Experiment set7H13 for Pseudomonas stutzeri RCH2

Compare to:

RCH2 defined media with MreB Perturbing Compound A22 0.015 mg/ml

200 most detrimental genes:

  gene name fitness t score description  
Psest_0097 +1.7 1.9 phosphonates metabolism transcriptional regulator PhnF compare
Psest_4201 +1.4 2.5 general secretion pathway protein F compare
Psest_3531 +1.4 2.4 Peptidase propeptide and YPEB domain. compare
Psest_0209 +1.3 1.7 membrane protein AbrB duplication compare
Psest_1805 +1.3 4.6 integration host factor, beta subunit compare
Psest_3478 +1.3 2.1 Cytochrome B561 compare
Psest_0316 +1.2 2.0 Cytochrome c556 compare
Psest_3546 +1.1 1.8 Phosphatidylglycerophosphatase A and related proteins compare
Psest_1366 +1.1 1.7 hypothetical protein compare
Psest_0309 +1.0 1.8 RND family efflux transporter, MFP subunit compare
Psest_3735 +1.0 1.4 uncharacterized domain 1 compare
Psest_4010 +1.0 1.3 peroxiredoxin, OsmC subfamily compare
Psest_4078 +1.0 3.5 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D compare
Psest_0872 +1.0 1.3 Helix-turn-helix. compare
Psest_4142 +1.0 1.1 hypothetical protein compare
Psest_0031 +0.9 1.2 Uncharacterized conserved protein compare
Psest_2025 +0.9 2.1 cold shock domain protein CspD compare
Psest_2517 +0.9 4.7 hypothetical protein compare
Psest_0662 +0.9 2.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Psest_2023 +0.9 4.8 isocitrate dehydrogenase, NADP-dependent, monomeric type compare
Psest_1840 +0.9 8.6 Undecaprenyl-phosphate glucose phosphotransferase compare
Psest_2810 +0.9 5.7 5'/3'-nucleotidase SurE compare
Psest_3447 +0.9 0.5 Uncharacterized MobA-related protein compare
Psest_0133 +0.9 1.9 type VI secretion protein, VC_A0107 family compare
Psest_1087 +0.9 1.7 uncharacterized peroxidase-related enzyme compare
Psest_3896 +0.8 1.7 arsenite-activated ATPase ArsA compare
Psest_3850 +0.8 1.2 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Psest_1082 +0.8 1.7 Enoyl-CoA hydratase/carnithine racemase compare
Psest_3816 +0.7 0.8 DNA-directed RNA polymerase, omega subunit compare
Psest_0568 +0.7 2.0 pseudouridine synthase compare
Psest_1195 +0.7 2.7 xanthine permease compare
Psest_2308 +0.7 1.2 Predicted Fe-S protein compare
Psest_3069 +0.7 2.4 3-oxoadipate enol-lactonase compare
Psest_1974 +0.7 3.1 integration host factor, alpha subunit compare
Psest_1601 +0.7 1.1 Signal transduction histidine kinase compare
Psest_4291 +0.7 3.4 agmatine deiminase compare
Psest_4088 +0.7 2.6 Transcriptional regulators compare
Psest_0378 +0.7 1.1 Lactate dehydrogenase and related dehydrogenases compare
Psest_1602 +0.6 1.7 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Psest_2150 +0.6 1.7 DNA polymerase LigD, polymerase domain compare
Psest_4316 +0.6 2.5 ABC-type metal ion transport system, periplasmic component/surface antigen compare
Psest_0289 +0.6 3.5 Predicted membrane protein compare
Psest_1679 +0.6 1.5 ribonuclease, Rne/Rng family compare
Psest_2961 +0.6 2.5 Flagellar basal-body P-ring protein compare
Psest_4082 +0.6 1.9 hypothetical protein compare
Psest_1360 +0.6 1.8 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components compare
Psest_1556 +0.6 3.4 hypothetical protein compare
Psest_2282 +0.6 2.4 Dihydroorotate dehydrogenase compare
Psest_1562 +0.6 1.4 Uncharacterized protein conserved in bacteria compare
Psest_1161 +0.6 1.4 E3 Ubiquitin ligase. compare
Psest_3984 +0.6 2.6 Methyl-accepting chemotaxis protein compare
