Experiment set6S73 for Lysobacter sp. OAE881

Compare to:

R2A with 6-Pentyl-2H-pyran-2-one 0.6266795 mM

200 most important genes:

  gene name fitness t score description  
ABIE51_RS08720 -4.1 -8.2 heme exporter protein CcmB compare
ABIE51_RS14155 -3.8 -7.3 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
ABIE51_RS04805 -3.7 -2.6 A24 family peptidase compare
ABIE51_RS14150 -3.5 -12.5 ATP-dependent Clp protease ATP-binding subunit ClpX compare
ABIE51_RS08695 -3.5 -7.0 DsbE family thiol:disulfide interchange protein compare
ABIE51_RS08705 -3.4 -10.9 cytochrome c maturation protein CcmE compare
ABIE51_RS13480 -3.4 -3.2 phytoene/squalene synthase family protein compare
ABIE51_RS08715 -3.4 -11.5 heme ABC transporter permease CcmC compare
ABIE51_RS17200 -3.3 -8.0 citrate synthase compare
ABIE51_RS08690 -3.2 -2.6 cytochrome c-type biogenesis protein compare
ABIE51_RS08700 -3.2 -13.8 heme lyase CcmF/NrfE family subunit compare
ABIE51_RS04370 -3.2 -14.7 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase compare
ABIE51_RS16395 -3.1 -2.8 PDZ domain-containing protein compare
ABIE51_RS17630 -3.0 -11.1 LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase compare
ABIE51_RS15400 -2.9 -4.9 Trm112 family protein compare
ABIE51_RS17705 -2.9 -15.8 protein-disulfide reductase DsbD compare
ABIE51_RS17095 -2.8 -15.6 type I glyceraldehyde-3-phosphate dehydrogenase compare
ABIE51_RS08865 -2.6 -6.1 glucokinase compare
ABIE51_RS01000 -2.6 -15.3 ABC transporter substrate-binding protein compare
ABIE51_RS16815 -2.6 -12.9 flagellar motor switch protein FliM compare
ABIE51_RS09045 -2.5 -6.4 GntR family transcriptional regulator compare
ABIE51_RS14555 -2.4 -2.9 M15 family metallopeptidase compare
ABIE51_RS09425 -2.4 -5.0 helix-turn-helix domain-containing protein compare
ABIE51_RS16820 -2.2 -8.9 flagellar motor switch protein FliN compare
ABIE51_RS06000 -2.1 -9.6 pyridoxal phosphate-dependent aminotransferase compare
ABIE51_RS17060 -2.0 -8.9 phosphoglycerate kinase compare
ABIE51_RS07575 -2.0 -5.7 FKBP-type peptidyl-prolyl cis-trans isomerase N-terminal domain-containing protein compare
ABIE51_RS08725 -2.0 -4.5 heme ABC exporter ATP-binding protein CcmA compare
ABIE51_RS19265 -2.0 -12.8 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
ABIE51_RS16260 -2.0 -3.6 hypothetical protein compare
ABIE51_RS09775 -1.9 -7.2 cytochrome o ubiquinol oxidase subunit III compare
ABIE51_RS00990 -1.9 -12.1 VacJ family lipoprotein compare
ABIE51_RS09105 -1.9 -1.8 NAD-glutamate dehydrogenase domain-containing protein compare
ABIE51_RS04245 -1.9 -4.9 fumarylacetoacetate hydrolase family protein compare
ABIE51_RS01635 -1.9 -6.9 N-acetylglucosamine-6-phosphate deacetylase compare
ABIE51_RS17270 -1.8 -3.9 DNA-directed RNA polymerase subunit omega compare
ABIE51_RS16830 -1.8 -13.2 flagellar type III secretion system pore protein FliP compare
ABIE51_RS14085 -1.8 -3.4 DUF6165 family protein compare
ABIE51_RS09770 -1.8 -11.2 cytochrome o ubiquinol oxidase subunit I compare
ABIE51_RS16780 -1.8 -9.8 flagellar basal-body MS-ring/collar protein FliF compare
ABIE51_RS16840 -1.8 -11.3 flagellar biosynthetic protein FliR compare
ABIE51_RS13205 -1.8 -2.0 hydroxymethylglutaryl-CoA lyase compare
ABIE51_RS17605 -1.8 -8.7 TetR/AcrR family transcriptional regulator compare
ABIE51_RS16320 -1.7 -7.7 TetR/AcrR family transcriptional regulator compare
ABIE51_RS17040 -1.7 -7.4 pyruvate kinase compare
ABIE51_RS14070 -1.7 -6.9 glycosyltransferase family 9 protein compare
