Experiment set6S690 for Methanococcus maripaludis JJ

Compare to:

McCas-formate low carbon steel attached

200 most important genes:

  gene name fitness t score description  
MMJJ_RS04050 -6.3 -2.3 dihydroneopterin aldolase family protein compare
MMJJ_RS06855 -5.6 -2.0 DUF2104 domain-containing protein compare
MMJJ_RS07720 -5.3 -2.2 UPF0058 family protein compare
MMJJ_RS06625 -4.5 -1.9 pyruvate synthase subunit PorB compare
MMJJ_RS02920 -4.3 -1.8 30S ribosomal protein S27ae compare
MMJJ_RS03270 -4.1 -2.6 ribosome biogenesis/translation initiation ATPase RLI compare
MMJJ_RS00275 -4.1 -1.9 coenzyme F420-0:L-glutamate ligase compare
MMJJ_RS04970 -4.0 -2.5 DUF655 domain-containing protein compare
MMJJ_RS08320 -3.9 -3.0 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
MMJJ_RS03190 -3.7 -2.2 phosphopyruvate hydratase compare
MMJJ_RS05765 -3.7 -1.6 flagellar protein E compare
MMJJ_RS03785 -3.7 -3.0 hypothetical protein compare
MMJJ_RS08660 -3.7 -3.6 acetylornithine transaminase compare
MMJJ_RS03865 -3.6 -1.3 phosphoribosyl-AMP cyclohydrolase compare
MMJJ_RS00580 -3.4 -2.0 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG compare
MMJJ_RS03820 -3.1 -4.2 hydrogenase formation protein HypD compare
MMJJ_RS02275 -2.9 -3.9 nucleotidyltransferase domain-containing protein compare
MMJJ_RS03965 -2.9 -2.1 DNA-directed RNA polymerase subunit L compare
MMJJ_RS03670 -2.6 -4.1 precorrin-2 C(20)-methyltransferase compare
MMJJ_RS03895 -2.6 -2.7 hydrogenase expression/formation protein HypE compare
MMJJ_RS00205 -2.5 -4.8 adenosylcobinamide-phosphate synthase CbiB compare
MMJJ_RS00570 -2.4 -1.4 ribonuclease P compare
MMJJ_RS06485 -2.3 -2.3 phosphoglycerate kinase compare
MMJJ_RS05620 -2.3 -3.6 CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein compare
MMJJ_RS03095 -2.2 -2.1 bifunctional N(6)-L-threonylcarbamoyladenine synthase/serine/threonine protein kinase compare
MMJJ_RS05070 -2.2 -1.5 DNA primase catalytic subunit PriS compare
MMJJ_RS01360 -2.2 -2.1 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMJJ_RS05590 -2.2 -1.3 homoserine dehydrogenase compare
MMJJ_RS06750 -2.1 -2.3 homoaconitase large subunit compare
MMJJ_RS05930 -2.1 -1.2 cell division protein SepF compare
MMJJ_RS05260 -2.0 -4.4 ATP-grasp domain-containing protein compare
MMJJ_RS05710 -2.0 -3.5 single-stranded-DNA-specific exonuclease RecJ compare
MMJJ_RS09375 -2.0 -1.3 hypothetical protein compare
MMJJ_RS08330 -2.0 -2.6 SufD family Fe-S cluster assembly protein compare
MMJJ_RS08840 -2.0 -3.0 calcium/sodium antiporter compare
MMJJ_RS01405 -2.0 -1.5 proline--tRNA ligase compare
MMJJ_RS06180 -1.9 -2.1 tryptophan--tRNA ligase compare
MMJJ_RS05810 -1.9 -4.4 precorrin-4 C(11)-methyltransferase compare
MMJJ_RS06695 -1.9 -2.0 amidohydrolase compare
MMJJ_RS08325 -1.9 -2.3 glycosyltransferase family 2 protein compare
MMJJ_RS03580 -1.9 -2.0 TIGR00303 family protein compare
MMJJ_RS04200 -1.8 -4.1 triphosphoribosyl-dephospho-CoA synthase compare
MMJJ_RS06490 -1.8 -1.7 methanogenesis marker 2 protein compare
MMJJ_RS01750 -1.8 -1.8 ferrous iron transport protein A compare
MMJJ_RS06875 -1.8 -1.4 hypothetical protein compare
MMJJ_RS08155 -1.8 -2.5 cobalt-precorrin-5B (C(1))-methyltransferase CbiD compare
MMJJ_RS03660 -1.8 -2.7 DUF447 family protein compare
MMJJ_RS06155 -1.7 -2.9 phosphatidylglycerophosphatase A compare