Psest_3766 +0.6 1.6 Uncharacterized protein conserved in bacteria compare
Psest_2953 +0.6 1.1 Histone acetyltransferase compare
Psest_1349 +0.6 1.8 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) compare
Psest_3862 +0.6 4.7 phosphoenolpyruvate-protein phosphotransferase compare
Psest_3962 +0.6 1.3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED compare
Psest_4004 +0.6 1.7 Uncharacterized conserved protein compare
Psest_3803 +0.6 1.0 DNA repair protein radc compare
Psest_1940 +0.6 1.7 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain compare
Psest_3853 +0.6 1.4 ABC-type branched-chain amino acid transport systems, ATPase component compare
Psest_1398 +0.6 2.1 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component compare
Psest_4161 +0.6 1.8 Flagellar basal body-associated protein compare
Psest_1750 +0.5 2.2 Protein of unknown function (DUF2802). compare
Psest_4183 +0.5 1.2 PilZ domain. compare
Psest_2809 +0.5 2.0 protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
Psest_2333 +0.5 1.2 Protein of unknown function (DUF3359). compare
Psest_4343 +0.5 1.5 Protein of unknown function (DUF3301). compare
Psest_0319 +0.5 3.2 Predicted ferric reductase compare
Psest_3973 +0.5 1.3 Anti-sigma regulatory factor (Ser/Thr protein kinase) compare
Psest_2015 +0.5 2.4 Type II secretory pathway, component PulD compare
Psest_0028 +0.5 1.4 Coproporphyrinogen III oxidase compare
Psest_2730 +0.5 2.7 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Psest_0697 +0.5 2.4 ribosomal protein L9 compare
Psest_2429 +0.5 1.8 Predicted branched-chain amino acid permease (azaleucine resistance) compare
Psest_0050 +0.5 2.2 Predicted acetyltransferase compare
Psest_2773 +0.5 3.7 glycerol kinase compare
Psest_3660 +0.5 3.2 PAS domain S-box compare
Psest_1053 +0.5 1.3 hypothetical protein compare
Psest_3400 +0.5 1.0 Copper resistance protein D. compare
Psest_3536 +0.5 1.0 hypothetical protein compare
Psest_0046 +0.5 2.5 Uncharacterized protein conserved in bacteria compare
Psest_0550 +0.5 2.7 Predicted permease, DMT superfamily compare
Psest_2980 +0.5 4.1 oxaloacetate decarboxylase alpha subunit compare
Psest_1765 +0.5 3.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Psest_0956 +0.5 3.8 Transcriptional regulators compare
Psest_2798 +0.5 1.7 Truncated hemoglobins compare
Psest_2716 +0.5 1.2 ABC-type multidrug transport system, ATPase component compare
Psest_4324 +0.5 2.1 DNA repair photolyase compare
Psest_4056 +0.5 1.2 FMN reductase, SsuE family compare
Psest_1554 +0.5 2.4 Outer membrane protein and related peptidoglycan-associated (lipo)proteins compare
Psest_1016 +0.5 2.3 putative TIM-barrel protein, nifR3 family compare
Psest_3215 +0.5 2.3 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
Psest_2315 +0.5 2.8 RraA famliy compare
Psest_3955 +0.5 1.7 Uncharacterized protein conserved in bacteria compare
Psest_2334 +0.5 4.0 Uncharacterized protein conserved in bacteria compare
Psest_3507 +0.5 1.2 FOG: EAL domain compare
Psest_4335 +0.5 1.4 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems compare
Psest_1874 +0.5 1.6 AraC-type DNA-binding domain-containing proteins compare
Psest_2744 +0.5 1.2 Uncharacterized conserved protein compare
Psest_2772 +0.5 2.8 MIP family channel proteins compare
Psest_3146 +0.5 1.1 hypothetical protein compare
Psest_0575 +0.5 0.5 HrpA-like helicases compare
