Experiment set6S82 for Lysobacter sp. OAE881

Compare to:

R2A with 1-octen-3-ol 1.08545883333333 mM

200 most detrimental genes:

  gene name fitness t score description  
ABIE51_RS00875 +1.5 10.5 response regulator transcription factor compare
ABIE51_RS17985 +1.4 11.4 efflux RND transporter periplasmic adaptor subunit compare
ABIE51_RS17980 +1.3 12.7 multidrug efflux RND transporter permease subunit compare
ABIE51_RS00870 +1.3 8.2 hypothetical protein compare
ABIE51_RS00880 +1.2 9.1 ATP-binding protein compare
ABIE51_RS16970 +1.2 2.4 sensor histidine kinase compare
ABIE51_RS16595 +1.0 7.6 EAL domain-containing protein compare
ABIE51_RS16750 +1.0 5.6 response regulator transcription factor compare
ABIE51_RS15380 +1.0 4.4 Grx4 family monothiol glutaredoxin compare
ABIE51_RS01060 +0.9 8.5 multidrug efflux RND transporter permease subunit compare
ABIE51_RS04190 +0.9 2.9 indole-3-glycerol phosphate synthase TrpC compare
ABIE51_RS14600 +0.9 7.1 GNAT family N-acetyltransferase compare
ABIE51_RS03960 +0.8 1.2 bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA compare
ABIE51_RS01055 +0.8 6.3 efflux RND transporter periplasmic adaptor subunit compare
ABIE51_RS16645 +0.8 6.9 ATP-binding protein compare
ABIE51_RS04850 +0.8 7.0 sigma-54 dependent transcriptional regulator compare
ABIE51_RS11975 +0.8 1.9 response regulator compare
ABIE51_RS16770 +0.7 3.8 sigma-54 dependent transcriptional regulator compare
ABIE51_RS12675 +0.7 4.9 amidohydrolase family protein compare
ABIE51_RS05160 +0.7 2.3 hypothetical protein compare
ABIE51_RS06325 +0.7 3.8 alpha/beta hydrolase compare
ABIE51_RS01065 +0.7 4.7 SDR family oxidoreductase compare
ABIE51_RS15410 +0.6 1.0 FHA domain-containing protein compare
ABIE51_RS11560 +0.6 5.6 two-component system response regulator compare
ABIE51_RS05005 +0.6 1.0 PhzF family phenazine biosynthesis isomerase compare
ABIE51_RS01040 +0.6 4.4 LysR family transcriptional regulator compare
ABIE51_RS01070 +0.6 4.7 efflux transporter outer membrane subunit compare
ABIE51_RS08475 +0.6 5.2 bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase compare
ABIE51_RS18515 +0.6 1.7 tRNA-Leu compare
ABIE51_RS05555 +0.6 1.3 NAD(P) transhydrogenase subunit alpha compare
ABIE51_RS02910 +0.6 1.0 (2Fe-2S)-binding protein compare
ABIE51_RS13550 +0.6 2.2 tRNA-Ala compare
ABIE51_RS06770 +0.6 1.5 hypothetical protein compare
ABIE51_RS16685 +0.6 5.1 flagellar hook protein FlgE compare
ABIE51_RS10930 +0.6 1.9 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
ABIE51_RS15235 +0.6 2.5 MerR family transcriptional regulator compare
ABIE51_RS16700 +0.5 4.8 flagellar basal body L-ring protein FlgH compare
ABIE51_RS16410 +0.5 3.0 hemin uptake protein HemP compare
ABIE51_RS13245 +0.5 2.3 phosphoglycerate dehydrogenase compare
ABIE51_RS11185 +0.5 1.7 hypothetical protein compare
ABIE51_RS16660 +0.5 4.0 flagellar basal body P-ring formation chaperone FlgA compare
ABIE51_RS16010 +0.5 1.7 prolyl oligopeptidase family serine peptidase compare
ABIE51_RS17600 +0.5 3.0 efflux RND transporter periplasmic adaptor subunit compare
ABIE51_RS17595 +0.5 4.1 efflux RND transporter permease subunit compare
ABIE51_RS00730 +0.5 1.2 5-demethoxyubiquinol-8 5-hydroxylase UbiM compare
ABIE51_RS10495 +0.5 1.7 MarC family NAAT transporter compare
