Experiment set6S707 for Methanococcus maripaludis JJ

Compare to:

McCas-formate low carbon steel planktonic

200 most important genes:

  gene name fitness t score description  
MMJJ_RS04975 -2.7 -3.2 glycosyltransferase family 4 protein compare
MMJJ_RS09375 -2.4 -2.4 hypothetical protein compare
MMJJ_RS07350 -2.4 -3.9 4Fe-4S binding protein compare
MMJJ_RS05930 -2.1 -2.4 cell division protein SepF compare
MMJJ_RS06750 -1.9 -2.9 homoaconitase large subunit compare
MMJJ_RS06695 -1.8 -2.7 amidohydrolase compare
MMJJ_RS06175 -1.6 -2.8 DUF1743 domain-containing protein compare
MMJJ_RS06240 -1.5 -3.0 dihydropteroate synthase-like protein compare
MMJJ_RS07875 -1.3 -2.6 FAD-dependent oxidoreductase compare
MMJJ_RS05070 -1.3 -1.5 DNA primase catalytic subunit PriS compare
MMJJ_RS07720 -1.3 -2.1 UPF0058 family protein compare
MMJJ_RS00215 -1.3 -1.9 CCA tRNA nucleotidyltransferase compare
MMJJ_RS01360 -1.2 -1.8 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMJJ_RS00210 -1.2 -1.8 DUF530 family protein compare
MMJJ_RS08320 -1.2 -2.1 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
MMJJ_RS08795 -1.2 -2.1 phosphoglucosamine mutase compare
MMJJ_RS03190 -1.1 -2.2 phosphopyruvate hydratase compare
MMJJ_RS06910 -1.1 -1.8 energy-converting NiFe hydrogenase A subunit EhaA compare
MMJJ_RS05610 -1.0 -3.0 CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMJJ_RS03200 -1.0 -1.3 uroporphyrinogen-III synthase compare
MMJJ_RS05620 -1.0 -2.9 CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein compare
MMJJ_RS01355 -1.0 -2.9 UDP-N-acetyl-D-mannosamine dehydrogenase compare
MMJJ_RS00275 -1.0 -1.6 coenzyme F420-0:L-glutamate ligase compare
MMJJ_RS00125 -1.0 -1.6 KEOPS complex subunit Cgi121 compare
MMJJ_RS04770 -1.0 -2.6 formate-dependent phosphoribosylglycinamide formyltransferase compare
MMJJ_RS00360 -1.0 -2.0 adenosylhomocysteinase compare
MMJJ_RS07015 -1.0 -1.6 PFL family protein compare
MMJJ_RS08660 -0.9 -1.7 acetylornithine transaminase compare
MMJJ_RS06040 -0.9 -1.7 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS01880 -0.9 -2.1 RlmE family RNA methyltransferase compare
MMJJ_RS00450 -0.9 -1.4 DUF126 domain-containing protein compare
MMJJ_RS03865 -0.9 -1.1 phosphoribosyl-AMP cyclohydrolase compare
MMJJ_RS07655 -0.9 -7.5 hypothetical protein compare
MMJJ_RS08625 -0.8 -3.3 magnesium/cobalt transporter CorA compare
MMJJ_RS04150 -0.8 -2.4 DUF5379 domain-containing protein compare
MMJJ_RS06880 -0.8 -1.0 EhaG family protein compare
MMJJ_RS06875 -0.8 -1.9 hypothetical protein compare
MMJJ_RS03785 -0.8 -1.8 hypothetical protein compare
MMJJ_RS04985 -0.8 -1.8 glutamyl-tRNA reductase compare
MMJJ_RS04675 -0.8 -3.4 thiamine pyrophosphate-binding protein compare
MMJJ_RS08850 -0.7 -1.1 succinate dehydrogenase/fumarate reductase iron-sulfur subunit compare
MMJJ_RS08330 -0.7 -1.7 SufD family Fe-S cluster assembly protein compare
MMJJ_RS01345 -0.7 -2.5 (5-formylfuran-3-yl)methyl phosphate synthase compare
MMJJ_RS06250 -0.7 -1.7 nicotinamide-nucleotide adenylyltransferase compare
MMJJ_RS08535 -0.7 -1.9 NOL1/NOP2/sun family putative RNA methylase compare
MMJJ_RS05330 -0.7 -1.3 DNA polymerase II large subunit compare
MMJJ_RS03895 -0.7 -1.4 hydrogenase expression/formation protein HypE compare
MMJJ_RS06110 -0.7 -1.5 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC compare
