transcriptional regulator compare
BWI76_RS25910 -0.9 -1.9 peptidyl-prolyl cis-trans isomerase compare
BWI76_RS23120 -0.9 -1.1 propanediol dehydratase medium subunit compare
BWI76_RS10575 -0.9 -0.8 polar amino acid ABC transporter permease compare
BWI76_RS12545 -0.9 -1.7 hypothetical protein compare
BWI76_RS25300 -0.9 -1.0 hybrid sensor histidine kinase/response regulator compare
BWI76_RS12460 -0.9 -1.3 envelope stress response membrane protein PspC compare
BWI76_RS02690 -0.9 -1.3 hypothetical protein compare
BWI76_RS00765 -0.9 -3.0 DNA-binding transcriptional regulator CytR compare
BWI76_RS09860 -0.9 -1.6 hypothetical protein compare
BWI76_RS07455 -0.9 -2.2 NAD(P)H nitroreductase compare
BWI76_RS15740 -0.9 -1.8 HNH endonuclease compare
BWI76_RS17195 -0.9 -1.3 hypothetical protein compare
BWI76_RS09315 -0.9 -1.0 hypothetical protein compare
BWI76_RS05645 -0.9 -2.8 fructuronate reductase compare


Specific Phenotypes

For 17 genes in this experiment

For stress Paraquat dichloride in Klebsiella michiganensis M5al

For stress Paraquat dichloride across organisms