MMJJ_RS03225 -1.7 -1.9 4Fe-4S binding protein compare
MMJJ_RS05610 -1.7 -3.5 CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMJJ_RS07350 -1.7 -2.1 4Fe-4S binding protein compare
MMJJ_RS06930 -1.7 -1.8 type II methionyl aminopeptidase compare
MMJJ_RS06700 -1.6 -3.3 L-seryl-tRNA(Sec) kinase compare
MMJJ_RS06040 -1.6 -1.7 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS08725 -1.6 -7.8 flippase compare
MMJJ_RS04655 -1.6 -2.8 FAD-dependent oxidoreductase compare
MMJJ_RS03840 -1.6 -2.5 DHH family phosphoesterase compare
MMJJ_RS05415 -1.6 -1.5 hypothetical protein compare
MMJJ_RS03005 -1.6 -2.0 Ni-sirohydrochlorin a,c-diamide reductive cyclase catalytic subunit compare
MMJJ_RS04615 -1.6 -2.6 methanogenesis marker 3 protein compare
MMJJ_RS07275 -1.6 -1.5 formate--phosphoribosylaminoimidazolecarboxamide ligase compare
MMJJ_RS00270 -1.6 -1.4 adenosylcobinamide-GDP ribazoletransferase compare
MMJJ_RS08855 -1.5 -1.7 cyclic pyranopterin monophosphate synthase MoaC compare
MMJJ_RS07640 -1.5 -12.0 cache domain-containing protein compare
MMJJ_RS06380 -1.5 -2.7 signal recognition particle protein Srp54 compare
MMJJ_RS07840 -1.5 -2.0 Glu-tRNA(Gln) amidotransferase subunit GatD compare
MMJJ_RS04675 -1.5 -3.2 thiamine pyrophosphate-binding protein compare
MMJJ_RS03060 -1.4 -2.0 methanogenesis marker 7 protein compare
MMJJ_RS04620 -1.4 -2.1 homocitrate synthase family protein compare
MMJJ_RS01755 -1.4 -1.3 ferrous iron transport protein B compare
MMJJ_RS05650 -1.4 -1.7 formylmethanofuran dehydrogenase subunit B compare
MMJJ_RS07635 -1.4 -7.2 response regulator transcription factor compare
MMJJ_RS08095 -1.3 -1.9 cobyric acid synthase CobQ compare
MMJJ_RS05645 -1.3 -2.8 4Fe-4S binding protein compare
MMJJ_RS06905 -1.3 -1.5 hypothetical protein compare
MMJJ_RS08000 -1.3 -6.8 HesA/MoeB/ThiF family protein compare
MMJJ_RS01690 -1.3 -2.5 methanogenesis marker 12 protein compare
MMJJ_RS06240 -1.3 -1.1 dihydropteroate synthase-like protein compare
MMJJ_RS05420 -1.2 -2.5 DNA-directed DNA polymerase II small subunit compare
MMJJ_RS06575 -1.2 -2.5 prephenate dehydrogenase compare
MMJJ_RS04145 -1.2 -3.8 glutamate-1-semialdehyde 2,1-aminomutase compare
MMJJ_RS07995 -1.2 -4.7 molybdenum cofactor biosynthesis protein MoaE compare
MMJJ_RS07970 -1.2 -1.8 O-phospho-L-seryl-tRNA:Cys-tRNA synthase compare
MMJJ_RS03240 -1.2 -2.2 histone family protein compare
MMJJ_RS05655 -1.2 -3.2 HisA/HisF family protein compare
MMJJ_RS03200 -1.2 -1.1 uroporphyrinogen-III synthase compare
MMJJ_RS01880 -1.2 -1.4 RlmE family RNA methyltransferase compare
MMJJ_RS06390 -1.2 -1.1 NADPH-dependent F420 reductase compare
MMJJ_RS07875 -1.2 -1.0 FAD-dependent oxidoreductase compare
MMJJ_RS00450 -1.2 -1.0 DUF126 domain-containing protein compare
MMJJ_RS09190 -1.2 -0.9 tryptophan synthase subunit beta compare
MMJJ_RS06860 -1.1 -2.1 hypothetical protein compare
MMJJ_RS08715 -1.1 -5.5 NAD-dependent epimerase/dehydratase family protein compare
MMJJ_RS04980 -1.1 -2.2 bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase compare
MMJJ_RS09175 -1.1 -0.7 anthranilate synthase component I compare
MMJJ_RS01475 -1.1 -1.4 signal recognition particle-docking protein FtsY compare
MMJJ_RS08720 -1.1 -7.9 UDP-glucose/GDP-mannose dehydrogenase family protein compare
MMJJ_RS01600 -1.1 -1.3 radical SAM protein compare