ABIE51_RS17615 -1.7 -10.6 TolC family outer membrane protein compare
ABIE51_RS01010 -1.6 -7.6 MlaE family lipid ABC transporter permease subunit compare
ABIE51_RS18545 -1.6 -1.0 DUF6249 domain-containing protein compare
ABIE51_RS09765 -1.6 -7.8 ubiquinol oxidase subunit II compare
ABIE51_RS11490 -1.6 -13.6 ATP-dependent Clp protease ATP-binding subunit ClpA compare
ABIE51_RS16360 -1.6 -3.5 glycine cleavage system protein GcvH compare
ABIE51_RS00635 -1.6 -11.6 hybrid sensor histidine kinase/response regulator compare
ABIE51_RS11675 -1.6 -6.5 type II toxin-antitoxin system RatA family toxin compare
ABIE51_RS16365 -1.6 -3.6 glycine cleavage system aminomethyltransferase GcvT compare
ABIE51_RS02300 -1.6 -8.7 lauroyl acyltransferase compare
ABIE51_RS09780 -1.6 -1.5 cytochrome o ubiquinol oxidase subunit IV compare
ABIE51_RS19165 -1.6 -6.5 heme o synthase compare
ABIE51_RS17190 -1.5 -5.0 penicillin-binding protein 1A compare
ABIE51_RS09065 -1.5 -11.5 UDP-glucose/GDP-mannose dehydrogenase family protein compare
ABIE51_RS00085 -1.5 -5.1 dUTP diphosphatase compare
ABIE51_RS17665 -1.5 -3.6 mitochondrial fission ELM1 family protein compare
ABIE51_RS05295 -1.5 -8.7 response regulator transcription factor compare
ABIE51_RS04210 -1.5 -11.8 cAMP-activated global transcriptional regulator CRP compare
ABIE51_RS16055 -1.5 -9.3 type IV pilus twitching motility protein PilT compare
ABIE51_RS12565 -1.5 -10.6 acyl-CoA dehydrogenase family protein compare
ABIE51_RS12620 -1.5 -2.6 fumarate hydratase compare
ABIE51_RS01015 -1.4 -6.1 ABC transporter ATP-binding protein compare
ABIE51_RS16845 -1.4 -10.3 flagellar biosynthesis protein FlhB compare
ABIE51_RS16485 -1.4 -1.7 adenosylhomocysteinase compare
ABIE51_RS06015 -1.4 -1.6 methylisocitrate lyase compare
ABIE51_RS16785 -1.4 -4.4 flagellar motor switch protein FliG compare
ABIE51_RS16790 -1.4 -3.0 FliH/SctL family protein compare
ABIE51_RS16760 -1.4 -2.3 RNA polymerase factor sigma-54 compare
ABIE51_RS01005 -1.3 -12.5 outer membrane lipid asymmetry maintenance protein MlaD compare
ABIE51_RS00800 -1.3 -1.7 biopolymer transporter ExbD compare
ABIE51_RS05540 -1.3 -2.1 hypothetical protein compare
ABIE51_RS16850 -1.3 -9.7 flagellar biosynthesis protein FlhA compare
ABIE51_RS09375 -1.3 -9.1 UTP--glucose-1-phosphate uridylyltransferase GalU compare
ABIE51_RS14495 -1.3 -8.6 acyl-CoA thioesterase II compare
ABIE51_RS18820 -1.2 -2.5 NADP-dependent malic enzyme compare
ABIE51_RS16800 -1.2 -5.4 flagellar export protein FliJ compare
ABIE51_RS11455 -1.2 -4.2 DNA translocase FtsK compare
ABIE51_RS06555 -1.2 -6.4 protease modulator HflC compare
ABIE51_RS08210 -1.2 -4.7 SCO family protein compare
ABIE51_RS13145 -1.2 -5.6 acetyl-CoA C-acyltransferase compare
ABIE51_RS14345 -1.2 -4.9 aminomethyl-transferring glycine dehydrogenase compare
ABIE51_RS16675 -1.2 -7.1 flagellar basal body rod protein FlgC compare
ABIE51_RS16735 -1.1 -3.2 flagellar export chaperone FliS compare
ABIE51_RS16795 -1.1 -7.5 flagellar protein export ATPase FliI compare
ABIE51_RS13970 -1.1 -1.5 hypothetical protein compare
ABIE51_RS05045 -1.1 -2.0 Holliday junction branch migration protein RuvA compare
ABIE51_RS03940 -1.1 -7.1 response regulator transcription factor compare
ABIE51_RS00440 -1.1 -7.2 hypothetical protein compare
ABIE51_RS01030 -1.1 -3.0 exodeoxyribonuclease V subunit alpha compare
ABIE51_RS09790 -1.1 -2.6 ATP-binding protein compare
ABIE51_RS01095 -1.0 -5.3 cell division protein ZapE compare
