Experiment set6S80 for Lysobacter sp. OAE881

Compare to:

R2A with 1-octen-3-ol 1.08545883333333 mM

200 most detrimental genes:

  gene name fitness t score description  
ABIE51_RS00875 +1.4 6.9 response regulator transcription factor compare
ABIE51_RS17980 +1.2 11.7 multidrug efflux RND transporter permease subunit compare
ABIE51_RS17985 +1.2 10.5 efflux RND transporter periplasmic adaptor subunit compare
ABIE51_RS16750 +1.1 5.6 response regulator transcription factor compare
ABIE51_RS00880 +1.1 8.6 ATP-binding protein compare
ABIE51_RS00870 +1.1 6.3 hypothetical protein compare
ABIE51_RS01060 +1.0 8.4 multidrug efflux RND transporter permease subunit compare
ABIE51_RS16970 +0.9 1.7 sensor histidine kinase compare
ABIE51_RS10195 +0.9 1.7 anti-sigma regulatory factor compare
ABIE51_RS14600 +0.9 6.7 GNAT family N-acetyltransferase compare
ABIE51_RS07135 +0.8 1.8 YdaS family helix-turn-helix protein compare
ABIE51_RS01055 +0.8 6.1 efflux RND transporter periplasmic adaptor subunit compare
ABIE51_RS05660 +0.8 1.4 helix-turn-helix domain-containing protein compare
ABIE51_RS04850 +0.8 6.3 sigma-54 dependent transcriptional regulator compare
ABIE51_RS16645 +0.7 6.3 ATP-binding protein compare
ABIE51_RS00730 +0.7 2.3 5-demethoxyubiquinol-8 5-hydroxylase UbiM compare
ABIE51_RS01040 +0.7 4.9 LysR family transcriptional regulator compare
ABIE51_RS09880 +0.7 2.3 Na+/H+ antiporter subunit E compare
ABIE51_RS07145 +0.7 1.1 helix-turn-helix transcriptional regulator compare
ABIE51_RS16595 +0.7 5.0 EAL domain-containing protein compare
ABIE51_RS12675 +0.7 5.2 amidohydrolase family protein compare
ABIE51_RS18250 +0.7 2.5 hypothetical protein compare
ABIE51_RS01065 +0.7 4.4 SDR family oxidoreductase compare
ABIE51_RS07170 +0.6 1.3 hypothetical protein compare
ABIE51_RS15410 +0.6 0.9 FHA domain-containing protein compare
ABIE51_RS11560 +0.6 5.5 two-component system response regulator compare
ABIE51_RS16770 +0.6 3.2 sigma-54 dependent transcriptional regulator compare
ABIE51_RS10840 +0.6 1.2 ferritin-like domain-containing protein compare
ABIE51_RS15380 +0.6 2.6 Grx4 family monothiol glutaredoxin compare
ABIE51_RS08475 +0.6 4.2 bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase compare
ABIE51_RS16660 +0.6 4.3 flagellar basal body P-ring formation chaperone FlgA compare
ABIE51_RS14485 +0.6 1.2 MOSC domain-containing protein compare
ABIE51_RS16410 +0.6 2.9 hemin uptake protein HemP compare
ABIE51_RS15970 +0.6 2.0 HPr(Ser) kinase/phosphatase compare
ABIE51_RS10235 +0.6 1.0 pyridoxamine 5'-phosphate oxidase family protein compare
ABIE51_RS15890 +0.6 2.4 phosphoribosylformylglycinamidine cyclo-ligase compare
ABIE51_RS13970 +0.6 1.2 hypothetical protein compare
ABIE51_RS12640 +0.6 1.5 hypothetical protein compare
ABIE51_RS04030 +0.6 2.2 dihydrolipoamide acetyltransferase family protein compare
ABIE51_RS10935 +0.6 2.3 galactonate dehydratase compare
ABIE51_RS16765 +0.6 3.2 response regulator transcription factor compare
ABIE51_RS01070 +0.5 3.3 efflux transporter outer membrane subunit compare
ABIE51_RS17255 +0.5 1.7 YkvA family protein compare
ABIE51_RS16685 +0.5 4.8 flagellar hook protein FlgE compare
ABIE51_RS10550 +0.5 2.5 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
ABIE51_RS05150 +0.5 1.8 Dps family protein compare
