Experiment set7H13 for Pseudomonas stutzeri RCH2

Compare to:

RCH2 defined media with MreB Perturbing Compound A22 0.015 mg/ml

200 most important genes:

  gene name fitness t score description  
Psest_0508 -5.6 -5.4 gamma-glutamyl phosphate reductase compare
Psest_3298 -5.5 -7.6 histidinol dehydrogenase compare
Psest_2591 -5.4 -3.7 3-isopropylmalate dehydratase, large subunit compare
Psest_2584 -5.3 -7.2 Phosphoribosylanthranilate isomerase compare
Psest_3648 -5.2 -3.6 anthranilate phosphoribosyltransferase compare
Psest_0153 -5.1 -11.8 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit compare
Psest_0325 -5.0 -15.4 Putative threonine efflux protein compare
Psest_0326 -4.9 -14.2 Taurine catabolism dioxygenase TauD, TfdA family. compare
Psest_3866 -4.9 -14.1 threonine ammonia-lyase, biosynthetic, long form compare
Psest_3650 -4.8 -9.8 anthranilate synthase component I, non-proteobacterial lineages compare
Psest_2578 -4.8 -14.7 O-succinylhomoserine sulfhydrylase compare
Psest_3384 -4.8 -9.1 glutamate 5-kinase compare
Psest_3647 -4.7 -7.1 Indole-3-glycerol phosphate synthase compare
Psest_3864 -4.6 -12.3 Histidinol-phosphatase (EC:3.1.3.15) (from data) compare
Psest_0954 -4.6 -10.5 Fe-S oxidoreductase compare
Psest_2589 -4.5 -14.3 3-isopropylmalate dehydrogenase compare
Psest_2579 -4.5 -8.5 amidophosphoribosyltransferase compare
Psest_0155 -4.5 -5.3 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
Psest_3299 -4.4 -15.2 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
Psest_1037 -4.4 -4.3 acetolactate synthase, small subunit compare
Psest_3944 -4.4 -3.0 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
Psest_0952 -4.2 -5.0 Uncharacterized conserved protein compare
Psest_1295 -4.2 -8.6 Aspartate/tyrosine/aromatic aminotransferase compare
Psest_0953 -4.1 -12.6 iron-sulfur cluster-binding protein compare
Psest_0152 -4.1 -7.8 Imidazoleglycerol-phosphate dehydratase compare
Psest_3159 -4.0 -10.0 phosphoribosylformylglycinamidine synthase, single chain form compare
Psest_0687 -3.9 -9.0 ATP phosphoribosyltransferase, regulatory subunit compare
Psest_0280 -3.9 -14.7 homoserine O-acetyltransferase compare
Psest_0062 -3.9 -9.3 tryptophan synthase, alpha subunit compare
Psest_0063 -3.6 -6.9 tryptophan synthase, beta subunit compare
Psest_1452 -3.6 -10.1 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase compare
Psest_3810 -3.5 -2.4 orotate phosphoribosyltransferase compare
Psest_0489 -3.5 -2.4 phosphoserine phosphatase SerB compare
Psest_1013 -3.5 -4.1 phosphoribosylamine--glycine ligase compare
Psest_1474 -3.5 -5.7 phosphoribosylaminoimidazole synthetase compare
Psest_0718 -3.5 -5.2 nicotinate-nucleotide pyrophosphorylase compare
Psest_1509 -3.4 -10.7 quinolinate synthetase complex, A subunit compare
Psest_1473 -3.4 -11.3 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent compare
Psest_0279 -3.4 -7.1 methionine biosynthesis protein MetW compare
Psest_3123 -3.3 -5.8 dihydroorotase, homodimeric type compare
Psest_1772 -3.2 -7.0 Aspartate/tyrosine/aromatic aminotransferase compare
Psest_3649 -3.2 -9.6 glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase compare
Psest_4084 -3.1 -15.4 oxaloacetate decarboxylase alpha subunit compare
Psest_0411 -3.1 -11.3 biotin synthetase compare
Psest_0498 -3.0 -2.9 ribosome small subunit-dependent GTPase A compare
Psest_1947 -2.9 -2.0 dihydroorotate dehydrogenase, subfamily 2 compare
Psest_3943 -2.9 -2.8 Phosphoribosyl-AMP cyclohydrolase compare
Psest_3297 -2.8 -12.8 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) compare
Psest_4085 -2.7 -15.1 Biotin carboxylase compare