MMJJ_RS03230 -0.7 -1.6 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS03270 -0.7 -1.6 ribosome biogenesis/translation initiation ATPase RLI compare
MMJJ_RS05710 -0.7 -2.0 single-stranded-DNA-specific exonuclease RecJ compare
MMJJ_RS06840 -0.7 -1.7 nickel-dependent hydrogenase large subunit compare
MMJJ_RS05780 -0.6 -2.1 flagellin compare
MMJJ_RS07005 -0.6 -3.1 transcription factor S compare
MMJJ_RS07665 -0.6 -6.0 formate dehydrogenase subunit alpha compare
MMJJ_RS08130 -0.6 -0.9 translation initiation factor IF-2 subunit gamma compare
MMJJ_RS03840 -0.6 -1.5 DHH family phosphoesterase compare
MMJJ_RS09190 -0.6 -1.0 tryptophan synthase subunit beta compare
MMJJ_RS05655 -0.6 -3.2 HisA/HisF family protein compare
MMJJ_RS00570 -0.6 -1.0 ribonuclease P compare
MMJJ_RS06180 -0.6 -1.5 tryptophan--tRNA ligase compare
MMJJ_RS06885 -0.6 -1.5 EhaF family protein compare
MMJJ_RS08810 -0.6 -1.0 DUF4040 domain-containing protein compare
MMJJ_RS06865 -0.6 -1.6 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS07275 -0.6 -1.3 formate--phosphoribosylaminoimidazolecarboxamide ligase compare
MMJJ_RS07670 -0.6 -5.2 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal domain compare
MMJJ_RS08325 -0.6 -1.4 glycosyltransferase family 2 protein compare
MMJJ_RS07470 -0.6 -1.1 50S ribosome-binding GTPase compare
MMJJ_RS07040 -0.6 -0.9 preprotein translocase subunit SecY compare
MMJJ_RS05935 -0.6 -1.1 Era-like GTP-binding protein compare
MMJJ_RS07660 -0.6 -4.6 carbonic anhydrase compare
MMJJ_RS07785 -0.6 -1.2 fumarate reductase subunit A compare
MMJJ_RS01935 -0.6 -1.3 O-phosphoseryl-tRNA(Sec) selenium transferase compare
MMJJ_RS08620 -0.6 -1.6 DUF373 family protein compare
MMJJ_RS04050 -0.6 -1.0 dihydroneopterin aldolase family protein compare
MMJJ_RS02045 -0.5 -1.7 molybdenum cofactor guanylyltransferase compare
MMJJ_RS04360 -0.5 -3.5 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS01475 -0.5 -1.3 signal recognition particle-docking protein FtsY compare
MMJJ_RS00560 -0.5 -1.7 homoisocitrate dehydrogenase compare
MMJJ_RS01200 -0.5 -1.2 PRC-barrel domain-containing protein compare
MMJJ_RS08065 -0.5 -2.4 precorrin-6Y C5,15-methyltransferase (decarboxylating) subunit CbiT compare
MMJJ_RS03160 -0.5 -4.2 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS03820 -0.5 -1.3 hydrogenase formation protein HypD compare
MMJJ_RS06485 -0.5 -1.0 phosphoglycerate kinase compare
MMJJ_RS04475 -0.5 -1.9 3,4-dihydroxy-2-butanone-4-phosphate synthase compare
MMJJ_RS07345 -0.5 -2.1 homocysteine biosynthesis protein compare
MMJJ_RS01750 -0.5 -1.1 ferrous iron transport protein A compare
MMJJ_RS04155 -0.5 -1.7 hypothetical protein compare
MMJJ_RS07950 -0.5 -0.7 4Fe-4S binding protein compare
MMJJ_RS08055 -0.5 -2.0 methanogenesis marker 14 protein compare
MMJJ_RS01600 -0.5 -1.0 radical SAM protein compare
MMJJ_RS01690 -0.4 -1.3 methanogenesis marker 12 protein compare
MMJJ_RS04730 -0.4 -0.7 tyrosine decarboxylase MfnA compare
MMJJ_RS07650 -0.4 -4.1 formate/nitrite transporter family protein compare
MMJJ_RS05360 -0.4 -2.3 nickel-responsive transcriptional regulator NikR compare
MMJJ_RS01830 -0.4 -1.3 tRNA(Ile)(2)-agmatinylcytidine synthase compare
MMJJ_RS03060 -0.4 -0.9 methanogenesis marker 7 protein compare
MMJJ_RS06150 -0.4 -2.3 DUF483 domain-containing protein compare