ABIE51_RS11580 +0.5 2.1 response regulator transcription factor compare
ABIE51_RS01220 +0.5 1.7 aldehyde-activating protein compare
ABIE51_RS04505 +0.5 2.6 phosphoribosylformylglycinamidine synthase compare
ABIE51_RS08245 +0.5 2.4 tRNA pseudouridine(38-40) synthase TruA compare
ABIE51_RS16710 +0.5 3.8 flagellar assembly peptidoglycan hydrolase FlgJ compare
ABIE51_RS15890 +0.5 2.1 phosphoribosylformylglycinamidine cyclo-ligase compare
ABIE51_RS08840 +0.5 2.7 efflux RND transporter periplasmic adaptor subunit compare
ABIE51_RS02265 +0.5 1.4 glycosyltransferase family 2 protein compare
ABIE51_RS07580 +0.4 2.3 CoA pyrophosphatase compare
ABIE51_RS16865 +0.4 3.8 RNA polymerase sigma factor FliA compare
ABIE51_RS15690 +0.4 2.8 LysE family translocator compare
ABIE51_RS06180 +0.4 2.2 amidophosphoribosyltransferase compare
ABIE51_RS15990 +0.4 1.2 PTS sugar transporter subunit IIA compare
ABIE51_RS09355 +0.4 1.1 lipopolysaccharide assembly protein LapA domain-containing protein compare
ABIE51_RS17805 +0.4 3.1 NAD(+) diphosphatase compare
ABIE51_RS02335 +0.4 1.8 carbohydrate kinase compare
ABIE51_RS16885 +0.4 3.0 flagellar motor protein compare
ABIE51_RS16800 +0.4 2.9 flagellar export protein FliJ compare
ABIE51_RS16695 +0.4 3.2 flagellar basal-body rod protein FlgG compare
ABIE51_RS09015 +0.4 1.4 class II fumarate hydratase compare
ABIE51_RS12865 +0.4 2.1 VOC family protein compare
ABIE51_RS02785 +0.4 0.7 DUF2946 family protein compare
ABIE51_RS06150 +0.4 3.7 S46 family peptidase compare
ABIE51_RS16765 +0.4 2.2 response regulator transcription factor compare
ABIE51_RS10040 +0.4 1.2 Ohr family peroxiredoxin compare
ABIE51_RS07390 +0.4 1.3 glycosyl hydrolase compare
ABIE51_RS11865 +0.4 1.9 hypothetical protein compare
ABIE51_RS11555 +0.4 3.1 response regulator compare
ABIE51_RS14885 +0.4 0.6 DUF1428 domain-containing protein compare
ABIE51_RS11090 +0.4 1.2 cupin domain-containing protein compare
ABIE51_RS06370 +0.4 1.0 hypothetical protein compare
ABIE51_RS09900 +0.4 1.6 DUF202 domain-containing protein compare
ABIE51_RS07260 +0.4 1.1 hypothetical protein compare
ABIE51_RS03225 +0.4 1.9 ABC transporter ATP-binding protein compare
ABIE51_RS14540 +0.4 1.2 hypothetical protein compare
ABIE51_RS08940 +0.4 1.3 peroxiredoxin compare
ABIE51_RS08255 +0.4 2.2 LysR family transcriptional regulator compare
ABIE51_RS06155 +0.4 1.6 DUF3224 domain-containing protein compare
ABIE51_RS15530 +0.3 1.4 YbdD/YjiX family protein compare
ABIE51_RS09595 +0.3 2.1 CorA family divalent cation transporter compare
ABIE51_RS13330 +0.3 1.0 ATP phosphoribosyltransferase compare
ABIE51_RS14300 +0.3 2.7 GNAT family N-acetyltransferase compare
ABIE51_RS05205 +0.3 1.7 energy transducer TonB compare
ABIE51_RS10840 +0.3 0.7 ferritin-like domain-containing protein compare
ABIE51_RS03610 +0.3 2.5 xylulokinase compare
ABIE51_RS06260 +0.3 1.5 methylated-DNA--[protein]-cysteine S-methyltransferase compare
ABIE51_RS06950 +0.3 2.8 RNA polymerase sigma factor compare
ABIE51_RS08260 +0.3 2.3 tryptophan synthase subunit beta compare
ABIE51_RS11030 +0.3 1.2 xanthine dehydrogenase family protein subunit M compare
ABIE51_RS06385 +0.3 2.4 C40 family peptidase compare
ABIE51_RS03015 +0.3 1.4 YbaN family protein compare
ABIE51_RS10650 +0.3 1.6 HlyD family secretion protein compare