MMJJ_RS03295 -1.1 -5.4 PHP domain-containing protein compare
MMJJ_RS06185 -1.1 -2.3 cobalamin biosynthesis protein compare
MMJJ_RS03055 -1.1 -1.4 hypothetical protein compare
MMJJ_RS07000 -1.1 -1.0 TrkH family potassium uptake protein compare
MMJJ_RS03125 -1.1 -2.4 GMC oxidoreductase compare
MMJJ_RS04650 -1.1 -2.4 nitrogenase iron protein compare
MMJJ_RS01345 -1.0 -2.6 (5-formylfuran-3-yl)methyl phosphate synthase compare
MMJJ_RS06910 -1.0 -1.6 energy-converting NiFe hydrogenase A subunit EhaA compare
MMJJ_RS06865 -1.0 -1.8 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS04685 -1.0 -2.9 carbamoyltransferase HypF compare
MMJJ_RS07415 -1.0 -1.6 polyprenyl diphosphate synthase compare
MMJJ_RS07785 -1.0 -1.2 fumarate reductase subunit A compare
MMJJ_RS08340 -1.0 -2.1 archaeoflavoprotein AfpA compare
MMJJ_RS03110 -1.0 -1.2 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase compare
MMJJ_RS09120 -1.0 -1.4 aspartate kinase compare
MMJJ_RS03150 -1.0 -2.3 2-phospho-L-lactate transferase compare
MMJJ_RS04520 -1.0 -2.8 coenzyme F430 synthase compare
MMJJ_RS04155 -1.0 -2.0 hypothetical protein compare
MMJJ_RS06110 -1.0 -1.1 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC compare
MMJJ_RS07035 -1.0 -1.3 glycosyl transferase compare
MMJJ_RS06725 -1.0 -4.4 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMJJ_RS02140 -1.0 -5.3 preflagellin peptidase FlaK compare
MMJJ_RS03995 -1.0 -3.5 PHP domain-containing protein compare
MMJJ_RS05490 -1.0 -1.1 imidazole glycerol phosphate synthase subunit HisF compare
MMJJ_RS05510 -0.9 -7.6 archaellum operon transcriptional activator EarA family protein compare
MMJJ_RS07190 -0.9 -1.5 RtcB family protein compare
MMJJ_RS04670 -0.9 -2.3 DUF2117 domain-containing protein compare
MMJJ_RS05760 -0.9 -7.0 flagellar protein F compare
MMJJ_RS07360 -0.9 -0.6 TIGR00269 family protein compare
MMJJ_RS05755 -0.9 -6.9 flagellar protein G compare
MMJJ_RS00415 -0.9 -4.0 DedA family protein compare
MMJJ_RS06215 -0.9 -2.1 agmatinase compare
MMJJ_RS05745 -0.9 -6.6 type II/IV secretion system ATPase subunit compare
MMJJ_RS03160 -0.9 -5.8 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS07455 -0.9 -1.6 coenzyme F420-reducing hydrogenase, FrhD protein compare
MMJJ_RS07660 -0.9 -3.4 carbonic anhydrase compare
MMJJ_RS01410 -0.9 -2.7 archaeal proteasome endopeptidase complex subunit beta compare
MMJJ_RS00600 -0.9 -0.9 hydroxymethylbilane synthase compare
MMJJ_RS06800 -0.9 -3.6 prefoldin subunit alpha compare
MMJJ_RS07505 -0.9 -0.7 DNA-directed RNA polymerase subunit K compare
MMJJ_RS05295 -0.9 -3.6 cobyrinic acid a,c-diamide synthase compare
MMJJ_RS04565 -0.9 -1.2 sirohydrochlorin nickelochelatase compare
MMJJ_RS05750 -0.9 -6.1 flagellar accessory protein FlaH compare
MMJJ_RS06885 -0.9 -1.0 EhaF family protein compare
MMJJ_RS08780 -0.8 -3.8 D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase compare
MMJJ_RS07030 -0.8 -7.0 hypothetical protein compare
MMJJ_RS06840 -0.8 -1.3 nickel-dependent hydrogenase large subunit compare
MMJJ_RS07655 -0.8 -5.7 hypothetical protein compare
MMJJ_RS03170 -0.8 -2.8 DUF5612 domain-containing protein compare
MMJJ_RS05720 -0.8 -1.3 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMJJ_RS05595 -0.8 -1.6 hypothetical protein compare
MMJJ_RS05950 -0.8 -1.0 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
