Experiment set6S697 for Methanococcus maripaludis JJ

Compare to:

McCas low carbon steel planktonic

200 most important genes:

  gene name fitness t score description  
MMJJ_RS03200 -1.5 -2.1 uroporphyrinogen-III synthase compare
MMJJ_RS06855 -1.2 -1.6 DUF2104 domain-containing protein compare
MMJJ_RS07350 -1.2 -2.9 4Fe-4S binding protein compare
MMJJ_RS07875 -1.2 -2.3 FAD-dependent oxidoreductase compare
MMJJ_RS08535 -1.2 -2.7 NOL1/NOP2/sun family putative RNA methylase compare
MMJJ_RS05935 -1.1 -1.6 Era-like GTP-binding protein compare
MMJJ_RS00210 -1.1 -2.0 DUF530 family protein compare
MMJJ_RS03865 -0.9 -1.2 phosphoribosyl-AMP cyclohydrolase compare
MMJJ_RS05930 -0.9 -1.2 cell division protein SepF compare
MMJJ_RS06225 -0.9 -1.6 adenosylmethionine decarboxylase compare
MMJJ_RS03190 -0.9 -1.2 phosphopyruvate hydratase compare
MMJJ_RS05720 -0.8 -2.0 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMJJ_RS07785 -0.7 -1.7 fumarate reductase subunit A compare
MMJJ_RS03615 -0.7 -1.5 cobalt-precorrin-8 methylmutase compare
MMJJ_RS07035 -0.6 -2.1 glycosyl transferase compare
MMJJ_RS00125 -0.6 -1.3 KEOPS complex subunit Cgi121 compare
MMJJ_RS08795 -0.6 -1.1 phosphoglucosamine mutase compare
MMJJ_RS08870 -0.6 -1.0 2-isopropylmalate synthase compare
MMJJ_RS06880 -0.6 -0.8 EhaG family protein compare
MMJJ_RS03965 -0.5 -1.1 DNA-directed RNA polymerase subunit L compare
MMJJ_RS01815 -0.5 -2.3 DUF134 domain-containing protein compare
MMJJ_RS06175 -0.5 -1.5 DUF1743 domain-containing protein compare
MMJJ_RS07415 -0.5 -1.0 polyprenyl diphosphate synthase compare
MMJJ_RS00275 -0.5 -0.7 coenzyme F420-0:L-glutamate ligase compare
MMJJ_RS06215 -0.5 -1.5 agmatinase compare
MMJJ_RS05330 -0.4 -0.8 DNA polymerase II large subunit compare
MMJJ_RS08625 -0.4 -1.6 magnesium/cobalt transporter CorA compare
MMJJ_RS05610 -0.4 -1.2 CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMJJ_RS06865 -0.4 -0.9 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS06910 -0.4 -0.9 energy-converting NiFe hydrogenase A subunit EhaA compare
MMJJ_RS00570 -0.4 -1.0 ribonuclease P compare
MMJJ_RS01755 -0.4 -0.7 ferrous iron transport protein B compare
MMJJ_RS09190 -0.4 -0.6 tryptophan synthase subunit beta compare
MMJJ_RS07950 -0.4 -1.0 4Fe-4S binding protein compare
MMJJ_RS05575 -0.4 -1.4 2-amino-5-formylamino-6-ribosylaminopyrimidin- 4(3H)-one 5'-monophosphate deformylase compare
MMJJ_RS01355 -0.4 -1.1 UDP-N-acetyl-D-mannosamine dehydrogenase compare
MMJJ_RS03820 -0.4 -0.9 hydrogenase formation protein HypD compare
MMJJ_RS00370 -0.4 -0.7 asparagine synthase (glutamine-hydrolyzing) compare
MMJJ_RS08810 -0.4 -0.7 DUF4040 domain-containing protein compare
MMJJ_RS05915 -0.3 -1.8 multiprotein bridging factor aMBF1 compare
MMJJ_RS03095 -0.3 -1.0 bifunctional N(6)-L-threonylcarbamoyladenine synthase/serine/threonine protein kinase compare
MMJJ_RS07360 -0.3 -0.8 TIGR00269 family protein compare
MMJJ_RS07275 -0.3 -1.0 formate--phosphoribosylaminoimidazolecarboxamide ligase compare
MMJJ_RS09375 -0.3 -0.8 hypothetical protein compare
MMJJ_RS04770 -0.3 -1.0 formate-dependent phosphoribosylglycinamide formyltransferase compare
MMJJ_RS04565 -0.3 -1.1 sirohydrochlorin nickelochelatase compare