ABIE51_RS07130 +0.5 1.5 hypothetical protein compare
ABIE51_RS16700 +0.5 4.2 flagellar basal body L-ring protein FlgH compare
ABIE51_RS19200 +0.5 2.2 hypothetical protein compare
ABIE51_RS08940 +0.5 3.1 peroxiredoxin compare
ABIE51_RS10115 +0.5 1.0 NADH-quinone oxidoreductase subunit K compare
ABIE51_RS11040 +0.5 1.6 hypothetical protein compare
ABIE51_RS06630 +0.5 2.2 ROK family protein compare
ABIE51_RS13050 +0.5 0.9 hypothetical protein compare
ABIE51_RS15695 +0.5 1.7 DUF1439 domain-containing protein compare
ABIE51_RS07080 +0.5 2.8 YqaJ viral recombinase family protein compare
ABIE51_RS06385 +0.5 3.6 C40 family peptidase compare
ABIE51_RS14380 +0.5 2.1 DUF4242 domain-containing protein compare
ABIE51_RS16800 +0.5 2.8 flagellar export protein FliJ compare
ABIE51_RS16865 +0.5 4.0 RNA polymerase sigma factor FliA compare
ABIE51_RS07790 +0.5 2.3 CinA family protein compare
ABIE51_RS16870 +0.5 1.6 chemotaxis response regulator CheY compare
ABIE51_RS03960 +0.5 0.6 bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA compare
ABIE51_RS10805 +0.5 1.5 PQQ-dependent catabolism-associated beta-propeller protein compare
ABIE51_RS12090 +0.5 1.8 arsenic resistance N-acetyltransferase ArsN2 compare
ABIE51_RS15050 +0.5 2.7 uracil phosphoribosyltransferase compare
ABIE51_RS16885 +0.5 2.9 flagellar motor protein compare
ABIE51_RS02720 +0.5 3.3 response regulator compare
ABIE51_RS06180 +0.5 2.2 amidophosphoribosyltransferase compare
ABIE51_RS17595 +0.5 3.2 efflux RND transporter permease subunit compare
ABIE51_RS07065 +0.5 2.0 DUF551 domain-containing protein compare
ABIE51_RS13385 +0.4 2.3 N-acetyl-gamma-glutamyl-phosphate reductase compare
ABIE51_RS18515 +0.4 1.4 tRNA-Leu compare
ABIE51_RS10875 +0.4 2.5 M23 family metallopeptidase compare
ABIE51_RS07895 +0.4 2.3 glycosyltransferase family 4 protein compare
ABIE51_RS06730 +0.4 2.3 LPS assembly lipoprotein LptE compare
ABIE51_RS06370 +0.4 1.2 hypothetical protein compare
ABIE51_RS10135 +0.4 2.6 patatin-like phospholipase family protein compare
ABIE51_RS00490 +0.4 1.1 protein-export chaperone SecB compare
ABIE51_RS15215 +0.4 1.4 DUF1801 domain-containing protein compare
ABIE51_RS07935 +0.4 1.7 CpsD/CapB family tyrosine-protein kinase compare
ABIE51_RS09550 +0.4 1.5 Cu(I)-responsive transcriptional regulator compare
ABIE51_RS09995 +0.4 2.5 pseudouridine synthase compare
ABIE51_RS07510 +0.4 2.1 putative DNA-binding domain-containing protein compare
ABIE51_RS12080 +0.4 1.7 helix-turn-helix transcriptional regulator compare
ABIE51_RS03630 +0.4 2.7 LacI family DNA-binding transcriptional regulator compare
ABIE51_RS07205 +0.4 1.8 hypothetical protein compare
ABIE51_RS14880 +0.4 2.0 RNA polymerase sigma factor compare
ABIE51_RS12735 +0.4 1.7 hypothetical protein compare
ABIE51_RS11975 +0.4 0.8 response regulator compare
ABIE51_RS10885 +0.4 1.7 MarC family NAAT transporter compare
ABIE51_RS08265 +0.4 2.5 tryptophan synthase subunit alpha compare
ABIE51_RS14295 +0.4 2.0 MmcQ/YjbR family DNA-binding protein compare
ABIE51_RS01475 +0.4 1.2 hypothetical protein compare
ABIE51_RS18710 +0.4 2.2 HAD-IA family hydrolase compare
ABIE51_RS13245 +0.4 1.7 phosphoglycerate dehydrogenase compare
ABIE51_RS04190 +0.4 1.2 indole-3-glycerol phosphate synthase TrpC compare
ABIE51_RS18470 +0.4 2.4 DUF1415 domain-containing protein compare
