Experiment set6S692 for Methanococcus maripaludis JJ

Compare to:

McCas-formate low carbon steel attached

200 most important genes:

  gene name fitness t score description  
MMJJ_RS08850 -4.1 -2.4 succinate dehydrogenase/fumarate reductase iron-sulfur subunit compare
MMJJ_RS06225 -4.0 -2.2 adenosylmethionine decarboxylase compare
MMJJ_RS05930 -3.8 -2.7 cell division protein SepF compare
MMJJ_RS00355 -3.5 -3.3 ribonuclease P protein component 4 compare
MMJJ_RS00125 -3.4 -2.9 KEOPS complex subunit Cgi121 compare
MMJJ_RS06905 -3.3 -2.8 hypothetical protein compare
MMJJ_RS07015 -3.3 -2.6 PFL family protein compare
MMJJ_RS01355 -3.2 -4.4 UDP-N-acetyl-D-mannosamine dehydrogenase compare
MMJJ_RS02045 -3.1 -3.1 molybdenum cofactor guanylyltransferase compare
MMJJ_RS04730 -3.0 -3.5 tyrosine decarboxylase MfnA compare
MMJJ_RS03055 -2.9 -2.0 hypothetical protein compare
MMJJ_RS09375 -2.9 -1.8 hypothetical protein compare
MMJJ_RS05950 -2.8 -2.8 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
MMJJ_RS07275 -2.8 -3.2 formate--phosphoribosylaminoimidazolecarboxamide ligase compare
MMJJ_RS03005 -2.8 -3.7 Ni-sirohydrochlorin a,c-diamide reductive cyclase catalytic subunit compare
MMJJ_RS03200 -2.7 -1.9 uroporphyrinogen-III synthase compare
MMJJ_RS03615 -2.6 -2.5 cobalt-precorrin-8 methylmutase compare
MMJJ_RS06250 -2.6 -2.3 nicotinamide-nucleotide adenylyltransferase compare
MMJJ_RS07350 -2.6 -3.2 4Fe-4S binding protein compare
MMJJ_RS03895 -2.6 -2.5 hydrogenase expression/formation protein HypE compare
MMJJ_RS03840 -2.6 -3.8 DHH family phosphoesterase compare
MMJJ_RS01475 -2.5 -1.9 signal recognition particle-docking protein FtsY compare
MMJJ_RS01750 -2.5 -2.8 ferrous iron transport protein A compare
MMJJ_RS05780 -2.5 -3.5 flagellin compare
MMJJ_RS07720 -2.5 -1.6 UPF0058 family protein compare
MMJJ_RS05810 -2.4 -5.5 precorrin-4 C(11)-methyltransferase compare
MMJJ_RS06240 -2.4 -2.0 dihydropteroate synthase-like protein compare
MMJJ_RS09130 -2.2 -1.5 NFYB/HAP3 family transcription factor subunit compare
MMJJ_RS08095 -2.2 -2.6 cobyric acid synthase CobQ compare
MMJJ_RS06875 -2.2 -2.4 hypothetical protein compare
MMJJ_RS05445 -2.1 -1.3 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMJJ_RS05620 -2.1 -3.6 CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein compare
MMJJ_RS06700 -2.1 -3.7 L-seryl-tRNA(Sec) kinase compare
MMJJ_RS01360 -2.1 -2.1 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMJJ_RS05070 -2.1 -2.2 DNA primase catalytic subunit PriS compare
MMJJ_RS00430 -2.0 -2.6 ribonuclease Z compare
MMJJ_RS03670 -2.0 -3.6 precorrin-2 C(20)-methyltransferase compare
MMJJ_RS06695 -2.0 -2.0 amidohydrolase compare
MMJJ_RS06380 -2.0 -3.2 signal recognition particle protein Srp54 compare
MMJJ_RS06625 -1.9 -1.7 pyruvate synthase subunit PorB compare
MMJJ_RS06930 -1.9 -2.0 type II methionyl aminopeptidase compare
MMJJ_RS06255 -1.9 -5.4 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 compare
MMJJ_RS04200 -1.9 -3.7 triphosphoribosyl-dephospho-CoA synthase compare
MMJJ_RS05490 -1.8 -2.0 imidazole glycerol phosphate synthase subunit HisF compare
MMJJ_RS06180 -1.7 -2.2 tryptophan--tRNA ligase compare
MMJJ_RS01200 -1.7 -1.9 PRC-barrel domain-containing protein compare
MMJJ_RS04670 -1.7 -3.4 DUF2117 domain-containing protein compare
MMJJ_RS05575 -1.7 -3.7 2-amino-5-formylamino-6-ribosylaminopyrimidin- 4(3H)-one 5'-monophosphate deformylase compare