MMJJ_RS03430 -0.8 -1.8 winged helix-turn-helix domain-containing protein compare
MMJJ_RS08925 -0.8 -4.9 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS02090 -0.8 -1.6 tyramine--L-glutamate ligase compare
MMJJ_RS04770 -0.8 -1.1 formate-dependent phosphoribosylglycinamide formyltransferase compare
MMJJ_RS05740 -0.8 -6.2 archaellar assembly protein FlaJ compare
MMJJ_RS05780 -0.8 -1.0 flagellin compare
MMJJ_RS00355 -0.8 -0.7 ribonuclease P protein component 4 compare
MMJJ_RS01810 -0.8 -0.8 methyl coenzyme M reductase system, component A2 compare
MMJJ_RS05790 -0.8 -5.0 flagellin compare
MMJJ_RS06000 -0.8 -2.3 cation:proton antiporter subunit C compare
MMJJ_RS06565 -0.8 -3.3 segregation/condensation protein A compare
MMJJ_RS00215 -0.8 -0.7 CCA tRNA nucleotidyltransferase compare
MMJJ_RS03845 -0.8 -1.8 translation initiation factor IF-2 compare
MMJJ_RS03310 -0.8 -1.5 hypothetical protein compare
MMJJ_RS03250 -0.8 -1.3 DUF2116 family Zn-ribbon domain-containing protein compare
MMJJ_RS07725 -0.7 -1.7 DNA primase DnaG compare
MMJJ_RS07810 -0.7 -4.5 3-methyl-2-oxobutanoate dehydrogenase subunit VorB compare
MMJJ_RS00430 -0.7 -1.0 ribonuclease Z compare
MMJJ_RS07165 -0.7 -5.7 chromosome segregation protein SMC compare
MMJJ_RS07355 -0.7 -2.0 MoaD/ThiS family protein compare
MMJJ_RS01935 -0.7 -1.1 O-phosphoseryl-tRNA(Sec) selenium transferase compare
MMJJ_RS08770 -0.7 -3.0 HAD family hydrolase compare
MMJJ_RS03620 -0.7 -1.4 DUF2097 domain-containing protein compare
MMJJ_RS07375 -0.7 -2.6 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMJJ_RS08615 -0.7 -4.0 oligosaccharide repeat unit polymerase family protein compare
MMJJ_RS04985 -0.7 -1.2 glutamyl-tRNA reductase compare
MMJJ_RS07280 -0.7 -3.4 phosphomannomutase/phosphoglucomutase compare
MMJJ_RS06340 -0.7 -1.2 coenzyme-B sulfoethylthiotransferase subunit alpha compare
MMJJ_RS06150 -0.7 -2.0 DUF483 domain-containing protein compare
MMJJ_RS08080 -0.7 -2.0 TIGR00300 family protein compare
MMJJ_RS08730 -0.7 -5.1 glycosyltransferase family 4 protein compare
MMJJ_RS02055 -0.7 -3.4 GTP 3',8-cyclase MoaA compare
MMJJ_RS05445 -0.7 -0.7 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMJJ_RS05785 -0.7 -4.3 flagellin compare
MMJJ_RS03875 -0.7 -1.2 CBS domain-containing protein compare
MMJJ_RS04480 -0.7 -1.5 hypothetical protein compare
MMJJ_RS07155 -0.7 -2.5 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMJJ_RS08235 -0.6 -1.4 UPF0147 family protein compare
MMJJ_RS08710 -0.6 -3.3 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMJJ_RS08870 -0.6 -0.6 2-isopropylmalate synthase compare
MMJJ_RS06510 -0.6 -0.7 LL-diaminopimelate aminotransferase compare
MMJJ_RS00300 -0.6 -3.9 chemotaxis protein CheC compare
MMJJ_RS05360 -0.6 -2.1 nickel-responsive transcriptional regulator NikR compare
MMJJ_RS06600 -0.6 -0.6 DUF555 domain-containing protein compare
MMJJ_RS00370 -0.6 -0.7 asparagine synthase (glutamine-hydrolyzing) compare
MMJJ_RS01355 -0.6 -0.7 UDP-N-acetyl-D-mannosamine dehydrogenase compare
MMJJ_RS02190 -0.6 -4.1 molybdopterin biosynthesis protein compare
MMJJ_RS02045 -0.6 -0.6 molybdenum cofactor guanylyltransferase compare
MMJJ_RS07665 -0.6 -5.0 formate dehydrogenase subunit alpha compare
MMJJ_RS03185 -0.6 -0.9 alanine--tRNA ligase compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in attachment assay; attached sample experiments