ABIE51_RS07580 +0.4 2.0 CoA pyrophosphatase compare
ABIE51_RS11185 +0.4 1.2 hypothetical protein compare
ABIE51_RS14915 +0.4 1.8 general secretion pathway protein GspB compare
ABIE51_RS16695 +0.4 2.9 flagellar basal-body rod protein FlgG compare
ABIE51_RS15235 +0.4 1.8 MerR family transcriptional regulator compare
ABIE51_RS07190 +0.4 1.2 SANT/Myb-like DNA-binding domain-containing protein compare
ABIE51_RS08900 +0.4 0.7 DUF3011 domain-containing protein compare
ABIE51_RS16710 +0.4 3.1 flagellar assembly peptidoglycan hydrolase FlgJ compare
ABIE51_RS10770 +0.4 1.2 OBAP family protein compare
ABIE51_RS14505 +0.4 2.1 EF-hand domain-containing protein compare
ABIE51_RS09720 +0.4 1.3 response regulator compare
ABIE51_RS18870 +0.4 2.9 lysozyme inhibitor LprI family protein compare
ABIE51_RS07450 +0.4 1.0 glycosyltransferase compare
ABIE51_RS12280 +0.4 1.1 phasin family protein compare
ABIE51_RS06150 +0.4 3.7 S46 family peptidase compare
ABIE51_RS01250 +0.4 1.2 glutamine amidotransferase compare
ABIE51_RS03760 +0.4 1.0 hypothetical protein compare
ABIE51_RS15725 +0.4 0.7 SUF system Fe-S cluster assembly regulator compare
ABIE51_RS06410 +0.4 2.1 glutathione-disulfide reductase compare
ABIE51_RS16350 +0.4 3.5 serine hydrolase domain-containing protein compare
ABIE51_RS03665 +0.4 2.6 SMP-30/gluconolactonase/LRE family protein compare
ABIE51_RS04505 +0.4 2.0 phosphoribosylformylglycinamidine synthase compare
ABIE51_RS14300 +0.4 2.5 GNAT family N-acetyltransferase compare
ABIE51_RS04105 +0.4 1.6 hypothetical protein compare
ABIE51_RS08260 +0.4 2.5 tryptophan synthase subunit beta compare
ABIE51_RS04175 +0.4 1.5 aminodeoxychorismate/anthranilate synthase component II compare
ABIE51_RS01085 +0.4 1.2 HAD family hydrolase compare
ABIE51_RS09850 +0.4 1.7 YaiI/YqxD family protein compare
ABIE51_RS13835 +0.4 2.3 DUF1318 domain-containing protein compare
ABIE51_RS07165 +0.4 2.1 DnaB-like helicase C-terminal domain-containing protein compare
ABIE51_RS06765 +0.4 0.6 energy transducer TonB compare
ABIE51_RS08775 +0.4 0.8 pseudouridine synthase compare
ABIE51_RS08015 +0.4 2.1 polynucleotide adenylyltransferase PcnB compare
ABIE51_RS12185 +0.4 2.1 DUF72 domain-containing protein compare
ABIE51_RS11625 +0.3 1.8 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit compare
ABIE51_RS17805 +0.3 2.6 NAD(+) diphosphatase compare
ABIE51_RS06755 +0.3 1.3 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
ABIE51_RS08245 +0.3 1.4 tRNA pseudouridine(38-40) synthase TruA compare
ABIE51_RS04785 +0.3 2.7 M23 family metallopeptidase compare
ABIE51_RS05250 +0.3 1.2 heparan-alpha-glucosaminide N-acetyltransferase domain-containing protein compare
ABIE51_RS06960 +0.3 3.1 TonB-dependent receptor compare
ABIE51_RS00215 +0.3 1.2 pseudouridine synthase compare
ABIE51_RS04265 +0.3 2.8 OmpA family protein compare
ABIE51_RS03610 +0.3 2.4 xylulokinase compare
ABIE51_RS12190 +0.3 1.4 NAD(P)/FAD-dependent oxidoreductase compare
ABIE51_RS07075 +0.3 1.9 single-stranded DNA-binding protein compare
ABIE51_RS10620 +0.3 0.8 response regulator transcription factor compare
ABIE51_RS06810 +0.3 0.9 DUF4870 domain-containing protein compare
ABIE51_RS10385 +0.3 0.9 VOC family protein compare
ABIE51_RS08145 +0.3 1.3 5-oxoprolinase subunit PxpB compare
ABIE51_RS18595 +0.3 2.4 DUF4031 domain-containing protein compare
