Experiment set6S701 for Methanococcus maripaludis JJ

Compare to:

McCas-formate glass planktonic

200 most important genes:

  gene name fitness t score description  
MMJJ_RS03840 -2.5 -4.1 DHH family phosphoesterase compare
MMJJ_RS05930 -1.9 -2.6 cell division protein SepF compare
MMJJ_RS04050 -1.5 -1.7 dihydroneopterin aldolase family protein compare
MMJJ_RS07275 -1.4 -2.7 formate--phosphoribosylaminoimidazolecarboxamide ligase compare
MMJJ_RS00270 -1.4 -3.3 adenosylcobinamide-GDP ribazoletransferase compare
MMJJ_RS06840 -1.4 -3.4 nickel-dependent hydrogenase large subunit compare
MMJJ_RS04975 -1.3 -2.0 glycosyltransferase family 4 protein compare
MMJJ_RS05330 -1.3 -2.1 DNA polymerase II large subunit compare
MMJJ_RS08795 -1.3 -2.3 phosphoglucosamine mutase compare
MMJJ_RS01600 -1.2 -2.4 radical SAM protein compare
MMJJ_RS00125 -1.2 -2.4 KEOPS complex subunit Cgi121 compare
MMJJ_RS00370 -1.2 -1.1 asparagine synthase (glutamine-hydrolyzing) compare
MMJJ_RS03580 -1.2 -2.5 TIGR00303 family protein compare
MMJJ_RS05380 -1.2 -1.4 hypothetical protein compare
MMJJ_RS07655 -1.1 -9.6 hypothetical protein compare
MMJJ_RS03785 -1.1 -2.3 hypothetical protein compare
MMJJ_RS01355 -1.1 -2.9 UDP-N-acetyl-D-mannosamine dehydrogenase compare
MMJJ_RS00275 -1.1 -1.9 coenzyme F420-0:L-glutamate ligase compare
MMJJ_RS00450 -1.0 -2.0 DUF126 domain-containing protein compare
MMJJ_RS03270 -1.0 -2.1 ribosome biogenesis/translation initiation ATPase RLI compare
MMJJ_RS05995 -1.0 -1.8 ATP-binding cassette domain-containing protein compare
MMJJ_RS05935 -1.0 -1.5 Era-like GTP-binding protein compare
MMJJ_RS03660 -1.0 -2.8 DUF447 family protein compare
MMJJ_RS05710 -1.0 -3.3 single-stranded-DNA-specific exonuclease RecJ compare
MMJJ_RS07875 -1.0 -2.3 FAD-dependent oxidoreductase compare
MMJJ_RS07470 -0.9 -1.3 50S ribosome-binding GTPase compare
MMJJ_RS06510 -0.9 -1.8 LL-diaminopimelate aminotransferase compare
MMJJ_RS06885 -0.9 -1.6 EhaF family protein compare
MMJJ_RS08320 -0.9 -1.7 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
MMJJ_RS07950 -0.9 -2.1 4Fe-4S binding protein compare
MMJJ_RS08155 -0.8 -2.9 cobalt-precorrin-5B (C(1))-methyltransferase CbiD compare
MMJJ_RS03615 -0.8 -1.6 cobalt-precorrin-8 methylmutase compare
MMJJ_RS09120 -0.8 -1.2 aspartate kinase compare
MMJJ_RS08330 -0.8 -2.3 SufD family Fe-S cluster assembly protein compare
MMJJ_RS08095 -0.8 -2.6 cobyric acid synthase CobQ compare
MMJJ_RS04685 -0.8 -4.0 carbamoyltransferase HypF compare
MMJJ_RS08130 -0.7 -1.2 translation initiation factor IF-2 subunit gamma compare
MMJJ_RS08230 -0.7 -2.3 ribose-5-phosphate isomerase RpiA compare
MMJJ_RS06215 -0.7 -2.2 agmatinase compare
MMJJ_RS07000 -0.7 -1.5 TrkH family potassium uptake protein compare
MMJJ_RS05420 -0.7 -1.2 DNA-directed DNA polymerase II small subunit compare
MMJJ_RS05620 -0.7 -2.2 CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein compare
MMJJ_RS05765 -0.7 -1.4 flagellar protein E compare
MMJJ_RS08080 -0.7 -4.0 TIGR00300 family protein compare
MMJJ_RS04155 -0.7 -3.2 hypothetical protein compare
MMJJ_RS04770 -0.7 -2.5 formate-dependent phosphoribosylglycinamide formyltransferase compare
MMJJ_RS07410 -0.7 -2.5 methanogenesis marker protein Mmp4/MtxX compare
MMJJ_RS06910 -0.7 -1.6 energy-converting NiFe hydrogenase A subunit EhaA compare