Psest_3992 +0.5 2.4 Uncharacterized protein conserved in archaea compare
Psest_4318 +0.5 2.0 Predicted dioxygenase of extradiol dioxygenase family compare
Psest_4076 +0.5 2.9 hypothetical protein compare
Psest_2268 +0.4 2.3 Alcohol dehydrogenase, class IV compare
Psest_3088 +0.4 1.3 Protein of unknown function (DUF2905). compare
Psest_2882 +0.4 2.0 hypothetical protein compare
Psest_1792 +0.4 1.8 RND family efflux transporter, MFP subunit compare
Psest_0137 +0.4 2.8 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family compare
Psest_2332 +0.4 3.4 Predicted acetyltransferase compare
Psest_3965 +0.4 2.0 hypothetical protein compare
Psest_0275 +0.4 1.3 Protein of unknown function (DUF3392). compare
Psest_0437 +0.4 1.7 hypothetical protein compare
Psest_3824 +0.4 1.0 Predicted membrane protein compare
Psest_1335 +0.4 3.5 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) (from data) compare
Psest_2766 +0.4 0.8 hypothetical protein compare
Psest_0908 +0.4 2.4 hypothetical protein compare
Psest_0014 +0.4 1.3 PilZ domain. compare
Psest_0311 +0.4 1.6 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family compare
Psest_3678 +0.4 2.4 acyl-phosphate glycerol 3-phosphate acyltransferase compare
Psest_0159 +0.4 1.7 Uncharacterized protein conserved in bacteria compare
Psest_3563 +0.4 1.7 ABC-type transport system, involved in lipoprotein release, permease component compare
Psest_3519 +0.4 1.0 Uncharacterized conserved protein compare
Psest_1233 +0.4 2.5 hypothetical protein compare
Psest_2271 +0.4 1.3 coenzyme PQQ biosynthesis protein PqqD compare
Psest_4221 +0.4 1.9 homoserine kinase, Neisseria type compare
Psest_1986 +0.4 0.8 3-phosphoshikimate 1-carboxyvinyltransferase compare
Psest_0805 +0.4 1.1 hypothetical protein compare
Psest_4009 +0.4 2.0 conserverd hypothetical protein compare
Psest_4410 +0.4 2.2 hypothetical protein compare
Psest_2260 +0.4 3.7 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Psest_0466 +0.4 1.8 Lipopolysaccharide kinase (Kdo/WaaP) family. compare
Psest_3974 +0.4 2.5 Anti-sigma regulatory factor (Ser/Thr protein kinase) compare
Psest_1837 +0.4 2.6 Endoglucanase compare
Psest_3317 +0.4 1.7 Phosphotransferase System HPr (HPr) Family compare
Psest_4366 +0.4 2.1 Multisubunit Na+/H+ antiporter, MnhG subunit compare
Psest_0959 +0.4 1.5 Uncharacterized protein conserved in bacteria compare
Psest_3990 +0.4 2.5 PAP2 superfamily. compare
Psest_3422 +0.4 1.5 hypothetical protein compare
Psest_1600 +0.4 1.2 hypothetical protein compare
Psest_2321 +0.4 2.3 methylisocitrate lyase compare
Psest_3979 +0.4 1.3 Fructose-2,6-bisphosphatase compare
Psest_0318 +0.4 2.1 NAD-dependent DNA ligase (contains BRCT domain type II) compare
Psest_0020 +0.4 1.4 K+ transport systems, NAD-binding component compare
Psest_3115 +0.4 2.8 electron transport complex, RnfABCDGE type, D subunit compare
Psest_0263 +0.4 2.3 PAS domain S-box/diguanylate cyclase (GGDEF) domain compare
Psest_1810 +0.4 3.5 UDP-N-acetylglucosamine 4,6-dehydratase compare
Psest_4103 +0.4 0.6 AraC-type DNA-binding domain-containing proteins compare
Psest_2721 +0.4 3.4 HD-GYP domain compare
Psest_4008 +0.4 3.0 PAS domain S-box compare
Psest_0765 +0.4 1.4 hypothetical protein compare
Psest_1535 +0.4 2.0 FKBP-type peptidyl-prolyl cis-trans isomerases 1 compare
Psest_0061 +0.4 0.8 hypothetical protein compare
Psest_0499 +0.4 2.0 hypothetical protein compare