ABIE51_RS15240 -1.0 -2.3 integration host factor subunit alpha compare
ABIE51_RS14215 -1.0 -8.1 M48 family metalloprotease compare
ABIE51_RS00995 -1.0 -4.8 STAS domain-containing protein compare
ABIE51_RS17495 -1.0 -9.6 TonB-dependent receptor compare
ABIE51_RS15660 -1.0 -1.2 PhzF family phenazine biosynthesis protein compare
ABIE51_RS02450 -1.0 -4.0 MarR family transcriptional regulator compare
ABIE51_RS00250 -1.0 -3.7 olefin beta-lactone synthetase compare
ABIE51_RS02825 -1.0 -3.5 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD compare
ABIE51_RS13530 -1.0 -4.5 polyhydroxyalkanoate synthesis repressor PhaR compare
ABIE51_RS16690 -1.0 -5.4 flagellar basal body rod protein FlgF compare
ABIE51_RS16865 -1.0 -5.8 RNA polymerase sigma factor FliA compare
ABIE51_RS10670 -1.0 -1.0 LysR family transcriptional regulator compare
ABIE51_RS13260 -0.9 -6.7 amino acid permease compare
ABIE51_RS14195 -0.9 -2.1 Na+/H+ antiporter NhaC family protein compare
ABIE51_RS01515 -0.9 -6.0 phospholipase D family protein compare
ABIE51_RS02220 -0.9 -3.9 DNA topoisomerase I compare
ABIE51_RS10140 -0.9 -6.5 sugar MFS transporter compare
ABIE51_RS06250 -0.9 -5.0 imidazolonepropionase compare
ABIE51_RS07110 -0.9 -1.9 hypothetical protein compare
ABIE51_RS17740 -0.9 -5.4 hypothetical protein compare
ABIE51_RS06255 -0.9 -6.4 formimidoylglutamate deiminase compare
ABIE51_RS06815 -0.9 -4.7 (2E,6E)-farnesyl diphosphate synthase compare
ABIE51_RS00225 -0.9 -2.7 SCP2 sterol-binding domain-containing protein compare
ABIE51_RS08785 -0.9 -6.3 ScpA family protein compare
ABIE51_RS13720 -0.9 -4.0 aldehyde dehydrogenase family protein compare
ABIE51_RS00695 -0.9 -3.3 ABC transporter permease compare
ABIE51_RS03030 -0.9 -3.0 DUF484 family protein compare
ABIE51_RS10430 -0.9 -1.8 hypothetical protein compare
ABIE51_RS16555 -0.9 -5.3 SLC13 family permease compare
ABIE51_RS13495 -0.9 -3.9 TRZ/ATZ family hydrolase compare
ABIE51_RS16710 -0.9 -5.3 flagellar assembly peptidoglycan hydrolase FlgJ compare
ABIE51_RS15390 -0.9 -1.2 5-(carboxyamino)imidazole ribonucleotide synthase compare
ABIE51_RS15535 -0.8 -1.6 hypothetical protein compare
ABIE51_RS02280 -0.8 -3.6 CDP-glycerol glycerophosphotransferase family protein compare
ABIE51_RS19215 -0.8 -6.9 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA compare
ABIE51_RS09235 -0.8 -0.9 hypothetical protein compare
ABIE51_RS03185 -0.8 -6.2 carboxy terminal-processing peptidase compare
ABIE51_RS08880 -0.8 -5.2 chromosome segregation protein SMC compare
ABIE51_RS07280 -0.8 -1.1 hypothetical protein compare
ABIE51_RS16695 -0.8 -3.3 flagellar basal-body rod protein FlgG compare
ABIE51_RS07100 -0.8 -1.6 hypothetical protein compare
ABIE51_RS13885 -0.8 -3.7 sigma-E factor negative regulatory protein compare
ABIE51_RS15015 -0.8 -2.0 preprotein translocase subunit YajC compare
ABIE51_RS19185 -0.8 -5.4 twin transmembrane helix small protein compare
ABIE51_RS11835 -0.7 -1.4 transcriptional repressor LexA compare
ABIE51_RS04250 -0.7 -3.7 maleylacetoacetate isomerase compare
ABIE51_RS06990 -0.7 -1.9 Spx/MgsR family RNA polymerase-binding regulatory protein compare
ABIE51_RS04065 -0.7 -5.2 oligopeptide:H+ symporter compare
ABIE51_RS18520 -0.7 -1.6 hypothetical protein compare
ABIE51_RS07130 -0.7 -2.2 hypothetical protein compare
ABIE51_RS02260 -0.7 -5.6 glycosyltransferase family 39 protein compare
ABIE51_RS09340 -0.7 -2.4 (d)CMP kinase compare
ABIE51_RS08780 -0.7 -3.1 SMC-Scp complex subunit ScpB compare