MMJJ_RS03075 -0.4 -3.5 sodium-dependent transporter compare
MMJJ_RS07995 -0.4 -2.5 molybdenum cofactor biosynthesis protein MoaE compare
MMJJ_RS07415 -0.4 -1.2 polyprenyl diphosphate synthase compare
MMJJ_RS08520 -0.4 -1.4 peptidylprolyl isomerase compare
MMJJ_RS05770 -0.4 -1.0 flagellar protein D compare
MMJJ_RS02275 -0.4 -1.1 nucleotidyltransferase domain-containing protein compare
MMJJ_RS08095 -0.4 -1.4 cobyric acid synthase CobQ compare
MMJJ_RS00355 -0.4 -1.0 ribonuclease P protein component 4 compare
MMJJ_RS05645 -0.4 -1.3 4Fe-4S binding protein compare
MMJJ_RS03540 -0.4 -2.3 TIGR00289 family protein compare
MMJJ_RS08825 -0.4 -2.2 hypothetical protein compare
MMJJ_RS06725 -0.4 -2.8 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMJJ_RS06490 -0.4 -0.5 methanogenesis marker 2 protein compare
MMJJ_RS00615 -0.4 -1.8 nucleoside deaminase compare
MMJJ_RS07165 -0.4 -3.6 chromosome segregation protein SMC compare
MMJJ_RS06700 -0.4 -1.3 L-seryl-tRNA(Sec) kinase compare
MMJJ_RS03115 -0.4 -1.5 sulfopyruvate decarboxylase subunit alpha compare
MMJJ_RS04110 -0.4 -1.8 hypothetical protein compare
MMJJ_RS04200 -0.4 -1.1 triphosphoribosyl-dephospho-CoA synthase compare
MMJJ_RS04970 -0.4 -0.9 DUF655 domain-containing protein compare
MMJJ_RS09035 -0.4 -1.6 OB-fold nucleic acid binding domain-containing protein compare
MMJJ_RS02055 -0.4 -2.9 GTP 3',8-cyclase MoaA compare
MMJJ_RS06565 -0.4 -2.5 segregation/condensation protein A compare
MMJJ_RS03765 -0.4 -1.8 hypothetical protein compare
MMJJ_RS01765 -0.4 -2.9 winged helix-turn-helix domain-containing protein compare
MMJJ_RS06255 -0.4 -1.6 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 compare
MMJJ_RS08230 -0.3 -1.1 ribose-5-phosphate isomerase RpiA compare
MMJJ_RS08005 -0.3 -3.0 formate dehydrogenase accessory sulfurtransferase FdhD compare
MMJJ_RS07815 -0.3 -3.1 2-oxoacid:acceptor oxidoreductase family protein compare
MMJJ_RS08080 -0.3 -1.9 TIGR00300 family protein compare
MMJJ_RS02040 -0.3 -1.1 Asp-tRNA(Asn) amidotransferase subunit GatC compare
MMJJ_RS05540 -0.3 -3.0 LysR family transcriptional regulator compare
MMJJ_RS04010 -0.3 -2.3 archaeal proteasome endopeptidase complex subunit alpha compare
MMJJ_RS04655 -0.3 -1.3 FAD-dependent oxidoreductase compare
MMJJ_RS03310 -0.3 -1.0 hypothetical protein compare
MMJJ_RS02920 -0.3 -0.6 30S ribosomal protein S27ae compare
MMJJ_RS05575 -0.3 -1.0 2-amino-5-formylamino-6-ribosylaminopyrimidin- 4(3H)-one 5'-monophosphate deformylase compare
MMJJ_RS07805 -0.3 -2.4 ferredoxin family protein compare
MMJJ_RS06855 -0.3 -0.5 DUF2104 domain-containing protein compare
MMJJ_RS03225 -0.3 -1.0 4Fe-4S binding protein compare
MMJJ_RS07190 -0.3 -1.0 RtcB family protein compare
MMJJ_RS02035 -0.3 -1.5 4-hydroxy-tetrahydrodipicolinate synthase compare
MMJJ_RS02125 -0.3 -1.7 hypothetical protein compare
MMJJ_RS08865 -0.3 -2.6 class IV adenylate cyclase compare
MMJJ_RS03965 -0.3 -0.8 DNA-directed RNA polymerase subunit L compare
MMJJ_RS04485 -0.3 -1.7 riboflavin synthase compare
MMJJ_RS08010 -0.3 -1.8 phosphoadenosine phosphosulfate reductase family protein compare
MMJJ_RS06340 -0.3 -1.2 coenzyme-B sulfoethylthiotransferase subunit alpha compare
MMJJ_RS04995 -0.3 -1.1 Tfx family DNA-binding protein compare
MMJJ_RS06600 -0.3 -0.9 DUF555 domain-containing protein compare