MMJJ_RS03865 -1.6 -0.9 phosphoribosyl-AMP cyclohydrolase compare
MMJJ_RS04675 -1.6 -3.8 thiamine pyrophosphate-binding protein compare
MMJJ_RS06485 -1.6 -1.6 phosphoglycerate kinase compare
MMJJ_RS03095 -1.6 -1.9 bifunctional N(6)-L-threonylcarbamoyladenine synthase/serine/threonine protein kinase compare
MMJJ_RS05770 -1.6 -1.8 flagellar protein D compare
MMJJ_RS01345 -1.6 -3.5 (5-formylfuran-3-yl)methyl phosphate synthase compare
MMJJ_RS02090 -1.6 -3.4 tyramine--L-glutamate ligase compare
MMJJ_RS03820 -1.6 -2.1 hydrogenase formation protein HypD compare
MMJJ_RS05765 -1.5 -1.3 flagellar protein E compare
MMJJ_RS07960 -1.5 -1.4 quinolinate synthase NadA compare
MMJJ_RS06155 -1.4 -2.8 phosphatidylglycerophosphatase A compare
MMJJ_RS00370 -1.4 -1.5 asparagine synthase (glutamine-hydrolyzing) compare
MMJJ_RS04985 -1.4 -2.5 glutamyl-tRNA reductase compare
MMJJ_RS08660 -1.4 -1.6 acetylornithine transaminase compare
MMJJ_RS03995 -1.4 -3.5 PHP domain-containing protein compare
MMJJ_RS06110 -1.4 -1.2 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC compare
MMJJ_RS00475 -1.4 -1.8 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
MMJJ_RS07035 -1.3 -1.3 glycosyl transferase compare
MMJJ_RS07640 -1.3 -11.2 cache domain-containing protein compare
MMJJ_RS03225 -1.3 -1.8 4Fe-4S binding protein compare
MMJJ_RS04975 -1.3 -1.1 glycosyltransferase family 4 protein compare
MMJJ_RS05330 -1.3 -1.4 DNA polymerase II large subunit compare
MMJJ_RS09190 -1.3 -1.1 tryptophan synthase subunit beta compare
MMJJ_RS06910 -1.2 -1.9 energy-converting NiFe hydrogenase A subunit EhaA compare
MMJJ_RS06885 -1.2 -1.6 EhaF family protein compare
MMJJ_RS09120 -1.2 -1.8 aspartate kinase compare
MMJJ_RS06750 -1.2 -1.8 homoaconitase large subunit compare
MMJJ_RS06575 -1.2 -2.1 prephenate dehydrogenase compare
MMJJ_RS03760 -1.2 -1.5 hydrogenase maturation nickel metallochaperone HypA compare
MMJJ_RS01870 -1.2 -1.1 methanogenesis marker 15 protein compare
MMJJ_RS08725 -1.2 -7.3 flippase compare
MMJJ_RS05295 -1.2 -4.7 cobyrinic acid a,c-diamide synthase compare
MMJJ_RS04155 -1.2 -3.0 hypothetical protein compare
MMJJ_RS08855 -1.2 -2.4 cyclic pyranopterin monophosphate synthase MoaC compare
MMJJ_RS06840 -1.2 -2.4 nickel-dependent hydrogenase large subunit compare
MMJJ_RS06705 -1.2 -2.3 bifunctional NADP phosphatase/NAD kinase compare
MMJJ_RS03125 -1.1 -2.2 GMC oxidoreductase compare
MMJJ_RS09035 -1.1 -2.5 OB-fold nucleic acid binding domain-containing protein compare
MMJJ_RS05260 -1.1 -2.4 ATP-grasp domain-containing protein compare
MMJJ_RS03580 -1.1 -1.4 TIGR00303 family protein compare
MMJJ_RS07635 -1.1 -5.9 response regulator transcription factor compare
MMJJ_RS08055 -1.1 -2.8 methanogenesis marker 14 protein compare
MMJJ_RS03270 -1.1 -1.4 ribosome biogenesis/translation initiation ATPase RLI compare
MMJJ_RS07725 -1.1 -3.2 DNA primase DnaG compare
MMJJ_RS05065 -1.1 -1.9 (4-{4-[2-(gamma-L- glutamylamino)ethyl]phenoxymethyl}furan-2-yl)methanamine synthase compare
MMJJ_RS01690 -1.1 -2.0 methanogenesis marker 12 protein compare
MMJJ_RS04770 -1.1 -1.6 formate-dependent phosphoribosylglycinamide formyltransferase compare
MMJJ_RS06390 -1.0 -0.8 NADPH-dependent F420 reductase compare
MMJJ_RS06340 -1.0 -2.4 coenzyme-B sulfoethylthiotransferase subunit alpha compare
MMJJ_RS08330 -1.0 -1.2 SufD family Fe-S cluster assembly protein compare