ABIE51_RS05660 +0.3 0.6 helix-turn-helix domain-containing protein compare
ABIE51_RS00160 +0.3 1.0 hypothetical protein compare
ABIE51_RS05225 +0.3 1.0 chemotaxis protein CheW compare
ABIE51_RS10225 +0.3 1.3 NAD(P)H-hydrate dehydratase compare
ABIE51_RS09930 +0.3 0.9 iron uptake protein compare
ABIE51_RS19235 +0.3 3.1 outer membrane protein transport protein compare
ABIE51_RS06710 +0.3 1.6 thioredoxin compare
ABIE51_RS03835 +0.3 1.3 hypothetical protein compare
ABIE51_RS17445 +0.3 0.8 LON peptidase substrate-binding domain-containing protein compare
ABIE51_RS03785 +0.3 1.8 N-acetylmuramoyl-L-alanine amidase compare
ABIE51_RS11810 +0.3 1.6 response regulator compare
ABIE51_RS16705 +0.3 1.9 flagellar basal body P-ring protein FlgI compare
ABIE51_RS08265 +0.3 2.1 tryptophan synthase subunit alpha compare
ABIE51_RS14590 +0.3 1.7 response regulator transcription factor compare
ABIE51_RS16025 +0.3 1.1 YqgE/AlgH family protein compare
ABIE51_RS16120 +0.3 1.1 YceI family protein compare
ABIE51_RS02730 +0.3 1.7 alpha/beta fold hydrolase compare
ABIE51_RS14420 +0.3 1.8 sensor domain-containing diguanylate cyclase compare
ABIE51_RS15135 +0.3 1.2 hypothetical protein compare
ABIE51_RS10875 +0.3 1.4 M23 family metallopeptidase compare
ABIE51_RS14715 +0.3 1.0 efflux RND transporter permease subunit compare
ABIE51_RS09060 +0.3 2.0 FKBP-type peptidyl-prolyl cis-trans isomerase compare
ABIE51_RS07495 +0.3 1.8 lipid A deacylase LpxR family protein compare
ABIE51_RS08775 +0.3 0.9 pseudouridine synthase compare
ABIE51_RS05230 +0.3 2.2 methyl-accepting chemotaxis protein compare
ABIE51_RS07905 +0.3 0.8 polysaccharide deacetylase family protein compare
ABIE51_RS16870 +0.3 1.1 chemotaxis response regulator CheY compare
ABIE51_RS10855 +0.3 1.4 DNA/RNA non-specific endonuclease compare
ABIE51_RS02575 +0.3 0.6 HlyD family secretion protein compare
ABIE51_RS06960 +0.3 2.5 TonB-dependent receptor compare
ABIE51_RS10090 +0.3 1.4 efflux RND transporter permease subunit compare
ABIE51_RS04265 +0.3 2.3 OmpA family protein compare
ABIE51_RS09235 +0.3 0.5 hypothetical protein compare
ABIE51_RS00215 +0.3 1.3 pseudouridine synthase compare
ABIE51_RS01085 +0.3 1.3 HAD family hydrolase compare
ABIE51_RS16095 +0.3 0.5 shikimate kinase compare
ABIE51_RS07790 +0.3 1.4 CinA family protein compare
ABIE51_RS06055 +0.3 1.8 hypothetical protein compare
ABIE51_RS01045 +0.3 0.5 hypothetical protein compare
ABIE51_RS11040 +0.3 0.9 hypothetical protein compare
ABIE51_RS16790 +0.3 1.0 FliH/SctL family protein compare
ABIE51_RS17845 +0.3 2.0 RNA pyrophosphohydrolase compare
ABIE51_RS14475 +0.3 2.0 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL compare
ABIE51_RS12545 +0.3 2.4 asparagine synthase (glutamine-hydrolyzing) compare
ABIE51_RS10480 +0.3 0.6 helix-turn-helix domain-containing protein compare
ABIE51_RS08145 +0.3 1.3 5-oxoprolinase subunit PxpB compare
ABIE51_RS10910 +0.3 2.2 cellulase family glycosylhydrolase compare
ABIE51_RS16795 +0.3 2.1 flagellar protein export ATPase FliI compare
ABIE51_RS11750 +0.3 0.9 CBS domain-containing protein compare
ABIE51_RS10935 +0.3 1.6 galactonate dehydratase compare
ABIE51_RS05580 +0.3 1.3 hypothetical protein compare
ABIE51_RS13300 +0.3 1.0 imidazole glycerol phosphate synthase subunit HisF compare