MMJJ_RS03070 -0.3 -1.4 MetS family NSS transporter small subunit compare
MMJJ_RS08390 -0.3 -0.7 carboxymuconolactone decarboxylase family protein compare
MMJJ_RS03380 -0.3 -1.5 hypothetical protein compare
MMJJ_RS06655 -0.3 -2.4 transcriptional regulator compare
MMJJ_RS04685 -0.3 -1.5 carbamoyltransferase HypF compare
MMJJ_RS05720 -0.3 -0.9 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMJJ_RS07265 -0.3 -2.2 tRNA (adenine-N1)-methyltransferase compare
MMJJ_RS06905 -0.3 -0.7 hypothetical protein compare
MMJJ_RS08340 -0.3 -1.3 archaeoflavoprotein AfpA compare
MMJJ_RS07360 -0.3 -0.6 TIGR00269 family protein compare
MMJJ_RS07810 -0.3 -2.6 3-methyl-2-oxobutanoate dehydrogenase subunit VorB compare
MMJJ_RS02075 -0.3 -1.4 acyl-CoA thioesterase compare
MMJJ_RS06860 -0.3 -1.1 hypothetical protein compare
MMJJ_RS05650 -0.3 -0.5 formylmethanofuran dehydrogenase subunit B compare
MMJJ_RS09135 -0.3 -1.7 archaeosine biosynthesis radical SAM protein RaSEA compare
MMJJ_RS08725 -0.3 -2.4 flippase compare
MMJJ_RS05225 -0.3 -0.5 Gar1/Naf1 family protein compare
MMJJ_RS07825 -0.3 -1.1 YciI family protein compare
MMJJ_RS07935 -0.3 -0.6 protein fwdD compare
MMJJ_RS04800 -0.3 -1.2 2-phospho-L-lactate guanylyltransferase compare
MMJJ_RS08855 -0.3 -0.9 cyclic pyranopterin monophosphate synthase MoaC compare
MMJJ_RS05350 -0.3 -1.5 DUF192 domain-containing protein compare
MMJJ_RS06215 -0.3 -1.0 agmatinase compare
MMJJ_RS05970 -0.3 -0.7 MJ0307 family thioredoxin compare
MMJJ_RS03620 -0.3 -0.9 DUF2097 domain-containing protein compare
MMJJ_RS00220 -0.3 -1.5 UPF0058 family protein compare
MMJJ_RS03445 -0.3 -1.7 hypothetical protein compare
MMJJ_RS07355 -0.3 -1.5 MoaD/ThiS family protein compare
MMJJ_RS06480 -0.3 -2.2 hypothetical protein compare
MMJJ_RS08430 -0.3 -1.5 small nuclear ribonucleoprotein compare
MMJJ_RS05995 -0.3 -0.6 ATP-binding cassette domain-containing protein compare
MMJJ_RS00265 -0.3 -1.4 TIGR02253 family HAD-type hydrolase compare
MMJJ_RS06785 -0.3 -2.0 RNA ligase partner protein compare
MMJJ_RS02000 -0.3 -1.3 AzlD domain-containing protein compare
MMJJ_RS03760 -0.3 -0.7 hydrogenase maturation nickel metallochaperone HypA compare
MMJJ_RS07490 -0.3 -0.6 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMJJ_RS07635 -0.3 -1.8 response regulator transcription factor compare
MMJJ_RS00270 -0.3 -0.7 adenosylcobinamide-GDP ribazoletransferase compare
MMJJ_RS00475 -0.3 -0.8 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
MMJJ_RS05380 -0.3 -0.5 hypothetical protein compare
MMJJ_RS04135 -0.3 -1.4 7-cyano-7-deazaguanine synthase QueC compare
MMJJ_RS07035 -0.2 -0.4 glycosyl transferase compare
MMJJ_RS00550 -0.2 -1.9 AIR synthase-related protein compare
MMJJ_RS00995 -0.2 -1.9 TetR/AcrR family transcriptional regulator compare
MMJJ_RS03430 -0.2 -1.1 winged helix-turn-helix domain-containing protein compare
MMJJ_RS05420 -0.2 -0.7 DNA-directed DNA polymerase II small subunit compare
MMJJ_RS07175 -0.2 -2.2 DEAD/DEAH box helicase compare
MMJJ_RS00180 -0.2 -1.7 DNA topoisomerase I compare
MMJJ_RS00075 -0.2 -2.0 AAA family ATPase compare
MMJJ_RS07725 -0.2 -0.8 DNA primase DnaG compare
MMJJ_RS03125 -0.2 -0.7 GMC oxidoreductase compare
MMJJ_RS07585 -0.2 -1.9 DHH family phosphoesterase compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in attachment assay; planktonic sample experiments