MMJJ_RS04700 -0.3 -1.3 deoxyhypusine synthase compare
MMJJ_RS04875 -0.3 -0.9 tRNA-Lys compare
MMJJ_RS04135 -0.3 -2.2 7-cyano-7-deazaguanine synthase QueC compare
MMJJ_RS03840 -0.3 -0.9 DHH family phosphoesterase compare
MMJJ_RS05070 -0.3 -0.6 DNA primase catalytic subunit PriS compare
MMJJ_RS06000 -0.3 -1.2 cation:proton antiporter subunit C compare
MMJJ_RS08330 -0.3 -0.8 SufD family Fe-S cluster assembly protein compare
MMJJ_RS01750 -0.3 -0.5 ferrous iron transport protein A compare
MMJJ_RS06600 -0.3 -0.7 DUF555 domain-containing protein compare
MMJJ_RS01200 -0.3 -0.7 PRC-barrel domain-containing protein compare
MMJJ_RS06255 -0.3 -1.3 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 compare
MMJJ_RS07265 -0.3 -2.0 tRNA (adenine-N1)-methyltransferase compare
MMJJ_RS07190 -0.3 -1.0 RtcB family protein compare
MMJJ_RS08155 -0.3 -0.8 cobalt-precorrin-5B (C(1))-methyltransferase CbiD compare
MMJJ_RS03875 -0.3 -0.9 CBS domain-containing protein compare
MMJJ_RS01690 -0.3 -0.8 methanogenesis marker 12 protein compare
MMJJ_RS05165 -0.3 -1.9 class I SAM-dependent methyltransferase compare
MMJJ_RS06510 -0.2 -0.3 LL-diaminopimelate aminotransferase compare
MMJJ_RS01830 -0.2 -0.8 tRNA(Ile)(2)-agmatinylcytidine synthase compare
MMJJ_RS08230 -0.2 -0.6 ribose-5-phosphate isomerase RpiA compare
MMJJ_RS01475 -0.2 -0.5 signal recognition particle-docking protein FtsY compare
MMJJ_RS06240 -0.2 -0.5 dihydropteroate synthase-like protein compare
MMJJ_RS04970 -0.2 -0.4 DUF655 domain-containing protein compare
MMJJ_RS04985 -0.2 -0.6 glutamyl-tRNA reductase compare
MMJJ_RS03490 -0.2 -0.7 ribonuclease VapC compare
MMJJ_RS08190 -0.2 -0.9 hypothetical protein compare
MMJJ_RS01405 -0.2 -0.6 proline--tRNA ligase compare
MMJJ_RS01975 -0.2 -1.6 diphthine synthase compare
MMJJ_RS09230 -0.2 -1.3 hypothetical protein compare
MMJJ_RS01360 -0.2 -0.5 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMJJ_RS08725 -0.2 -1.8 flippase compare
MMJJ_RS08065 -0.2 -0.8 precorrin-6Y C5,15-methyltransferase (decarboxylating) subunit CbiT compare
MMJJ_RS06925 -0.2 -0.8 GMP synthase subunit A compare
MMJJ_RS04270 -0.2 -1.5 DUF364 domain-containing protein compare
MMJJ_RS09300 -0.2 -1.0 hypothetical protein compare
MMJJ_RS04670 -0.2 -0.9 DUF2117 domain-containing protein compare
MMJJ_RS05870 -0.2 -0.9 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMJJ_RS07720 -0.2 -0.5 UPF0058 family protein compare
MMJJ_RS04150 -0.2 -0.6 DUF5379 domain-containing protein compare
MMJJ_RS05710 -0.2 -1.0 single-stranded-DNA-specific exonuclease RecJ compare
MMJJ_RS06930 -0.2 -0.5 type II methionyl aminopeptidase compare
MMJJ_RS08710 -0.2 -1.5 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMJJ_RS03815 -0.2 -0.5 nascent polypeptide-associated complex protein compare
MMJJ_RS02090 -0.2 -0.7 tyramine--L-glutamate ligase compare
MMJJ_RS08370 -0.2 -1.0 hypothetical protein compare
MMJJ_RS01865 -0.2 -0.7 peptidyl-tRNA hydrolase Pth2 compare
MMJJ_RS01395 -0.2 -1.2 DUF1894 domain-containing protein compare
MMJJ_RS09035 -0.2 -1.0 OB-fold nucleic acid binding domain-containing protein compare
MMJJ_RS08825 -0.2 -1.0 hypothetical protein compare
MMJJ_RS07995 -0.2 -0.9 molybdenum cofactor biosynthesis protein MoaE compare
MMJJ_RS07655 -0.2 -1.6 hypothetical protein compare