ABIE51_RS08015 +0.3 1.7 polynucleotide adenylyltransferase PcnB compare
ABIE51_RS09020 +0.3 1.6 DUF2884 family protein compare
ABIE51_RS08580 +0.3 1.7 hypothetical protein compare
ABIE51_RS05485 +0.3 1.7 alkyl hydroperoxide reductase subunit C compare
ABIE51_RS06630 +0.3 1.2 ROK family protein compare
ABIE51_RS03670 +0.3 1.2 endo-1,4-beta-xylanase compare
ABIE51_RS15720 +0.3 1.9 SET domain-containing protein-lysine N-methyltransferase compare
ABIE51_RS06620 +0.3 2.1 alpha/beta hydrolase compare
ABIE51_RS00175 +0.3 2.0 NHLP-related RiPP peptide compare
ABIE51_RS01750 +0.3 1.8 AMP-binding protein compare
ABIE51_RS09030 +0.3 0.8 GDSL-type esterase/lipase family protein compare
ABIE51_RS12925 +0.3 1.5 hypothetical protein compare
ABIE51_RS11860 +0.3 1.6 TSUP family transporter compare
ABIE51_RS04205 +0.3 1.7 GNAT family N-acetyltransferase compare
ABIE51_RS17520 +0.3 1.3 bifunctional aspartate kinase/homoserine dehydrogenase I compare
ABIE51_RS07040 +0.3 1.7 hypothetical protein compare
ABIE51_RS07875 +0.3 0.5 alpha/beta hydrolase compare
ABIE51_RS09800 +0.3 0.6 VOC family protein compare
ABIE51_RS14675 +0.3 1.0 response regulator compare
ABIE51_RS16880 +0.3 1.2 chemotaxis protein CheA compare
ABIE51_RS03165 +0.3 2.4 D-alanyl-D-alanine carboxypeptidase family protein compare
ABIE51_RS13385 +0.3 1.1 N-acetyl-gamma-glutamyl-phosphate reductase compare
ABIE51_RS00035 +0.3 2.4 peptidoglycan DD-metalloendopeptidase family protein compare
ABIE51_RS04290 +0.2 2.3 UDP-glucose 4-epimerase GalE compare
ABIE51_RS05630 +0.2 1.0 NAD(P)H:quinone oxidoreductase compare
ABIE51_RS06790 +0.2 2.1 YhdP family protein compare
ABIE51_RS08440 +0.2 1.4 HAMP domain-containing sensor histidine kinase compare
ABIE51_RS16860 +0.2 0.5 MinD/ParA family protein compare
ABIE51_RS10625 +0.2 1.6 alpha/beta hydrolase compare
ABIE51_RS18870 +0.2 1.6 lysozyme inhibitor LprI family protein compare
ABIE51_RS07700 +0.2 1.9 formyltetrahydrofolate deformylase compare
ABIE51_RS01440 +0.2 0.8 P-II family nitrogen regulator compare
ABIE51_RS19200 +0.2 1.1 hypothetical protein compare
ABIE51_RS07680 +0.2 1.6 hypothetical protein compare
ABIE51_RS17690 +0.2 2.1 helix-turn-helix transcriptional regulator compare
ABIE51_RS14380 +0.2 1.0 DUF4242 domain-containing protein compare
ABIE51_RS11670 +0.2 1.4 RnfH family protein compare
ABIE51_RS10145 +0.2 1.5 polysaccharide deacetylase family protein compare
ABIE51_RS03730 +0.2 0.9 hypothetical protein compare
ABIE51_RS03740 +0.2 1.8 response regulator transcription factor compare
ABIE51_RS01910 +0.2 1.3 LolA-related protein compare
ABIE51_RS02565 +0.2 1.0 zinc-dependent alcohol dehydrogenase compare
ABIE51_RS01935 +0.2 1.0 glycosyltransferase family 2 protein compare
ABIE51_RS10660 +0.2 1.4 alternative oxidase compare
ABIE51_RS11500 +0.2 1.5 hypothetical protein compare
ABIE51_RS13590 +0.2 0.7 hypothetical protein compare
ABIE51_RS16850 +0.2 2.1 flagellar biosynthesis protein FlhA compare
ABIE51_RS13930 +0.2 1.4 aminodeoxychorismate synthase component I compare
ABIE51_RS12430 +0.2 1.3 hypothetical protein compare
ABIE51_RS10620 +0.2 0.6 response regulator transcription factor compare


Specific Phenotypes

None in this experiment

For Lysobacter sp. OAE881 in stress experiments

For stress 1-octen-3-ol across organisms