ABIE51_RS11315 +0.3 1.0 NADPH-dependent FMN reductase compare
ABIE51_RS00160 +0.3 0.9 hypothetical protein compare
ABIE51_RS16935 +0.3 1.3 hypothetical protein compare
ABIE51_RS11150 +0.3 1.8 thioredoxin family protein compare
ABIE51_RS07060 +0.3 1.2 hypothetical protein compare
ABIE51_RS05530 +0.3 2.3 NAD(P) transhydrogenase subunit alpha compare
ABIE51_RS06070 +0.3 0.7 fructosamine kinase family protein compare
ABIE51_RS04940 +0.3 1.7 hypothetical protein compare
ABIE51_RS12870 +0.3 1.0 mechanosensitive ion channel family protein compare
ABIE51_RS17600 +0.3 2.1 efflux RND transporter periplasmic adaptor subunit compare
ABIE51_RS06710 +0.3 1.6 thioredoxin compare
ABIE51_RS00965 +0.3 1.9 aspartate/glutamate racemase family protein compare
ABIE51_RS07945 +0.3 1.1 hypothetical protein compare
ABIE51_RS19075 +0.3 2.0 complex I NDUFA9 subunit family protein compare
ABIE51_RS03335 +0.3 0.6 hypothetical protein compare
ABIE51_RS15530 +0.3 1.3 YbdD/YjiX family protein compare
ABIE51_RS13200 +0.3 2.4 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha compare
ABIE51_RS09575 +0.3 1.6 response regulator transcription factor compare
ABIE51_RS10920 +0.3 1.8 exo-alpha-sialidase compare
ABIE51_RS06790 +0.3 2.6 YhdP family protein compare
ABIE51_RS01525 +0.3 1.8 histidine phosphatase family protein compare
ABIE51_RS17830 +0.3 1.7 DUF4126 domain-containing protein compare
ABIE51_RS00525 +0.3 2.1 hypothetical protein compare
ABIE51_RS03120 +0.3 1.9 YbaK/EbsC family protein compare
ABIE51_RS11555 +0.3 2.6 response regulator compare
ABIE51_RS05125 +0.3 1.9 hypothetical protein compare
ABIE51_RS10145 +0.3 1.9 polysaccharide deacetylase family protein compare
ABIE51_RS13300 +0.3 1.5 imidazole glycerol phosphate synthase subunit HisF compare
ABIE51_RS10910 +0.3 2.4 cellulase family glycosylhydrolase compare
ABIE51_RS01910 +0.3 1.7 LolA-related protein compare
ABIE51_RS01220 +0.3 1.3 aldehyde-activating protein compare
ABIE51_RS10830 +0.3 0.7 MBL fold metallo-hydrolase compare
ABIE51_RS18920 +0.3 2.4 S-formylglutathione hydrolase compare
ABIE51_RS17345 +0.3 1.4 cell division protein ZapA compare
ABIE51_RS00035 +0.3 2.6 peptidoglycan DD-metalloendopeptidase family protein compare
ABIE51_RS14695 +0.3 1.6 PAS domain-containing sensor histidine kinase compare
ABIE51_RS07495 +0.3 1.5 lipid A deacylase LpxR family protein compare
ABIE51_RS16900 +0.3 1.8 chemotaxis protein CheW compare
ABIE51_RS04125 +0.3 1.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
ABIE51_RS06325 +0.3 1.3 alpha/beta hydrolase compare
ABIE51_RS18315 +0.3 1.4 hypothetical protein compare
ABIE51_RS15355 +0.3 1.7 histidine kinase compare
ABIE51_RS03615 +0.3 2.1 xylose isomerase compare
ABIE51_RS06715 +0.3 1.0 DUF998 domain-containing protein compare
ABIE51_RS07255 +0.3 1.5 serine protease compare
ABIE51_RS07720 +0.3 0.7 MarR family transcriptional regulator compare
ABIE51_RS09930 +0.3 0.8 iron uptake protein compare
ABIE51_RS08795 +0.3 1.6 BolA family protein compare
ABIE51_RS19145 +0.3 2.2 hypothetical protein compare
ABIE51_RS17905 +0.3 1.8 transporter compare
ABIE51_RS18555 +0.3 1.3 cysteine hydrolase family protein compare


Specific Phenotypes

None in this experiment

For Lysobacter sp. OAE881 in stress experiments

For stress 1-octen-3-ol across organisms