MMJJ_RS09405 -0.2 -1.0 hypothetical protein compare
MMJJ_RS06755 -0.2 -1.6 diadenylate cyclase compare
MMJJ_RS03690 -0.2 -1.1 indolepyruvate oxidoreductase subunit beta compare
MMJJ_RS08080 -0.2 -1.1 TIGR00300 family protein compare
MMJJ_RS06220 -0.2 -0.8 polyamine aminopropyltransferase compare
MMJJ_RS03070 -0.2 -0.8 MetS family NSS transporter small subunit compare
MMJJ_RS02035 -0.2 -1.1 4-hydroxy-tetrahydrodipicolinate synthase compare
MMJJ_RS03250 -0.2 -0.6 DUF2116 family Zn-ribbon domain-containing protein compare
MMJJ_RS08720 -0.2 -1.5 UDP-glucose/GDP-mannose dehydrogenase family protein compare
MMJJ_RS09380 -0.2 -0.7 hypothetical protein compare
MMJJ_RS08500 -0.2 -1.0 L-sulfolactate dehydrogenase compare
MMJJ_RS05995 -0.2 -0.4 ATP-binding cassette domain-containing protein compare
MMJJ_RS03245 -0.2 -0.4 UMP kinase compare
MMJJ_RS06165 -0.2 -1.2 archaeosine synthase subunit alpha compare
MMJJ_RS04975 -0.2 -0.4 glycosyltransferase family 4 protein compare
MMJJ_RS05780 -0.2 -0.4 flagellin compare
MMJJ_RS08615 -0.2 -1.1 oligosaccharide repeat unit polymerase family protein compare
MMJJ_RS04765 -0.1 -1.1 metal-dependent hydrolase compare
MMJJ_RS08660 -0.1 -0.4 acetylornithine transaminase compare
MMJJ_RS02885 -0.1 -0.9 NifB/NifX family molybdenum-iron cluster-binding protein compare
MMJJ_RS08400 -0.1 -0.7 CoB--CoM heterodisulfide reductase subunit C compare
MMJJ_RS05770 -0.1 -0.3 flagellar protein D compare
MMJJ_RS04625 -0.1 -1.3 SLC13 family permease compare
MMJJ_RS06290 -0.1 -1.1 DUF749 domain-containing protein compare
MMJJ_RS00050 -0.1 -1.0 AAA family ATPase compare
MMJJ_RS03410 -0.1 -1.0 hypothetical protein compare
MMJJ_RS08855 -0.1 -0.5 cyclic pyranopterin monophosphate synthase MoaC compare
MMJJ_RS08470 -0.1 -0.7 ferredoxin family protein compare
MMJJ_RS00385 -0.1 -1.0 TIGR00454 family protein compare
MMJJ_RS00550 -0.1 -1.1 AIR synthase-related protein compare
MMJJ_RS03590 -0.1 -1.0 restriction endonuclease compare
MMJJ_RS06075 -0.1 -1.2 DNA-binding protein Alba compare
MMJJ_RS03905 -0.1 -1.0 ATP-binding cassette domain-containing protein compare
MMJJ_RS01850 -0.1 -1.1 RNA 2',3'-cyclic phosphodiesterase compare
MMJJ_RS02000 -0.1 -0.9 AzlD domain-containing protein compare
MMJJ_RS04615 -0.1 -0.6 methanogenesis marker 3 protein compare
MMJJ_RS00460 -0.1 -1.0 selenouridine synthase SelU-like subunit compare
MMJJ_RS06975 -0.1 -0.9 protein translocase SEC61 complex subunit gamma compare
MMJJ_RS06560 -0.1 -1.2 site-2 protease family protein compare
MMJJ_RS07970 -0.1 -0.3 O-phospho-L-seryl-tRNA:Cys-tRNA synthase compare
MMJJ_RS09370 -0.1 -0.8 heavy-metal-associated domain-containing protein compare
MMJJ_RS06995 -0.1 -1.0 2-phosphoglycerate kinase compare
MMJJ_RS00950 -0.1 -1.0 DUF111 family protein compare
MMJJ_RS06785 -0.1 -0.9 RNA ligase partner protein compare
MMJJ_RS04450 -0.1 -1.1 diphthamide biosynthesis enzyme Dph2 compare
MMJJ_RS07715 -0.1 -0.4 UbiD family decarboxylase compare
MMJJ_RS03270 -0.1 -0.3 ribosome biogenesis/translation initiation ATPase RLI compare
MMJJ_RS06005 -0.1 -0.8 energy conserving hydrogenase EhbF compare
MMJJ_RS06675 -0.1 -1.1 TIGR01212 family radical SAM protein compare
MMJJ_RS09245 -0.1 -1.0 hypothetical protein compare