Psest_2590 -2.7 -2.5 3-isopropylmalate dehydratase, small subunit compare
Psest_3047 -2.7 -2.5 methionyl-tRNA synthetase/methionyl-tRNA synthetase C-terminal region/beta chain compare
Psest_1640 -2.4 -12.1 (p)ppGpp synthetase, RelA/SpoT family compare
Psest_3226 -2.4 -2.2 Predicted membrane protein compare
Psest_0313 -2.4 -3.6 5,10-methylenetetrahydrofolate reductase, prokaryotic form compare
Psest_0415 -2.3 -5.2 dethiobiotin synthase compare
Psest_4086 -2.3 -10.8 Transcriptional regulator compare
Psest_0414 -2.2 -4.3 biotin biosynthesis protein BioC compare
Psest_0412 -2.1 -10.5 8-amino-7-oxononanoate synthase compare
Psest_3818 -2.1 -6.6 endoribonuclease L-PSP, putative compare
Psest_3296 -2.0 -4.3 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain compare
Psest_0094 -2.0 -1.8 Uncharacterized enzyme of phosphonate metabolism compare
Psest_2945 -1.8 -2.7 septum site-determining protein MinC compare
Psest_3496 -1.8 -1.9 Predicted metal-binding protein compare
Psest_2329 -1.8 -13.4 Transcriptional regulator compare
Psest_0306 -1.8 -11.8 adenosylmethionine-8-amino-7-oxononanoate transaminase compare
Psest_0955 -1.8 -4.8 D,L-lactate:H+ symporter (from data) compare
Psest_4099 -1.8 -9.9 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component compare
Psest_3697 -1.8 -1.7 Outer membrane lipoprotein carrier protein LolA. compare
Psest_0515 -1.7 -5.1 rare lipoprotein A compare
Psest_3458 -1.7 -1.2 hypothetical protein compare
Psest_2088 -1.7 -2.4 Uncharacterized protein conserved in bacteria compare
Psest_3092 -1.7 -2.5 ribonuclease III, bacterial compare
Psest_4098 -1.7 -2.5 Superfamily I DNA and RNA helicases compare
Psest_2907 -1.7 -2.4 Protein of unknown function (DUF3618). compare
Psest_2864 -1.6 -5.7 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Psest_0951 -1.6 -9.0 FAD/FMN-containing dehydrogenases compare
Psest_0413 -1.6 -6.2 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) compare
Psest_2643 -1.6 -1.5 Beta-glucosidase-related glycosidases compare
Psest_1643 -1.6 -1.8 hypothetical protein compare
Psest_0442 -1.6 -5.9 ATPases of the AAA+ class compare
Psest_2646 -1.6 -3.9 SOS regulatory protein LexA compare
Psest_0719 -1.6 -5.9 Uncharacterized protein conserved in bacteria compare
Psest_2719 -1.6 -4.6 acetylornithine and succinylornithine aminotransferases/succinylornithine transaminase family compare
Psest_3700 -1.5 -0.7 hypothetical protein compare
Psest_0537 -1.5 -1.7 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase compare
Psest_3565 -1.5 -1.5 hypothetical protein compare
Psest_1056 -1.5 -2.4 2-isopropylmalate synthase, bacterial type compare
Psest_2358 -1.5 -2.1 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) compare
Psest_0327 -1.5 -3.2 Transcriptional regulator compare
Psest_2360 -1.5 -2.9 Uncharacterized protein, putative amidase compare
Psest_3910 -1.5 -1.5 Uncharacterized protein conserved in bacteria compare
Psest_1012 -1.5 -5.2 Signal transduction histidine kinase compare
Psest_3554 -1.4 -1.9 Uncharacterized protein conserved in bacteria compare
Psest_2946 -1.4 -5.1 septum site-determining protein MinD compare
Psest_0379 -1.4 -3.1 Galactose mutarotase and related enzymes compare
Psest_0401 -1.4 -0.9 isopentenyl-diphosphate delta-isomerase, type 2 compare
Psest_3749 -1.4 -9.0 Response regulator of the LytR/AlgR family compare
Psest_3878 -1.4 -2.5 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Psest_4100 -1.4 -2.2 Uncharacterized protein conserved in bacteria compare
Psest_0267 -1.3 -8.1 Uncharacterized enzyme of thiazole biosynthesis compare
