Experiment set6S691 for Methanococcus maripaludis JJ

Compare to:

McCas-formate low carbon steel attached

200 most important genes:

  gene name fitness t score description  
MMJJ_RS06390 -4.2 -2.6 NADPH-dependent F420 reductase compare
MMJJ_RS06485 -4.1 -2.6 phosphoglycerate kinase compare
MMJJ_RS01935 -3.9 -3.7 O-phosphoseryl-tRNA(Sec) selenium transferase compare
MMJJ_RS05995 -3.7 -2.7 ATP-binding cassette domain-containing protein compare
MMJJ_RS09175 -3.6 -1.2 anthranilate synthase component I compare
MMJJ_RS00450 -3.5 -2.6 DUF126 domain-containing protein compare
MMJJ_RS03060 -3.3 -3.3 methanogenesis marker 7 protein compare
MMJJ_RS00275 -3.2 -2.2 coenzyme F420-0:L-glutamate ligase compare
MMJJ_RS09190 -3.2 -2.0 tryptophan synthase subunit beta compare
MMJJ_RS05620 -3.2 -4.8 CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein compare
MMJJ_RS01880 -2.8 -3.3 RlmE family RNA methyltransferase compare
MMJJ_RS06250 -2.7 -2.8 nicotinamide-nucleotide adenylyltransferase compare
MMJJ_RS04155 -2.6 -5.3 hypothetical protein compare
MMJJ_RS07275 -2.6 -3.2 formate--phosphoribosylaminoimidazolecarboxamide ligase compare
MMJJ_RS06875 -2.5 -2.4 hypothetical protein compare
MMJJ_RS03055 -2.5 -1.8 hypothetical protein compare
MMJJ_RS03615 -2.4 -2.5 cobalt-precorrin-8 methylmutase compare
MMJJ_RS04730 -2.3 -2.7 tyrosine decarboxylase MfnA compare
MMJJ_RS03965 -2.3 -1.9 DNA-directed RNA polymerase subunit L compare
MMJJ_RS07350 -2.2 -2.8 4Fe-4S binding protein compare
MMJJ_RS06175 -2.2 -1.9 DUF1743 domain-containing protein compare
MMJJ_RS04200 -2.1 -3.7 triphosphoribosyl-dephospho-CoA synthase compare
MMJJ_RS07000 -2.1 -1.4 TrkH family potassium uptake protein compare
MMJJ_RS04050 -2.0 -1.5 dihydroneopterin aldolase family protein compare
MMJJ_RS08330 -2.0 -2.5 SufD family Fe-S cluster assembly protein compare
MMJJ_RS01200 -2.0 -2.6 PRC-barrel domain-containing protein compare
MMJJ_RS06600 -2.0 -1.7 DUF555 domain-containing protein compare
MMJJ_RS00475 -1.9 -2.5 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
MMJJ_RS06180 -1.9 -2.3 tryptophan--tRNA ligase compare
MMJJ_RS06110 -1.8 -1.8 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC compare
MMJJ_RS08850 -1.8 -1.9 succinate dehydrogenase/fumarate reductase iron-sulfur subunit compare
MMJJ_RS06855 -1.8 -1.5 DUF2104 domain-containing protein compare
MMJJ_RS01755 -1.8 -1.9 ferrous iron transport protein B compare
MMJJ_RS06930 -1.7 -1.8 type II methionyl aminopeptidase compare
MMJJ_RS00125 -1.7 -1.7 KEOPS complex subunit Cgi121 compare
MMJJ_RS08795 -1.7 -2.1 phosphoglucosamine mutase compare
MMJJ_RS03110 -1.7 -2.3 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase compare
MMJJ_RS08055 -1.7 -5.1 methanogenesis marker 14 protein compare
MMJJ_RS01355 -1.7 -2.6 UDP-N-acetyl-D-mannosamine dehydrogenase compare
MMJJ_RS01690 -1.7 -2.0 methanogenesis marker 12 protein compare
MMJJ_RS01870 -1.6 -1.4 methanogenesis marker 15 protein compare
MMJJ_RS06910 -1.6 -2.0 energy-converting NiFe hydrogenase A subunit EhaA compare
MMJJ_RS08625 -1.6 -4.2 magnesium/cobalt transporter CorA compare
MMJJ_RS07410 -1.6 -3.1 methanogenesis marker protein Mmp4/MtxX compare
MMJJ_RS08095 -1.6 -2.3 cobyric acid synthase CobQ compare
MMJJ_RS06625 -1.6 -1.3 pyruvate synthase subunit PorB compare
MMJJ_RS02090 -1.5 -3.9 tyramine--L-glutamate ligase compare