MMJJ_RS00095 -0.1 -1.0 permease compare
MMJJ_RS07935 -0.1 -0.3 protein fwdD compare
MMJJ_RS05900 -0.1 -1.1 ATP-binding cassette domain-containing protein compare
MMJJ_RS06050 -0.1 -0.9 molybdopterin molybdotransferase MoeA compare
MMJJ_RS08025 -0.1 -0.6 hypothetical protein compare
MMJJ_RS01730 -0.1 -1.0 ABC transporter permease compare
MMJJ_RS08055 -0.1 -0.5 methanogenesis marker 14 protein compare
MMJJ_RS01150 -0.1 -0.6 hypothetical protein compare
MMJJ_RS00075 -0.1 -0.9 AAA family ATPase compare
MMJJ_RS08830 -0.1 -0.6 hypothetical protein compare
MMJJ_RS04340 -0.1 -0.8 hypothetical protein compare
MMJJ_RS01940 -0.1 -0.9 hypothetical protein compare
MMJJ_RS07355 -0.1 -0.7 MoaD/ThiS family protein compare
MMJJ_RS07765 -0.1 -0.7 DMT family protein compare
MMJJ_RS06375 -0.1 -0.6 UbiX family flavin prenyltransferase compare
MMJJ_RS08490 -0.1 -0.8 rubrerythrin family protein compare
MMJJ_RS00830 -0.1 -0.9 corrinoid protein compare
MMJJ_RS07725 -0.1 -0.4 DNA primase DnaG compare
MMJJ_RS00415 -0.1 -0.7 DedA family protein compare
MMJJ_RS07500 -0.1 -1.0 hypothetical protein compare
MMJJ_RS00135 -0.1 -0.9 FmdE family protein compare
MMJJ_RS06660 -0.1 -0.8 DUF1188 domain-containing protein compare
MMJJ_RS05160 -0.1 -0.2 RNA-binding protein compare
MMJJ_RS06110 -0.1 -0.3 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC compare
MMJJ_RS03850 -0.1 -0.8 nucleoside-diphosphate kinase compare
MMJJ_RS06735 -0.1 -0.9 cobalt ECF transporter T component CbiQ compare
MMJJ_RS00675 -0.1 -1.0 nitrogenase compare
MMJJ_RS08840 -0.1 -0.4 calcium/sodium antiporter compare
MMJJ_RS06480 -0.1 -0.9 hypothetical protein compare
MMJJ_RS00960 -0.1 -0.8 flavodoxin family protein compare
MMJJ_RS00315 -0.1 -0.9 methyl-accepting chemotaxis protein compare
MMJJ_RS04190 -0.1 -0.9 hypothetical protein compare
MMJJ_RS01070 -0.1 -0.4 PadR family transcriptional regulator compare
MMJJ_RS04815 -0.1 -0.8 TIM barrel protein compare
MMJJ_RS08195 -0.1 -0.8 DUF4186 domain-containing protein compare
MMJJ_RS04730 -0.1 -0.3 tyrosine decarboxylase MfnA compare
MMJJ_RS05380 -0.1 -0.2 hypothetical protein compare
MMJJ_RS00065 -0.1 -0.9 4Fe-4S dicluster domain-containing protein compare
MMJJ_RS09090 -0.1 -0.8 TetR/AcrR family transcriptional regulator compare
MMJJ_RS06280 -0.1 -0.9 hypothetical protein compare
MMJJ_RS07165 -0.1 -0.9 chromosome segregation protein SMC compare
MMJJ_RS03845 -0.1 -0.4 translation initiation factor IF-2 compare
MMJJ_RS01465 -0.1 -0.8 METTL5 family protein compare
MMJJ_RS05675 -0.1 -0.9 RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5 compare
MMJJ_RS06640 -0.1 -0.8 YfcE family phosphodiesterase compare
MMJJ_RS03495 -0.1 -0.8 hypothetical protein compare
MMJJ_RS04795 -0.1 -0.9 MBL fold metallo-hydrolase compare
MMJJ_RS04010 -0.1 -0.8 archaeal proteasome endopeptidase complex subunit alpha compare
MMJJ_RS07965 -0.1 -0.7 hypothetical protein compare
MMJJ_RS02915 -0.1 -0.7 hypothetical protein compare
MMJJ_RS03345 -0.1 -0.7 hypothetical protein compare
MMJJ_RS00475 -0.1 -0.2 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
MMJJ_RS02875 -0.1 -0.9 site-2 protease family protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in attachment assay; planktonic sample experiments