Psest_3456 -1.3 -1.4 RNA polymerase sigma factor, sigma-70 family compare
Psest_3323 -1.3 -4.4 ribonuclease, Rne/Rng family compare
Psest_2316 -1.3 -9.3 phosphoenolpyruvate synthase compare
Psest_2531 -1.3 -8.9 cytochrome c oxidase accessory protein FixG compare
Psest_3100 -1.3 -7.9 RNA polymerase sigma factor RpoE compare
Psest_0536 -1.3 -3.0 thiamine-phosphate pyrophosphorylase compare
Psest_2413 -1.3 -1.8 Periplasmic protein TonB, links inner and outer membranes compare
Psest_4310 -1.3 -1.4 ABC-type Mn2+/Zn2+ transport systems, permease components compare
Psest_2104 -1.3 -3.0 IscR-regulated protein YhgI compare
Psest_1031 -1.3 -6.3 Uncharacterized protein conserved in bacteria compare
Psest_3732 -1.2 -6.6 polyphosphate kinase 1 compare
Psest_0855 -1.2 -3.0 NAD-dependent aldehyde dehydrogenases compare
Psest_3937 -1.2 -1.4 ATP-dependent protease HslVU, ATPase subunit compare
Psest_3701 -1.2 -1.9 3-oxoacyl-(acyl-carrier-protein) synthase compare
Psest_0359 -1.2 -2.3 Transcriptional regulators compare
Psest_3881 -1.2 -1.2 hypothetical protein compare
Psest_4256 -1.2 -1.7 ABC-type transport system involved in resistance to organic solvents, ATPase component compare
Psest_3664 -1.2 -1.3 Predicted phosphotransferase related to Ser/Thr protein kinases compare
Psest_0212 -1.2 -1.1 exodeoxyribonuclease V, gamma subunit compare
Psest_0853 -1.2 -2.4 6-phosphogluconolactonase compare
Psest_4243 -1.2 -1.1 type VI secretion lipoprotein, VC_A0113 family compare
Psest_1115 -1.1 -3.2 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 compare
Psest_1054 -1.1 -5.0 Diaminopimelate decarboxylase compare
Psest_1070 -1.1 -1.9 Predicted membrane protein compare
Psest_0266 -1.1 -5.1 thiamine biosynthesis protein ThiS compare
Psest_3377 -1.1 -1.5 FKBP-type peptidyl-prolyl cis-trans isomerases 2 compare
Psest_3823 -1.1 -2.4 hypothetical protein compare
Psest_0722 -1.1 -5.0 Predicted ATPase compare
Psest_0999 -1.1 -2.4 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Psest_2265 -1.1 -3.9 Outer membrane protein compare
Psest_4219 -1.1 -1.9 DNA polymerase I compare
Psest_1144 -1.0 -1.9 AmpG-related permease compare
Psest_0225 -1.0 -1.2 Predicted permease, DMT superfamily compare
Psest_0260 -1.0 -1.8 Cell division protein compare
Psest_1292 -1.0 -5.8 monothiol glutaredoxin, Grx4 family compare
Psest_0845 -1.0 -0.9 hypothetical protein compare
Psest_2714 -1.0 -2.1 7-cyano-7-deazaguanine reductase compare
Psest_3908 -1.0 -1.0 Cytochrome c553 compare
Psest_3899 -1.0 -2.3 Predicted phosphoribosyltransferases compare
Psest_2123 -1.0 -1.6 fusion of gluconokinase (EC 2.7.1.12) and the small permease component of the D-gluconate TRAP transporter (from data) compare
Psest_0362 -1.0 -2.5 TRAP-type C4-dicarboxylate transport system, small permease component compare
Psest_1496 -1.0 -1.3 Holliday junction DNA helicase, RuvA subunit compare
Psest_4145 -1.0 -1.7 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) compare
Psest_1511 -1.0 -4.2 Predicted redox protein, regulator of disulfide bond formation compare
Psest_3395 -1.0 -1.5 hypothetical protein compare
Psest_0533 -1.0 -3.4 Sel1 repeat. compare
Psest_1804 -1.0 -2.0 Superfamily II DNA and RNA helicases compare
Psest_2645 -1.0 -5.2 Transcriptional regulator compare
Psest_1527 -1.0 -7.2 Na+/proline symporter compare
Psest_0744 -1.0 -1.0 Uncharacterized conserved protein compare
Psest_3474 -0.9 -2.1 Short-chain dehydrogenases of various substrate specificities compare
Psest_0858 -0.9 -3.6 Maltose operon periplasmic protein precursor (MalM). compare
Psest_3013 -0.9 -1.4 cobyrinic acid a,c-diamide synthase compare