MMJJ_RS04670 -1.5 -2.7 DUF2117 domain-containing protein compare
MMJJ_RS03670 -1.5 -2.7 precorrin-2 C(20)-methyltransferase compare
MMJJ_RS05720 -1.5 -1.8 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMJJ_RS03125 -1.5 -2.2 GMC oxidoreductase compare
MMJJ_RS05330 -1.5 -1.5 DNA polymerase II large subunit compare
MMJJ_RS07360 -1.5 -1.3 TIGR00269 family protein compare
MMJJ_RS05610 -1.4 -2.5 CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMJJ_RS05930 -1.4 -1.3 cell division protein SepF compare
MMJJ_RS06225 -1.4 -1.4 adenosylmethionine decarboxylase compare
MMJJ_RS08725 -1.4 -8.8 flippase compare
MMJJ_RS08155 -1.4 -1.9 cobalt-precorrin-5B (C(1))-methyltransferase CbiD compare
MMJJ_RS04615 -1.4 -3.1 methanogenesis marker 3 protein compare
MMJJ_RS01350 -1.4 -3.2 sodium:proton antiporter compare
MMJJ_RS04650 -1.4 -3.9 nitrogenase iron protein compare
MMJJ_RS06700 -1.3 -2.4 L-seryl-tRNA(Sec) kinase compare
MMJJ_RS05445 -1.3 -1.2 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMJJ_RS06885 -1.3 -1.4 EhaF family protein compare
MMJJ_RS07415 -1.3 -2.1 polyprenyl diphosphate synthase compare
MMJJ_RS01810 -1.3 -1.7 methyl coenzyme M reductase system, component A2 compare
MMJJ_RS07950 -1.3 -1.6 4Fe-4S binding protein compare
MMJJ_RS06840 -1.3 -2.0 nickel-dependent hydrogenase large subunit compare
MMJJ_RS05710 -1.2 -2.3 single-stranded-DNA-specific exonuclease RecJ compare
MMJJ_RS06155 -1.2 -2.4 phosphatidylglycerophosphatase A compare
MMJJ_RS08870 -1.2 -1.0 2-isopropylmalate synthase compare
MMJJ_RS05650 -1.2 -1.3 formylmethanofuran dehydrogenase subunit B compare
MMJJ_RS04985 -1.2 -1.8 glutamyl-tRNA reductase compare
MMJJ_RS05260 -1.2 -2.9 ATP-grasp domain-containing protein compare
MMJJ_RS03760 -1.2 -1.7 hydrogenase maturation nickel metallochaperone HypA compare
MMJJ_RS05770 -1.2 -1.2 flagellar protein D compare
MMJJ_RS00360 -1.2 -1.8 adenosylhomocysteinase compare
MMJJ_RS07840 -1.2 -1.5 Glu-tRNA(Gln) amidotransferase subunit GatD compare
MMJJ_RS06380 -1.2 -2.3 signal recognition particle protein Srp54 compare
MMJJ_RS03620 -1.2 -2.4 DUF2097 domain-containing protein compare
MMJJ_RS08190 -1.1 -2.7 hypothetical protein compare
MMJJ_RS05295 -1.1 -4.4 cobyrinic acid a,c-diamide synthase compare
MMJJ_RS02920 -1.1 -1.2 30S ribosomal protein S27ae compare
MMJJ_RS07640 -1.1 -9.8 cache domain-containing protein compare
MMJJ_RS06490 -1.1 -1.1 methanogenesis marker 2 protein compare
MMJJ_RS06185 -1.1 -2.6 cobalamin biosynthesis protein compare
MMJJ_RS07635 -1.1 -7.6 response regulator transcription factor compare
MMJJ_RS01600 -1.1 -1.3 radical SAM protein compare
MMJJ_RS04700 -1.1 -2.8 deoxyhypusine synthase compare
MMJJ_RS00355 -1.1 -1.3 ribonuclease P protein component 4 compare
MMJJ_RS07960 -1.1 -1.2 quinolinate synthase NadA compare
MMJJ_RS07035 -1.1 -1.0 glycosyl transferase compare
MMJJ_RS04655 -1.1 -2.9 FAD-dependent oxidoreductase compare
MMJJ_RS03245 -1.1 -1.1 UMP kinase compare
MMJJ_RS07245 -1.1 -2.9 amidohydrolase family protein compare
MMJJ_RS08230 -1.1 -1.3 ribose-5-phosphate isomerase RpiA compare
MMJJ_RS06705 -1.0 -2.9 bifunctional NADP phosphatase/NAD kinase compare
MMJJ_RS04770 -1.0 -1.5 formate-dependent phosphoribosylglycinamide formyltransferase compare
MMJJ_RS03490 -1.0 -0.8 ribonuclease VapC compare