MMJJ_RS04655 -0.7 -3.4 FAD-dependent oxidoreductase compare
MMJJ_RS08065 -0.6 -3.4 precorrin-6Y C5,15-methyltransferase (decarboxylating) subunit CbiT compare
MMJJ_RS07360 -0.6 -1.4 TIGR00269 family protein compare
MMJJ_RS01870 -0.6 -1.1 methanogenesis marker 15 protein compare
MMJJ_RS06930 -0.6 -1.4 type II methionyl aminopeptidase compare
MMJJ_RS03820 -0.6 -1.5 hydrogenase formation protein HypD compare
MMJJ_RS06240 -0.6 -1.8 dihydropteroate synthase-like protein compare
MMJJ_RS06600 -0.6 -1.9 DUF555 domain-containing protein compare
MMJJ_RS03810 -0.6 -2.1 AIR synthase-related protein compare
MMJJ_RS07665 -0.6 -5.8 formate dehydrogenase subunit alpha compare
MMJJ_RS07005 -0.6 -3.3 transcription factor S compare
MMJJ_RS05950 -0.6 -1.6 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
MMJJ_RS07670 -0.6 -5.4 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal domain compare
MMJJ_RS03865 -0.6 -0.7 phosphoribosyl-AMP cyclohydrolase compare
MMJJ_RS07505 -0.6 -1.0 DNA-directed RNA polymerase subunit K compare
MMJJ_RS05645 -0.6 -1.4 4Fe-4S binding protein compare
MMJJ_RS06180 -0.6 -1.5 tryptophan--tRNA ligase compare
MMJJ_RS06695 -0.6 -1.3 amidohydrolase compare
MMJJ_RS08840 -0.6 -2.0 calcium/sodium antiporter compare
MMJJ_RS00550 -0.6 -4.1 AIR synthase-related protein compare
MMJJ_RS07035 -0.5 -1.0 glycosyl transferase compare
MMJJ_RS04475 -0.5 -2.6 3,4-dihydroxy-2-butanone-4-phosphate synthase compare
MMJJ_RS01960 -0.5 -3.2 glycosyltransferase family 2 protein compare
MMJJ_RS09130 -0.5 -1.2 NFYB/HAP3 family transcription factor subunit compare
MMJJ_RS04360 -0.5 -4.1 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS03845 -0.5 -1.4 translation initiation factor IF-2 compare
MMJJ_RS03110 -0.5 -1.2 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase compare
MMJJ_RS04615 -0.5 -1.8 methanogenesis marker 3 protein compare
MMJJ_RS02920 -0.5 -0.9 30S ribosomal protein S27ae compare
MMJJ_RS04200 -0.5 -1.5 triphosphoribosyl-dephospho-CoA synthase compare
MMJJ_RS06855 -0.5 -1.3 DUF2104 domain-containing protein compare
MMJJ_RS04995 -0.5 -2.2 Tfx family DNA-binding protein compare
MMJJ_RS02045 -0.5 -1.1 molybdenum cofactor guanylyltransferase compare
MMJJ_RS08855 -0.5 -1.9 cyclic pyranopterin monophosphate synthase MoaC compare
MMJJ_RS08625 -0.5 -2.5 magnesium/cobalt transporter CorA compare
MMJJ_RS04520 -0.5 -1.7 coenzyme F430 synthase compare
MMJJ_RS05610 -0.5 -1.8 CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMJJ_RS00570 -0.5 -0.9 ribonuclease P compare
MMJJ_RS06865 -0.5 -1.6 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS06750 -0.5 -1.1 homoaconitase large subunit compare
MMJJ_RS07660 -0.5 -3.6 carbonic anhydrase compare
MMJJ_RS00180 -0.5 -3.4 DNA topoisomerase I compare
MMJJ_RS01875 -0.5 -2.1 global nitrogen regulator NrpR compare
MMJJ_RS05575 -0.5 -1.6 2-amino-5-formylamino-6-ribosylaminopyrimidin- 4(3H)-one 5'-monophosphate deformylase compare
MMJJ_RS03225 -0.5 -1.6 4Fe-4S binding protein compare
MMJJ_RS09035 -0.5 -2.3 OB-fold nucleic acid binding domain-containing protein compare
MMJJ_RS06255 -0.5 -2.2 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 compare
MMJJ_RS08725 -0.5 -3.8 flippase compare
MMJJ_RS07650 -0.4 -4.1 formate/nitrite transporter family protein compare
MMJJ_RS01360 -0.4 -1.1 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMJJ_RS05655 -0.4 -2.0 HisA/HisF family protein compare