Psest_0573 -0.9 -2.6 cation diffusion facilitator family transporter compare
Psest_3555 -0.9 -2.1 Predicted methyltransferase compare
Psest_1686 -0.9 -3.7 fatty acid/phospholipid synthesis protein PlsX compare
Psest_0349 -0.9 -3.5 DNA polymerase III, alpha subunit (gram-positive type) compare
Psest_3351 -0.9 -3.6 peptide chain release factor 3 compare
Psest_3270 -0.9 -1.9 probable S-adenosylmethionine-dependent methyltransferase, YraL family compare
Psest_3477 -0.9 -1.9 Signal transduction histidine kinase compare
Psest_2407 -0.9 -2.0 nitrite reductase [NAD(P)H], small subunit compare
Psest_3960 -0.9 -1.4 3'(2'),5'-bisphosphate nucleotidase, bacterial compare
Psest_0360 -0.9 -3.0 Predicted permease, DMT superfamily compare
Psest_3894 -0.9 -2.3 Carbon starvation protein, predicted membrane protein compare
Psest_0842 -0.9 -1.6 anaerobic ribonucleoside-triphosphate reductase activating protein compare
Psest_3893 -0.9 -2.0 Multisubunit Na+/H+ antiporter, MnhE subunit compare
Psest_3904 -0.9 -0.6 hypothetical protein compare
Psest_0417 -0.9 -2.4 Acyl-CoA dehydrogenases compare
Psest_2632 -0.9 -3.7 ribosomal protein S12 methylthiotransferase RimO compare
Psest_4309 -0.9 -2.2 ABC-type Mn/Zn transport systems, ATPase component compare
Psest_3637 -0.9 -1.2 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases compare
Psest_2447 -0.9 -1.1 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) compare
Psest_4184 -0.9 -2.5 hypothetical protein compare
Psest_3692 -0.9 -1.8 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases compare
Psest_0346 -0.9 -2.2 small component of pyruvate/D-alanine transporter (TIGR03647) (from data) compare
Psest_0175 -0.9 -3.7 Xaa-Pro aminopeptidase compare
Psest_0188 -0.9 -2.8 diguanylate cyclase (GGDEF) domain compare
Psest_2122 -0.9 -1.1 Parvulin-like peptidyl-prolyl isomerase compare
Psest_0064 -0.9 -1.1 Transcriptional regulator compare
Psest_2285 -0.8 -2.8 ATP-dependent protease La compare
Psest_0661 -0.8 -3.4 PAS domain S-box compare
Psest_1073 -0.8 -2.4 TRAP-type mannitol/chloroaromatic compound transport system, small permease component compare
Psest_0852 -0.8 -2.7 glucose-6-phosphate 1-dehydrogenase compare
Psest_0477 -0.8 -5.4 thiamine biosynthesis protein ThiC compare
Psest_1650 -0.8 -4.6 hypothetical protein compare
Psest_0846 -0.8 -2.4 Uncharacterized protein probably involved in high-affinity Fe2+ transport compare
Psest_3840 -0.8 -2.6 D-lactate/glycolate dehydrogenase, FAD binding subunit GlcE (EC 1.1.99.6; EC 1.1.99.14) (from data) compare
Psest_0347 -0.8 -6.1 large component of pyruvate/D-alanine transporter (actP-like) (from data) compare
Psest_3832 -0.8 -1.1 hypothetical protein compare
Psest_0207 -0.8 -1.6 hypothetical protein compare
Psest_2622 -0.8 -1.6 TadE-like protein. compare
Psest_4186 -0.8 -2.3 Methylase of polypeptide chain release factors compare
Psest_3761 -0.8 -1.6 Transcription elongation factor compare
Psest_3338 -0.8 -1.2 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain compare
Psest_3005 -0.8 -1.8 Fructose-2,6-bisphosphatase compare
Psest_0779 -0.8 -1.9 tyrosine aminotransferase (EC 2.6.1.57) (from data) compare
Psest_0067 -0.8 -1.3 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain compare
Psest_0969 -0.8 -1.9 transcription elongation factor GreA compare
Psest_0390 -0.8 -1.5 Short-chain dehydrogenases of various substrate specificities compare
Psest_2988 -0.8 -3.9 aspartate kinase, monofunctional class compare


Specific Phenotypes

For 1 genes in this experiment

For stress MreB Perturbing Compound A22 in Pseudomonas stutzeri RCH2

For stress MreB Perturbing Compound A22 across organisms