ABIE51_RS00105 -0.7 -2.6 SPOR domain-containing protein compare
ABIE51_RS00940 -0.7 -5.0 ferredoxin reductase compare
ABIE51_RS07595 -0.7 -0.9 enoyl-CoA hydratase/isomerase family protein compare
ABIE51_RS16510 -0.7 -4.0 HAMP domain-containing sensor histidine kinase compare
ABIE51_RS04420 -0.7 -4.9 ABC transporter permease compare
ABIE51_RS14145 -0.7 -5.2 endopeptidase La compare
ABIE51_RS06490 -0.7 -2.2 protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
ABIE51_RS12125 -0.6 -1.0 TonB family protein compare
ABIE51_RS07005 -0.6 -3.0 asparagine synthase B compare
ABIE51_RS00325 -0.6 -4.1 fatty acid desaturase compare
ABIE51_RS14545 -0.6 -3.2 Arc family DNA binding domain-containing protein compare
ABIE51_RS17405 -0.6 -3.9 rubredoxin compare
ABIE51_RS07175 -0.6 -2.7 HNH endonuclease signature motif containing protein compare
ABIE51_RS00945 -0.6 -5.4 acyl-CoA desaturase compare
ABIE51_RS02585 -0.6 -1.8 SDR family oxidoreductase compare
ABIE51_RS06105 -0.6 -4.5 OmpA family protein compare
ABIE51_RS09100 -0.6 -4.5 acyl-CoA dehydrogenase family protein compare
ABIE51_RS15510 -0.6 -1.2 transporter associated domain-containing protein compare
ABIE51_RS00235 -0.6 -4.4 2-alkyl-3-oxoalkanoate reductase compare
ABIE51_RS05575 -0.6 -0.7 helix-turn-helix transcriptional regulator compare
ABIE51_RS14120 -0.6 -3.1 peptidyl-prolyl cis-trans isomerase compare
ABIE51_RS10470 -0.6 -3.3 SMP-30/gluconolactonase/LRE family protein compare
ABIE51_RS14060 -0.6 -2.4 MBL fold metallo-hydrolase compare
ABIE51_RS05310 -0.6 -1.2 ABC transporter ATP-binding protein compare
ABIE51_RS16875 -0.6 -1.4 protein phosphatase CheZ compare
ABIE51_RS06600 -0.6 -3.7 rhomboid family intramembrane serine protease compare
ABIE51_RS19105 -0.6 -4.0 pteridine reductase compare
ABIE51_RS01025 -0.6 -3.6 exodeoxyribonuclease V subunit beta compare
ABIE51_RS05615 -0.6 -1.7 proprotein convertase P-domain-containing protein compare
ABIE51_RS15205 -0.6 -1.6 hypothetical protein compare
ABIE51_RS07815 -0.6 -2.9 carbon storage regulator CsrA compare
ABIE51_RS08900 -0.6 -1.6 DUF3011 domain-containing protein compare
ABIE51_RS02910 -0.6 -0.9 (2Fe-2S)-binding protein compare
ABIE51_RS09360 -0.6 -4.6 lipopolysaccharide assembly protein LapB compare
ABIE51_RS12090 -0.6 -1.4 arsenic resistance N-acetyltransferase ArsN2 compare
ABIE51_RS14290 -0.6 -3.4 cation diffusion facilitator family transporter compare
ABIE51_RS07290 -0.6 -1.7 DUF5681 domain-containing protein compare
ABIE51_RS17640 -0.6 -3.8 glycosyltransferase compare
ABIE51_RS15975 -0.6 -2.9 RNase adapter RapZ compare
ABIE51_RS04275 -0.6 -4.5 pyridoxal-phosphate dependent enzyme compare
ABIE51_RS03035 -0.5 -2.5 tyrosine recombinase XerC compare
ABIE51_RS15375 -0.5 -2.6 SDR family NAD(P)-dependent oxidoreductase compare
ABIE51_RS09710 -0.5 -1.2 HlyD family secretion protein compare
ABIE51_RS10490 -0.5 -1.6 serine/threonine protein phosphatase compare
ABIE51_RS05300 -0.5 -2.5 HAMP domain-containing sensor histidine kinase compare
ABIE51_RS11610 -0.5 -1.2 transcription elongation factor GreA compare
ABIE51_RS04690 -0.5 -1.5 penicillin-binding protein activator compare
ABIE51_RS13305 -0.5 -1.2 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
ABIE51_RS01610 -0.5 -3.2 phosphogluconate dehydratase compare
ABIE51_RS06550 -0.5 -3.4 FtsH protease activity modulator HflK compare


Specific Phenotypes

None in this experiment

For Lysobacter sp. OAE881 in stress experiments

For stress 6-Pentyl-2H-pyran-2-one across organisms