MMJJ_RS07350 -0.4 -1.3 4Fe-4S binding protein compare
MMJJ_RS05360 -0.4 -2.9 nickel-responsive transcriptional regulator NikR compare
MMJJ_RS01880 -0.4 -1.4 RlmE family RNA methyltransferase compare
MMJJ_RS03875 -0.4 -1.5 CBS domain-containing protein compare
MMJJ_RS07720 -0.4 -1.0 UPF0058 family protein compare
MMJJ_RS04110 -0.4 -2.1 hypothetical protein compare
MMJJ_RS01200 -0.4 -0.7 PRC-barrel domain-containing protein compare
MMJJ_RS06725 -0.4 -3.2 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMJJ_RS07165 -0.4 -3.9 chromosome segregation protein SMC compare
MMJJ_RS05770 -0.4 -1.2 flagellar protein D compare
MMJJ_RS02055 -0.4 -3.3 GTP 3',8-cyclase MoaA compare
MMJJ_RS01410 -0.4 -2.4 archaeal proteasome endopeptidase complex subunit beta compare
MMJJ_RS04970 -0.4 -1.0 DUF655 domain-containing protein compare
MMJJ_RS05540 -0.4 -3.5 LysR family transcriptional regulator compare
MMJJ_RS03670 -0.4 -1.3 precorrin-2 C(20)-methyltransferase compare
MMJJ_RS03095 -0.4 -1.2 bifunctional N(6)-L-threonylcarbamoyladenine synthase/serine/threonine protein kinase compare
MMJJ_RS06700 -0.4 -1.7 L-seryl-tRNA(Sec) kinase compare
MMJJ_RS07785 -0.4 -1.1 fumarate reductase subunit A compare
MMJJ_RS08005 -0.4 -3.6 formate dehydrogenase accessory sulfurtransferase FdhD compare
MMJJ_RS08500 -0.4 -2.3 L-sulfolactate dehydrogenase compare
MMJJ_RS04135 -0.4 -2.1 7-cyano-7-deazaguanine synthase QueC compare
MMJJ_RS01690 -0.4 -1.3 methanogenesis marker 12 protein compare
MMJJ_RS03815 -0.4 -1.0 nascent polypeptide-associated complex protein compare
MMJJ_RS03895 -0.4 -1.1 hydrogenase expression/formation protein HypE compare
MMJJ_RS06390 -0.4 -0.7 NADPH-dependent F420 reductase compare
MMJJ_RS02275 -0.4 -1.7 nucleotidyltransferase domain-containing protein compare
MMJJ_RS07935 -0.4 -1.3 protein fwdD compare
MMJJ_RS00360 -0.4 -1.2 adenosylhomocysteinase compare
MMJJ_RS07945 -0.4 -1.0 4Fe-4S binding protein compare
MMJJ_RS03160 -0.4 -3.2 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS07585 -0.4 -2.7 DHH family phosphoesterase compare
MMJJ_RS07355 -0.4 -2.1 MoaD/ThiS family protein compare
MMJJ_RS05445 -0.4 -0.6 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMJJ_RS00440 -0.4 -3.2 selenide, water dikinase SelD compare
MMJJ_RS04565 -0.4 -1.3 sirohydrochlorin nickelochelatase compare
MMJJ_RS03490 -0.4 -0.7 ribonuclease VapC compare
MMJJ_RS07265 -0.4 -2.6 tRNA (adenine-N1)-methyltransferase compare
MMJJ_RS03185 -0.4 -0.6 alanine--tRNA ligase compare
MMJJ_RS05280 -0.3 -0.5 hypothetical protein compare
MMJJ_RS02190 -0.3 -3.1 molybdopterin biosynthesis protein compare
MMJJ_RS03540 -0.3 -2.0 TIGR00289 family protein compare
MMJJ_RS00475 -0.3 -1.0 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
MMJJ_RS06860 -0.3 -1.4 hypothetical protein compare
MMJJ_RS03170 -0.3 -1.9 DUF5612 domain-containing protein compare
MMJJ_RS03200 -0.3 -0.6 uroporphyrinogen-III synthase compare
MMJJ_RS03310 -0.3 -1.5 hypothetical protein compare
MMJJ_RS03430 -0.3 -1.2 winged helix-turn-helix domain-containing protein compare
MMJJ_RS03650 -0.3 -2.0 class I SAM-dependent methyltransferase family protein compare
MMJJ_RS06880 -0.3 -0.7 EhaG family protein compare
MMJJ_RS02035 -0.3 -2.0 4-hydroxy-tetrahydrodipicolinate synthase compare
MMJJ_RS09405 -0.3 -1.4 hypothetical protein compare
