Experiment set6S702 for Methanococcus maripaludis JJ

Compare to:

McCas-formate glass planktonic

200 most important genes:

  gene name fitness t score description  
MMJJ_RS05930 -2.6 -2.6 cell division protein SepF compare
MMJJ_RS06485 -1.9 -2.9 phosphoglycerate kinase compare
MMJJ_RS09190 -1.8 -2.3 tryptophan synthase subunit beta compare
MMJJ_RS03200 -1.7 -1.8 uroporphyrinogen-III synthase compare
MMJJ_RS04970 -1.5 -3.0 DUF655 domain-containing protein compare
MMJJ_RS03840 -1.5 -3.1 DHH family phosphoesterase compare
MMJJ_RS01200 -1.3 -3.0 PRC-barrel domain-containing protein compare
MMJJ_RS07720 -1.3 -2.4 UPF0058 family protein compare
MMJJ_RS05710 -1.2 -4.1 single-stranded-DNA-specific exonuclease RecJ compare
MMJJ_RS06875 -1.2 -1.8 hypothetical protein compare
MMJJ_RS08130 -1.2 -1.6 translation initiation factor IF-2 subunit gamma compare
MMJJ_RS00125 -1.1 -1.9 KEOPS complex subunit Cgi121 compare
MMJJ_RS01360 -1.1 -2.1 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMJJ_RS06510 -1.1 -2.3 LL-diaminopimelate aminotransferase compare
MMJJ_RS06225 -1.1 -1.8 adenosylmethionine decarboxylase compare
MMJJ_RS07655 -1.0 -8.9 hypothetical protein compare
MMJJ_RS03005 -1.0 -2.6 Ni-sirohydrochlorin a,c-diamide reductive cyclase catalytic subunit compare
MMJJ_RS05070 -1.0 -2.0 DNA primase catalytic subunit PriS compare
MMJJ_RS01355 -1.0 -2.4 UDP-N-acetyl-D-mannosamine dehydrogenase compare
MMJJ_RS00580 -1.0 -1.2 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG compare
MMJJ_RS04995 -1.0 -4.3 Tfx family DNA-binding protein compare
MMJJ_RS00275 -1.0 -1.3 coenzyme F420-0:L-glutamate ligase compare
MMJJ_RS08335 -0.9 -1.3 ABC transporter ATP-binding protein compare
MMJJ_RS06250 -0.9 -2.1 nicotinamide-nucleotide adenylyltransferase compare
MMJJ_RS07275 -0.9 -2.2 formate--phosphoribosylaminoimidazolecarboxamide ligase compare
MMJJ_RS05620 -0.9 -2.7 CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein compare
MMJJ_RS03785 -0.9 -1.7 hypothetical protein compare
MMJJ_RS03490 -0.9 -2.2 ribonuclease VapC compare
MMJJ_RS02045 -0.9 -1.8 molybdenum cofactor guanylyltransferase compare
MMJJ_RS03110 -0.8 -1.7 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase compare
MMJJ_RS06750 -0.8 -2.1 homoaconitase large subunit compare
MMJJ_RS04730 -0.8 -2.0 tyrosine decarboxylase MfnA compare
MMJJ_RS01830 -0.8 -2.2 tRNA(Ile)(2)-agmatinylcytidine synthase compare
MMJJ_RS05610 -0.8 -2.2 CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMJJ_RS08095 -0.8 -2.4 cobyric acid synthase CobQ compare
MMJJ_RS06200 -0.8 -2.2 phosphoglycerate dehydrogenase compare
MMJJ_RS07035 -0.8 -1.3 glycosyl transferase compare
MMJJ_RS03815 -0.8 -1.3 nascent polypeptide-associated complex protein compare
MMJJ_RS06175 -0.8 -1.9 DUF1743 domain-containing protein compare
MMJJ_RS04655 -0.8 -3.8 FAD-dependent oxidoreductase compare
MMJJ_RS00210 -0.8 -1.3 DUF530 family protein compare
MMJJ_RS06885 -0.8 -1.6 EhaF family protein compare
MMJJ_RS03190 -0.7 -1.7 phosphopyruvate hydratase compare
MMJJ_RS05935 -0.7 -1.6 Era-like GTP-binding protein compare
MMJJ_RS03055 -0.7 -2.0 hypothetical protein compare
MMJJ_RS03760 -0.7 -1.7 hydrogenase maturation nickel metallochaperone HypA compare
MMJJ_RS04685 -0.7 -3.4 carbamoyltransferase HypF compare
MMJJ_RS06860 -0.7 -2.4 hypothetical protein compare