MMJJ_RS05645 -1.0 -2.2 4Fe-4S binding protein compare
MMJJ_RS03895 -1.0 -1.7 hydrogenase expression/formation protein HypE compare
MMJJ_RS09130 -1.0 -0.8 NFYB/HAP3 family transcription factor subunit compare
MMJJ_RS03005 -1.0 -1.3 Ni-sirohydrochlorin a,c-diamide reductive cyclase catalytic subunit compare
MMJJ_RS07875 -1.0 -1.4 FAD-dependent oxidoreductase compare
MMJJ_RS04520 -1.0 -2.6 coenzyme F430 synthase compare
MMJJ_RS04790 -1.0 -2.3 biotin--[acetyl-CoA-carboxylase] ligase compare
MMJJ_RS07945 -1.0 -1.0 4Fe-4S binding protein compare
MMJJ_RS02275 -1.0 -1.9 nucleotidyltransferase domain-containing protein compare
MMJJ_RS07015 -1.0 -1.1 PFL family protein compare
MMJJ_RS08855 -1.0 -1.9 cyclic pyranopterin monophosphate synthase MoaC compare
MMJJ_RS03840 -0.9 -1.9 DHH family phosphoesterase compare
MMJJ_RS01415 -0.9 -1.2 beta-CASP ribonuclease aCPSF1 compare
MMJJ_RS06375 -0.9 -2.1 UbiX family flavin prenyltransferase compare
MMJJ_RS06865 -0.9 -1.9 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS05065 -0.9 -1.5 (4-{4-[2-(gamma-L- glutamylamino)ethyl]phenoxymethyl}furan-2-yl)methanamine synthase compare
MMJJ_RS05160 -0.9 -1.5 RNA-binding protein compare
MMJJ_RS04145 -0.9 -3.7 glutamate-1-semialdehyde 2,1-aminomutase compare
MMJJ_RS04980 -0.9 -1.9 bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase compare
MMJJ_RS04110 -0.9 -2.7 hypothetical protein compare
MMJJ_RS03785 -0.9 -1.1 hypothetical protein compare
MMJJ_RS08720 -0.9 -6.7 UDP-glucose/GDP-mannose dehydrogenase family protein compare
MMJJ_RS06860 -0.9 -1.5 hypothetical protein compare
MMJJ_RS03995 -0.9 -4.0 PHP domain-containing protein compare
MMJJ_RS06725 -0.9 -4.4 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMJJ_RS04975 -0.9 -0.8 glycosyltransferase family 4 protein compare
MMJJ_RS05490 -0.9 -1.1 imidazole glycerol phosphate synthase subunit HisF compare
MMJJ_RS06695 -0.9 -1.1 amidohydrolase compare
MMJJ_RS02040 -0.9 -1.5 Asp-tRNA(Asn) amidotransferase subunit GatC compare
MMJJ_RS03650 -0.9 -3.3 class I SAM-dependent methyltransferase family protein compare
MMJJ_RS02140 -0.9 -4.5 preflagellin peptidase FlaK compare
MMJJ_RS03810 -0.8 -2.0 AIR synthase-related protein compare
MMJJ_RS00425 -0.8 -1.8 hypothetical protein compare
MMJJ_RS07655 -0.8 -6.2 hypothetical protein compare
MMJJ_RS05790 -0.8 -5.3 flagellin compare
MMJJ_RS05760 -0.8 -6.9 flagellar protein F compare
MMJJ_RS04620 -0.8 -1.2 homocitrate synthase family protein compare
MMJJ_RS08715 -0.8 -4.6 NAD-dependent epimerase/dehydratase family protein compare
MMJJ_RS05510 -0.8 -6.2 archaellum operon transcriptional activator EarA family protein compare
MMJJ_RS07190 -0.8 -2.0 RtcB family protein compare
MMJJ_RS00415 -0.8 -3.1 DedA family protein compare
MMJJ_RS04040 -0.8 -2.8 prefoldin subunit beta compare
MMJJ_RS08660 -0.8 -1.3 acetylornithine transaminase compare
MMJJ_RS05655 -0.8 -2.3 HisA/HisF family protein compare
MMJJ_RS06255 -0.8 -2.6 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 compare
MMJJ_RS03295 -0.8 -4.5 PHP domain-containing protein compare
MMJJ_RS07030 -0.8 -6.6 hypothetical protein compare
MMJJ_RS00370 -0.8 -0.9 asparagine synthase (glutamine-hydrolyzing) compare
MMJJ_RS06170 -0.8 -3.6 hypothetical protein compare
MMJJ_RS02200 -0.8 -3.2 chorismate pyruvate-lyase family protein compare
MMJJ_RS04995 -0.8 -2.0 Tfx family DNA-binding protein compare