MMJJ_RS06155 -0.3 -1.3 phosphatidylglycerophosphatase A compare
MMJJ_RS00560 -0.3 -1.2 homoisocitrate dehydrogenase compare
MMJJ_RS03075 -0.3 -2.7 sodium-dependent transporter compare
MMJJ_RS02935 -0.3 -1.7 DNA-directed RNA polymerase subunit E'' compare
MMJJ_RS01765 -0.3 -2.4 winged helix-turn-helix domain-containing protein compare
MMJJ_RS08825 -0.3 -1.9 hypothetical protein compare
MMJJ_RS03245 -0.3 -0.6 UMP kinase compare
MMJJ_RS05490 -0.3 -0.7 imidazole glycerol phosphate synthase subunit HisF compare
MMJJ_RS06915 -0.3 -2.7 helix-turn-helix domain-containing protein compare
MMJJ_RS05725 -0.3 -2.7 UPF0179 family protein compare
MMJJ_RS08340 -0.3 -1.2 archaeoflavoprotein AfpA compare
MMJJ_RS03230 -0.3 -1.4 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS08805 -0.3 -2.1 deoxyuridine 5'-triphosphate nucleotidohydrolase compare
MMJJ_RS08000 -0.3 -2.5 HesA/MoeB/ThiF family protein compare
MMJJ_RS08830 -0.3 -1.8 hypothetical protein compare
MMJJ_RS06565 -0.3 -2.2 segregation/condensation protein A compare
MMJJ_RS09300 -0.3 -1.0 hypothetical protein compare
MMJJ_RS06925 -0.3 -1.1 GMP synthase subunit A compare
MMJJ_RS00355 -0.3 -0.7 ribonuclease P protein component 4 compare
MMJJ_RS01860 -0.3 -2.4 tRNA guanosine(15) transglycosylase TgtA compare
MMJJ_RS07995 -0.3 -1.7 molybdenum cofactor biosynthesis protein MoaE compare
MMJJ_RS07805 -0.3 -1.9 ferredoxin family protein compare
MMJJ_RS06175 -0.3 -0.8 DUF1743 domain-containing protein compare
MMJJ_RS05590 -0.3 -0.6 homoserine dehydrogenase compare
MMJJ_RS05720 -0.3 -0.8 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMJJ_RS05295 -0.3 -1.9 cobyrinic acid a,c-diamide synthase compare
MMJJ_RS04150 -0.3 -0.9 DUF5379 domain-containing protein compare
MMJJ_RS05915 -0.3 -2.0 multiprotein bridging factor aMBF1 compare
MMJJ_RS07015 -0.3 -0.4 PFL family protein compare
MMJJ_RS03760 -0.3 -0.8 hydrogenase maturation nickel metallochaperone HypA compare
MMJJ_RS06755 -0.3 -2.4 diadenylate cyclase compare
MMJJ_RS06050 -0.3 -2.1 molybdopterin molybdotransferase MoeA compare
MMJJ_RS01785 -0.3 -0.7 50S ribosomal protein L14e compare
MMJJ_RS08490 -0.3 -1.4 rubrerythrin family protein compare
MMJJ_RS01975 -0.3 -1.9 diphthine synthase compare
MMJJ_RS08850 -0.3 -0.7 succinate dehydrogenase/fumarate reductase iron-sulfur subunit compare
MMJJ_RS07345 -0.3 -1.3 homocysteine biosynthesis protein compare
MMJJ_RS07245 -0.3 -1.2 amidohydrolase family protein compare
MMJJ_RS08865 -0.3 -2.1 class IV adenylate cyclase compare
MMJJ_RS00995 -0.3 -2.3 TetR/AcrR family transcriptional regulator compare
MMJJ_RS08010 -0.3 -1.4 phosphoadenosine phosphosulfate reductase family protein compare
MMJJ_RS06705 -0.3 -0.9 bifunctional NADP phosphatase/NAD kinase compare
MMJJ_RS00265 -0.3 -1.6 TIGR02253 family HAD-type hydrolase compare
MMJJ_RS06480 -0.3 -2.3 hypothetical protein compare
MMJJ_RS01935 -0.3 -0.5 O-phosphoseryl-tRNA(Sec) selenium transferase compare
MMJJ_RS01500 -0.3 -1.8 transcriptional regulator compare
MMJJ_RS06785 -0.3 -1.7 RNA ligase partner protein compare
MMJJ_RS07635 -0.2 -1.9 response regulator transcription factor compare
MMJJ_RS09375 -0.2 -0.5 hypothetical protein compare
MMJJ_RS04485 -0.2 -1.8 riboflavin synthase compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in attachment assay; planktonic sample experiments