MMJJ_RS03845 -0.7 -2.1 translation initiation factor IF-2 compare
MMJJ_RS06930 -0.7 -1.5 type II methionyl aminopeptidase compare
MMJJ_RS07950 -0.7 -1.7 4Fe-4S binding protein compare
MMJJ_RS05645 -0.7 -1.6 4Fe-4S binding protein compare
MMJJ_RS08320 -0.7 -1.7 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
MMJJ_RS02920 -0.7 -1.3 30S ribosomal protein S27ae compare
MMJJ_RS06600 -0.7 -1.4 DUF555 domain-containing protein compare
MMJJ_RS00360 -0.7 -1.6 adenosylhomocysteinase compare
MMJJ_RS07190 -0.7 -2.2 RtcB family protein compare
MMJJ_RS07470 -0.7 -1.3 50S ribosome-binding GTPase compare
MMJJ_RS07005 -0.6 -3.2 transcription factor S compare
MMJJ_RS04770 -0.6 -1.6 formate-dependent phosphoribosylglycinamide formyltransferase compare
MMJJ_RS07350 -0.6 -1.3 4Fe-4S binding protein compare
MMJJ_RS07785 -0.6 -1.6 fumarate reductase subunit A compare
MMJJ_RS00450 -0.6 -1.4 DUF126 domain-containing protein compare
MMJJ_RS00355 -0.6 -1.8 ribonuclease P protein component 4 compare
MMJJ_RS07665 -0.6 -5.7 formate dehydrogenase subunit alpha compare
MMJJ_RS02090 -0.6 -2.5 tyramine--L-glutamate ligase compare
MMJJ_RS03540 -0.6 -4.0 TIGR00289 family protein compare
MMJJ_RS08080 -0.6 -3.2 TIGR00300 family protein compare
MMJJ_RS06390 -0.6 -0.8 NADPH-dependent F420 reductase compare
MMJJ_RS03670 -0.6 -1.8 precorrin-2 C(20)-methyltransferase compare
MMJJ_RS05995 -0.6 -1.2 ATP-binding cassette domain-containing protein compare
MMJJ_RS06855 -0.6 -1.2 DUF2104 domain-containing protein compare
MMJJ_RS07670 -0.6 -5.1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal domain compare
MMJJ_RS02040 -0.6 -1.2 Asp-tRNA(Asn) amidotransferase subunit GatC compare
MMJJ_RS02935 -0.5 -1.8 DNA-directed RNA polymerase subunit E'' compare
MMJJ_RS06185 -0.5 -2.3 cobalamin biosynthesis protein compare
MMJJ_RS08625 -0.5 -2.0 magnesium/cobalt transporter CorA compare
MMJJ_RS04790 -0.5 -1.3 biotin--[acetyl-CoA-carboxylase] ligase compare
MMJJ_RS04360 -0.5 -3.7 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS00570 -0.5 -0.7 ribonuclease P compare
MMJJ_RS07715 -0.5 -1.9 UbiD family decarboxylase compare
MMJJ_RS00475 -0.5 -1.6 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
MMJJ_RS08230 -0.5 -1.7 ribose-5-phosphate isomerase RpiA compare
MMJJ_RS06255 -0.5 -2.5 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 compare
MMJJ_RS06110 -0.5 -1.1 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC compare
MMJJ_RS01935 -0.5 -1.6 O-phosphoseryl-tRNA(Sec) selenium transferase compare
MMJJ_RS04980 -0.5 -1.8 bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase compare
MMJJ_RS08535 -0.5 -1.7 NOL1/NOP2/sun family putative RNA methylase compare
MMJJ_RS03160 -0.5 -4.3 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS05720 -0.5 -1.6 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMJJ_RS06905 -0.5 -1.1 hypothetical protein compare
MMJJ_RS07650 -0.5 -4.5 formate/nitrite transporter family protein compare
MMJJ_RS03585 -0.5 -1.0 methanogenesis marker 6 protein compare
MMJJ_RS00560 -0.5 -1.6 homoisocitrate dehydrogenase compare
MMJJ_RS04155 -0.5 -2.2 hypothetical protein compare
MMJJ_RS08660 -0.5 -1.1 acetylornithine transaminase compare
MMJJ_RS08065 -0.5 -1.1 precorrin-6Y C5,15-methyltransferase (decarboxylating) subunit CbiT compare
MMJJ_RS01875 -0.5 -2.6 global nitrogen regulator NrpR compare
MMJJ_RS08470 -0.5 -1.3 ferredoxin family protein compare