MMJJ_RS06375 -1.0 -2.1 UbiX family flavin prenyltransferase compare
MMJJ_RS01935 -1.0 -1.5 O-phosphoseryl-tRNA(Sec) selenium transferase compare
MMJJ_RS01755 -1.0 -1.3 ferrous iron transport protein B compare
MMJJ_RS08080 -1.0 -3.4 TIGR00300 family protein compare
MMJJ_RS04520 -1.0 -2.2 coenzyme F430 synthase compare
MMJJ_RS08340 -1.0 -2.3 archaeoflavoprotein AfpA compare
MMJJ_RS05820 -1.0 -5.4 DUF2304 domain-containing protein compare
MMJJ_RS04980 -1.0 -1.9 bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase compare
MMJJ_RS04685 -0.9 -3.0 carbamoyltransferase HypF compare
MMJJ_RS06185 -0.9 -2.2 cobalamin biosynthesis protein compare
MMJJ_RS01810 -0.9 -0.8 methyl coenzyme M reductase system, component A2 compare
MMJJ_RS05790 -0.9 -5.1 flagellin compare
MMJJ_RS08000 -0.9 -4.7 HesA/MoeB/ThiF family protein compare
MMJJ_RS05740 -0.9 -7.2 archaellar assembly protein FlaJ compare
MMJJ_RS05750 -0.9 -6.2 flagellar accessory protein FlaH compare
MMJJ_RS07415 -0.9 -1.3 polyprenyl diphosphate synthase compare
MMJJ_RS07785 -0.9 -0.8 fumarate reductase subunit A compare
MMJJ_RS08155 -0.9 -1.8 cobalt-precorrin-5B (C(1))-methyltransferase CbiD compare
MMJJ_RS06865 -0.9 -1.5 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS05760 -0.9 -6.5 flagellar protein F compare
MMJJ_RS05655 -0.9 -2.8 HisA/HisF family protein compare
MMJJ_RS06510 -0.9 -0.9 LL-diaminopimelate aminotransferase compare
MMJJ_RS05645 -0.8 -1.7 4Fe-4S binding protein compare
MMJJ_RS08710 -0.8 -4.2 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMJJ_RS03650 -0.8 -2.1 class I SAM-dependent methyltransferase family protein compare
MMJJ_RS09175 -0.8 -0.7 anthranilate synthase component I compare
MMJJ_RS08615 -0.8 -3.9 oligosaccharide repeat unit polymerase family protein compare
MMJJ_RS05510 -0.8 -6.0 archaellum operon transcriptional activator EarA family protein compare
MMJJ_RS06175 -0.8 -0.9 DUF1743 domain-containing protein compare
MMJJ_RS04150 -0.8 -1.3 DUF5379 domain-containing protein compare
MMJJ_RS03785 -0.8 -1.6 hypothetical protein compare
MMJJ_RS04565 -0.8 -1.4 sirohydrochlorin nickelochelatase compare
MMJJ_RS05420 -0.8 -1.5 DNA-directed DNA polymerase II small subunit compare
MMJJ_RS02140 -0.8 -4.8 preflagellin peptidase FlaK compare
MMJJ_RS03150 -0.8 -2.1 2-phospho-L-lactate transferase compare
MMJJ_RS06725 -0.8 -3.9 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMJJ_RS05590 -0.8 -0.6 homoserine dehydrogenase compare
MMJJ_RS03295 -0.8 -4.3 PHP domain-containing protein compare
MMJJ_RS07840 -0.8 -1.4 Glu-tRNA(Gln) amidotransferase subunit GatD compare
MMJJ_RS05755 -0.7 -5.3 flagellar protein G compare
MMJJ_RS08925 -0.7 -4.3 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS07410 -0.7 -1.6 methanogenesis marker protein Mmp4/MtxX compare
MMJJ_RS08720 -0.7 -5.6 UDP-glucose/GDP-mannose dehydrogenase family protein compare
MMJJ_RS08840 -0.7 -1.4 calcium/sodium antiporter compare
MMJJ_RS08715 -0.7 -4.0 NAD-dependent epimerase/dehydratase family protein compare
MMJJ_RS01880 -0.7 -1.2 RlmE family RNA methyltransferase compare
MMJJ_RS06860 -0.7 -1.6 hypothetical protein compare
MMJJ_RS00270 -0.7 -1.1 adenosylcobinamide-GDP ribazoletransferase compare
MMJJ_RS05745 -0.7 -6.0 type II/IV secretion system ATPase subunit compare
MMJJ_RS00180 -0.7 -3.1 DNA topoisomerase I compare
MMJJ_RS04620 -0.7 -1.3 homocitrate synthase family protein compare