Psest_0457 +0.4 1.5 Lipopolysaccharide kinase (Kdo/WaaP) family. compare
Psest_0485 +0.4 0.9 clan AA aspartic protease, TIGR02281 family compare
Psest_2847 +0.4 1.7 Multisubunit Na+/H+ antiporter, MnhF subunit compare
Psest_1363 +0.4 1.8 Predicted membrane protein compare
Psest_2419 +0.4 1.5 AraC-type DNA-binding domain-containing proteins compare
Psest_4255 +0.4 1.9 conserved hypothetical integral membrane protein compare
Psest_2261 +0.4 2.1 hypothetical protein compare
Psest_0449 +0.4 2.9 Glutamine synthetase adenylyltransferase compare
Psest_1184 +0.4 1.3 Uncharacterized protein, possibly involved in utilization of glycolate and propanediol compare
Psest_0459 +0.4 2.9 Predicted carbamoyl transferase, NodU family compare
Psest_1218 +0.4 1.1 Predicted endonuclease containing a URI domain compare
Psest_1817 +0.4 1.5 hypothetical protein compare
Psest_1528 +0.4 1.4 Acetyltransferases, including N-acetylases of ribosomal proteins compare
Psest_0136 +0.4 2.8 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family compare
Psest_0922 +0.4 0.9 alkylhydroperoxidase AhpD family core domain compare
Psest_0717 +0.4 3.1 Protein of unknown function (DUF1631). compare
Psest_0693 +0.4 3.5 His Kinase A (phosphoacceptor) domain./PAS fold./Response regulator receiver domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. compare
Psest_1230 +0.4 0.8 Uncharacterized protein conserved in bacteria compare
Psest_2791 +0.4 2.2 hypothetical protein compare
Psest_1165 +0.4 2.1 Lysine efflux permease compare
Psest_4382 +0.4 3.1 hypothetical protein compare
Psest_2091 +0.4 1.7 Molecular chaperone (small heat shock protein) compare
Psest_0276 +0.4 1.8 putative oxygen-independent coproporphyrinogen III oxidase compare
Psest_0138 +0.4 2.3 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain compare
Psest_3925 +0.4 1.4 Methyl-accepting chemotaxis protein compare
Psest_4203 +0.4 1.5 NAD/NADP transhydrogenase alpha subunit compare
Psest_4023 +0.4 1.7 hypothetical protein compare
Psest_3877 +0.4 2.2 Predicted membrane protein compare
Psest_4380 +0.4 2.1 Domain of Unknown Function (DUF326). compare
Psest_0462 +0.4 3.4 Lipid A core - O-antigen ligase and related enzymes compare
Psest_2278 +0.4 1.9 coenzyme PQQ biosynthesis protein PqqD compare
Psest_0262 +0.3 3.2 PAS domain S-box compare
Psest_2448 +0.3 1.2 AraC-type DNA-binding domain-containing proteins compare
Psest_2468 +0.3 2.3 uncharacterized domain 1 compare
Psest_4064 +0.3 1.2 Lactate dehydrogenase and related dehydrogenases compare
Psest_1870 +0.3 0.4 Transcriptional regulators compare
Psest_3044 +0.3 2.1 deoxycytidine triphosphate deaminase compare
Psest_0271 +0.3 2.7 ornithine carbamoyltransferase compare
Psest_4258 +0.3 0.6 ABC-type uncharacterized transport system, auxiliary component compare
Psest_3883 +0.3 1.6 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Psest_0039 +0.3 2.0 phosphoglucomutase, alpha-D-glucose phosphate-specific compare
Psest_0250 +0.3 2.9 Glycosyltransferases, probably involved in cell wall biogenesis compare
Psest_2551 +0.3 2.5 1-aminocyclopropane-1-carboxylate deaminase compare
Psest_1025 +0.3 2.0 ABC-type hemin transport system, ATPase component compare
Psest_2718 +0.3 0.7 hypothetical protein compare


Specific Phenotypes

For 1 genes in this experiment

For stress MreB Perturbing Compound A22 in Pseudomonas stutzeri RCH2

For stress MreB Perturbing Compound A22 across organisms