MMJJ_RS06705 -0.4 -1.8 bifunctional NADP phosphatase/NAD kinase compare
MMJJ_RS01475 -0.4 -1.1 signal recognition particle-docking protein FtsY compare
MMJJ_RS03820 -0.4 -1.3 hydrogenase formation protein HypD compare
MMJJ_RS04670 -0.4 -1.9 DUF2117 domain-containing protein compare
MMJJ_RS07165 -0.4 -4.1 chromosome segregation protein SMC compare
MMJJ_RS04985 -0.4 -1.2 glutamyl-tRNA reductase compare
MMJJ_RS01755 -0.4 -0.8 ferrous iron transport protein B compare
MMJJ_RS05415 -0.4 -1.0 hypothetical protein compare
MMJJ_RS05445 -0.4 -0.4 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMJJ_RS05420 -0.4 -1.5 DNA-directed DNA polymerase II small subunit compare
MMJJ_RS06725 -0.4 -3.1 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMJJ_RS07660 -0.4 -3.6 carbonic anhydrase compare
MMJJ_RS08005 -0.4 -3.8 formate dehydrogenase accessory sulfurtransferase FdhD compare
MMJJ_RS03270 -0.4 -0.9 ribosome biogenesis/translation initiation ATPase RLI compare
MMJJ_RS04485 -0.4 -2.6 riboflavin synthase compare
MMJJ_RS01345 -0.4 -1.4 (5-formylfuran-3-yl)methyl phosphate synthase compare
MMJJ_RS06380 -0.4 -1.2 signal recognition particle protein Srp54 compare
MMJJ_RS05225 -0.4 -0.8 Gar1/Naf1 family protein compare
MMJJ_RS08850 -0.4 -0.8 succinate dehydrogenase/fumarate reductase iron-sulfur subunit compare
MMJJ_RS03125 -0.4 -1.5 GMC oxidoreductase compare
MMJJ_RS04200 -0.4 -1.6 triphosphoribosyl-dephospho-CoA synthase compare
MMJJ_RS07380 -0.4 -2.3 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMJJ_RS04050 -0.4 -0.8 dihydroneopterin aldolase family protein compare
MMJJ_RS05360 -0.4 -2.4 nickel-responsive transcriptional regulator NikR compare
MMJJ_RS07585 -0.4 -3.1 DHH family phosphoesterase compare
MMJJ_RS05540 -0.4 -3.4 LysR family transcriptional regulator compare
MMJJ_RS03230 -0.4 -1.8 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS06040 -0.4 -1.2 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS08865 -0.4 -3.1 class IV adenylate cyclase compare
MMJJ_RS00180 -0.4 -2.7 DNA topoisomerase I compare
MMJJ_RS07490 -0.4 -0.9 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMJJ_RS04475 -0.4 -1.3 3,4-dihydroxy-2-butanone-4-phosphate synthase compare
MMJJ_RS06820 -0.4 -1.7 CBS domain-containing protein compare
MMJJ_RS03660 -0.4 -1.3 DUF447 family protein compare
MMJJ_RS07970 -0.3 -0.9 O-phospho-L-seryl-tRNA:Cys-tRNA synthase compare
MMJJ_RS04110 -0.3 -2.0 hypothetical protein compare
MMJJ_RS01415 -0.3 -0.7 beta-CASP ribonuclease aCPSF1 compare
MMJJ_RS01960 -0.3 -2.3 glycosyltransferase family 2 protein compare
MMJJ_RS08000 -0.3 -2.6 HesA/MoeB/ThiF family protein compare
MMJJ_RS07810 -0.3 -2.9 3-methyl-2-oxobutanoate dehydrogenase subunit VorB compare
MMJJ_RS07815 -0.3 -3.0 2-oxoacid:acceptor oxidoreductase family protein compare
MMJJ_RS08825 -0.3 -2.5 hypothetical protein compare
MMJJ_RS08055 -0.3 -1.6 methanogenesis marker 14 protein compare
MMJJ_RS01690 -0.3 -1.1 methanogenesis marker 12 protein compare
MMJJ_RS02275 -0.3 -0.9 nucleotidyltransferase domain-containing protein compare
MMJJ_RS04615 -0.3 -1.5 methanogenesis marker 3 protein compare
MMJJ_RS06540 -0.3 -1.6 DUF2120 domain-containing protein compare
MMJJ_RS02035 -0.3 -1.8 4-hydroxy-tetrahydrodipicolinate synthase compare
MMJJ_RS06375 -0.3 -1.6 UbiX family flavin prenyltransferase compare