MMJJ_RS05995 -0.7 -0.6 ATP-binding cassette domain-containing protein compare
MMJJ_RS05720 -0.7 -0.6 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMJJ_RS02275 -0.7 -1.6 nucleotidyltransferase domain-containing protein compare
MMJJ_RS08750 -0.7 -5.5 glycosyltransferase compare
MMJJ_RS07655 -0.7 -5.3 hypothetical protein compare
MMJJ_RS08325 -0.7 -1.0 glycosyltransferase family 2 protein compare
MMJJ_RS01830 -0.7 -0.9 tRNA(Ile)(2)-agmatinylcytidine synthase compare
MMJJ_RS03160 -0.7 -4.6 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS07030 -0.7 -5.6 hypothetical protein compare
MMJJ_RS07355 -0.6 -3.0 MoaD/ThiS family protein compare
MMJJ_RS08785 -0.6 -3.5 D-sedoheptulose 7-phosphate isomerase compare
MMJJ_RS05710 -0.6 -1.6 single-stranded-DNA-specific exonuclease RecJ compare
MMJJ_RS07165 -0.6 -5.2 chromosome segregation protein SMC compare
MMJJ_RS07455 -0.6 -1.8 coenzyme F420-reducing hydrogenase, FrhD protein compare
MMJJ_RS07945 -0.6 -0.7 4Fe-4S binding protein compare
MMJJ_RS08730 -0.6 -4.8 glycosyltransferase family 4 protein compare
MMJJ_RS03810 -0.6 -1.1 AIR synthase-related protein compare
MMJJ_RS05380 -0.6 -0.7 hypothetical protein compare
MMJJ_RS05610 -0.6 -1.2 CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMJJ_RS07375 -0.6 -2.5 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMJJ_RS06940 -0.6 -3.7 metalloregulator ArsR/SmtB family transcription factor compare
MMJJ_RS05540 -0.6 -4.4 LysR family transcriptional regulator compare
MMJJ_RS04475 -0.6 -1.1 3,4-dihydroxy-2-butanone-4-phosphate synthase compare
MMJJ_RS06040 -0.6 -1.3 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS05595 -0.6 -1.0 hypothetical protein compare
MMJJ_RS07680 -0.6 -3.4 glucose-6-phosphate isomerase compare
MMJJ_RS07670 -0.6 -4.6 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal domain compare
MMJJ_RS07155 -0.6 -2.6 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMJJ_RS00265 -0.6 -2.4 TIGR02253 family HAD-type hydrolase compare
MMJJ_RS01915 -0.6 -3.1 precorrin-6A reductase compare
MMJJ_RS04650 -0.6 -1.3 nitrogenase iron protein compare
MMJJ_RS05505 -0.6 -5.4 hypothetical protein compare
MMJJ_RS06880 -0.6 -0.4 EhaG family protein compare
MMJJ_RS08760 -0.6 -4.2 glycosyltransferase family 9 protein compare
MMJJ_RS04615 -0.5 -1.3 methanogenesis marker 3 protein compare
MMJJ_RS04040 -0.5 -1.9 prefoldin subunit beta compare
MMJJ_RS07190 -0.5 -1.2 RtcB family protein compare
MMJJ_RS08190 -0.5 -1.0 hypothetical protein compare
MMJJ_RS06800 -0.5 -3.4 prefoldin subunit alpha compare
MMJJ_RS08770 -0.5 -3.4 HAD family hydrolase compare
MMJJ_RS08470 -0.5 -0.5 ferredoxin family protein compare
MMJJ_RS08810 -0.5 -0.5 DUF4040 domain-containing protein compare
MMJJ_RS03190 -0.5 -0.7 phosphopyruvate hydratase compare
MMJJ_RS02055 -0.5 -2.9 GTP 3',8-cyclase MoaA compare
MMJJ_RS08765 -0.5 -4.1 glycosyltransferase family 9 protein compare
MMJJ_RS03965 -0.5 -0.7 DNA-directed RNA polymerase subunit L compare
MMJJ_RS00600 -0.5 -0.8 hydroxymethylbilane synthase compare
MMJJ_RS04360 -0.5 -3.9 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS00560 -0.5 -1.0 homoisocitrate dehydrogenase compare
MMJJ_RS04995 -0.5 -1.4 Tfx family DNA-binding protein compare
MMJJ_RS05360 -0.5 -2.2 nickel-responsive transcriptional regulator NikR compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in attachment assay; attached sample experiments