MMJJ_RS07725 -0.8 -2.4 DNA primase DnaG compare
MMJJ_RS03155 -0.8 -4.6 hypothetical protein compare
MMJJ_RS03150 -0.8 -2.2 2-phospho-L-lactate transferase compare
MMJJ_RS00265 -0.8 -3.1 TIGR02253 family HAD-type hydrolase compare
MMJJ_RS07165 -0.8 -6.4 chromosome segregation protein SMC compare
MMJJ_RS01475 -0.7 -0.9 signal recognition particle-docking protein FtsY compare
MMJJ_RS08710 -0.7 -4.1 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMJJ_RS05740 -0.7 -6.0 archaellar assembly protein FlaJ compare
MMJJ_RS05750 -0.7 -5.7 flagellar accessory protein FlaH compare
MMJJ_RS05360 -0.7 -3.1 nickel-responsive transcriptional regulator NikR compare
MMJJ_RS05810 -0.7 -1.7 precorrin-4 C(11)-methyltransferase compare
MMJJ_RS04595 -0.7 -2.3 hypothetical protein compare
MMJJ_RS01915 -0.7 -4.2 precorrin-6A reductase compare
MMJJ_RS04685 -0.7 -2.5 carbamoyltransferase HypF compare
MMJJ_RS03845 -0.7 -1.6 translation initiation factor IF-2 compare
MMJJ_RS09375 -0.7 -0.7 hypothetical protein compare
MMJJ_RS08250 -0.7 -2.0 hydrogenase maturation peptidase HycI compare
MMJJ_RS05745 -0.7 -5.6 type II/IV secretion system ATPase subunit compare
MMJJ_RS02055 -0.7 -4.2 GTP 3',8-cyclase MoaA compare
MMJJ_RS07380 -0.7 -2.7 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMJJ_RS04575 -0.7 -4.0 DUF116 domain-containing protein compare
MMJJ_RS00040 -0.7 -3.1 CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon compare
MMJJ_RS08765 -0.7 -5.1 glycosyltransferase family 9 protein compare
MMJJ_RS08325 -0.7 -1.2 glycosyltransferase family 2 protein compare
MMJJ_RS08035 -0.7 -2.4 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMJJ_RS08340 -0.7 -1.7 archaeoflavoprotein AfpA compare
MMJJ_RS05755 -0.7 -5.1 flagellar protein G compare
MMJJ_RS08780 -0.7 -3.4 D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase compare
MMJJ_RS07785 -0.7 -1.0 fumarate reductase subunit A compare
MMJJ_RS07705 -0.7 -0.9 GTP-binding protein EngB compare
MMJJ_RS03875 -0.7 -1.1 CBS domain-containing protein compare
MMJJ_RS06565 -0.7 -3.8 segregation/condensation protein A compare
MMJJ_RS06760 -0.7 -1.7 Ni-sirohydrochlorin a,c-diamide synthase compare
MMJJ_RS04565 -0.7 -1.1 sirohydrochlorin nickelochelatase compare
MMJJ_RS00580 -0.6 -0.5 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG compare
MMJJ_RS05915 -0.6 -1.8 multiprotein bridging factor aMBF1 compare
MMJJ_RS08080 -0.6 -2.6 TIGR00300 family protein compare
MMJJ_RS05785 -0.6 -4.0 flagellin compare
MMJJ_RS00195 -0.6 -1.2 precorrin-3B C(17)-methyltransferase compare
MMJJ_RS01865 -0.6 -1.9 peptidyl-tRNA hydrolase Pth2 compare
MMJJ_RS07805 -0.6 -2.9 ferredoxin family protein compare
MMJJ_RS08620 -0.6 -1.5 DUF373 family protein compare
MMJJ_RS07280 -0.6 -3.5 phosphomannomutase/phosphoglucomutase compare
MMJJ_RS04360 -0.6 -4.7 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS07715 -0.6 -1.1 UbiD family decarboxylase compare
MMJJ_RS08925 -0.6 -3.7 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS04485 -0.6 -2.9 riboflavin synthase compare
MMJJ_RS05950 -0.6 -0.9 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
MMJJ_RS08770 -0.6 -3.3 HAD family hydrolase compare
MMJJ_RS08730 -0.6 -4.8 glycosyltransferase family 4 protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in attachment assay; attached sample experiments