MMJJ_RS02190 -0.3 -2.9 molybdopterin biosynthesis protein compare
MMJJ_RS07185 -0.3 -1.0 DUF371 domain-containing protein compare
MMJJ_RS08380 -0.3 -1.0 hypothetical protein compare
MMJJ_RS06050 -0.3 -2.6 molybdopterin molybdotransferase MoeA compare
MMJJ_RS08840 -0.3 -1.2 calcium/sodium antiporter compare
MMJJ_RS09135 -0.3 -1.9 archaeosine biosynthesis radical SAM protein RaSEA compare
MMJJ_RS05535 -0.3 -2.3 hypothetical protein compare
MMJJ_RS09375 -0.3 -0.7 hypothetical protein compare
MMJJ_RS08330 -0.3 -0.6 SufD family Fe-S cluster assembly protein compare
MMJJ_RS03605 -0.3 -1.5 TIGR00297 family protein compare
MMJJ_RS08340 -0.3 -0.9 archaeoflavoprotein AfpA compare
MMJJ_RS01350 -0.3 -1.5 sodium:proton antiporter compare
MMJJ_RS06565 -0.3 -2.0 segregation/condensation protein A compare
MMJJ_RS06215 -0.3 -1.3 agmatinase compare
MMJJ_RS09365 -0.3 -1.5 hypothetical protein compare
MMJJ_RS08725 -0.3 -2.5 flippase compare
MMJJ_RS01975 -0.3 -2.3 diphthine synthase compare
MMJJ_RS06915 -0.3 -2.4 helix-turn-helix domain-containing protein compare
MMJJ_RS09035 -0.3 -1.7 OB-fold nucleic acid binding domain-containing protein compare
MMJJ_RS08010 -0.3 -1.6 phosphoadenosine phosphosulfate reductase family protein compare
MMJJ_RS07175 -0.3 -2.6 DEAD/DEAH box helicase compare
MMJJ_RS05655 -0.3 -1.6 HisA/HisF family protein compare
MMJJ_RS03150 -0.3 -1.3 2-phospho-L-lactate transferase compare
MMJJ_RS08710 -0.3 -2.2 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMJJ_RS04650 -0.3 -1.2 nitrogenase iron protein compare
MMJJ_RS08795 -0.3 -0.8 phosphoglucosamine mutase compare
MMJJ_RS05295 -0.3 -1.9 cobyrinic acid a,c-diamide synthase compare
MMJJ_RS06240 -0.3 -0.8 dihydropteroate synthase-like protein compare
MMJJ_RS04135 -0.3 -1.5 7-cyano-7-deazaguanine synthase QueC compare
MMJJ_RS06210 -0.3 -2.2 hypothetical protein compare
MMJJ_RS02665 -0.3 -1.4 methyl-accepting chemotaxis protein compare
MMJJ_RS08810 -0.3 -0.5 DUF4040 domain-containing protein compare
MMJJ_RS04150 -0.3 -0.8 DUF5379 domain-containing protein compare
MMJJ_RS06865 -0.3 -0.9 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS04800 -0.3 -1.2 2-phospho-L-lactate guanylyltransferase compare
MMJJ_RS08870 -0.3 -0.5 2-isopropylmalate synthase compare
MMJJ_RS06700 -0.3 -1.1 L-seryl-tRNA(Sec) kinase compare
MMJJ_RS01880 -0.3 -0.7 RlmE family RNA methyltransferase compare
MMJJ_RS05915 -0.3 -1.5 multiprotein bridging factor aMBF1 compare
MMJJ_RS00385 -0.3 -1.7 TIGR00454 family protein compare
MMJJ_RS07410 -0.2 -0.8 methanogenesis marker protein Mmp4/MtxX compare
MMJJ_RS00550 -0.2 -1.9 AIR synthase-related protein compare
MMJJ_RS04675 -0.2 -1.2 thiamine pyrophosphate-binding protein compare
MMJJ_RS07355 -0.2 -1.6 MoaD/ThiS family protein compare
MMJJ_RS03075 -0.2 -2.0 sodium-dependent transporter compare
MMJJ_RS06840 -0.2 -0.6 nickel-dependent hydrogenase large subunit compare
MMJJ_RS08805 -0.2 -1.6 deoxyuridine 5'-triphosphate nucleotidohydrolase compare
MMJJ_RS02055 -0.2 -1.9 GTP 3',8-cyclase MoaA compare
MMJJ_RS06910 -0.2 -0.5 energy-converting NiFe hydrogenase A subunit EhaA compare
MMJJ_RS01070 -0.2 -0.5 PadR family transcriptional regulator compare
MMJJ_RS07805 -0.2 -1.8 ferredoxin family protein compare
MMJJ_RS06480 -0.2 -2.1 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in attachment assay; planktonic sample experiments