Experiment set6S688 for Methanococcus maripaludis JJ

Compare to:

McCas-formate glass attached

200 most important genes:

  gene name fitness t score description  
MMJJ_RS00475 -5.7 -1.7 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
MMJJ_RS03055 -5.6 -1.9 hypothetical protein compare
MMJJ_RS09130 -5.4 -1.6 NFYB/HAP3 family transcription factor subunit compare
MMJJ_RS00560 -5.4 -2.4 homoisocitrate dehydrogenase compare
MMJJ_RS06750 -5.2 -1.7 homoaconitase large subunit compare
MMJJ_RS06875 -5.1 -1.7 hypothetical protein compare
MMJJ_RS07720 -5.1 -1.5 UPF0058 family protein compare
MMJJ_RS08320 -5.1 -1.7 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
MMJJ_RS01475 -4.9 -1.6 signal recognition particle-docking protein FtsY compare
MMJJ_RS09190 -4.8 -1.2 tryptophan synthase subunit beta compare
MMJJ_RS07000 -4.8 -1.4 TrkH family potassium uptake protein compare
MMJJ_RS07875 -4.7 -1.7 FAD-dependent oxidoreductase compare
MMJJ_RS06250 -4.7 -1.8 nicotinamide-nucleotide adenylyltransferase compare
MMJJ_RS01360 -4.7 -1.7 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMJJ_RS05280 -4.4 -0.9 hypothetical protein compare
MMJJ_RS06110 -4.4 -1.6 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC compare
MMJJ_RS00355 -4.3 -1.7 ribonuclease P protein component 4 compare
MMJJ_RS07350 -4.3 -1.8 4Fe-4S binding protein compare
MMJJ_RS05415 -4.3 -1.4 hypothetical protein compare
MMJJ_RS08850 -4.0 -1.5 succinate dehydrogenase/fumarate reductase iron-sulfur subunit compare
MMJJ_RS07945 -4.0 -1.6 4Fe-4S binding protein compare
MMJJ_RS05780 -4.0 -2.9 flagellin compare
MMJJ_RS00275 -4.0 -1.3 coenzyme F420-0:L-glutamate ligase compare
MMJJ_RS06485 -3.8 -1.6 phosphoglycerate kinase compare
MMJJ_RS05490 -3.7 -1.5 imidazole glycerol phosphate synthase subunit HisF compare
MMJJ_RS06840 -3.4 -1.8 nickel-dependent hydrogenase large subunit compare
MMJJ_RS03865 -3.4 -0.9 phosphoribosyl-AMP cyclohydrolase compare
MMJJ_RS07950 -3.3 -2.1 4Fe-4S binding protein compare
MMJJ_RS02275 -3.0 -2.8 nucleotidyltransferase domain-containing protein compare
MMJJ_RS00600 -2.9 -1.7 hydroxymethylbilane synthase compare
MMJJ_RS08230 -2.9 -2.9 ribose-5-phosphate isomerase RpiA compare
MMJJ_RS05765 -2.9 -1.0 flagellar protein E compare
MMJJ_RS06880 -2.8 -1.0 EhaG family protein compare
MMJJ_RS05620 -2.8 -3.8 CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein compare
MMJJ_RS08330 -2.8 -2.6 SufD family Fe-S cluster assembly protein compare
MMJJ_RS04200 -2.7 -3.6 triphosphoribosyl-dephospho-CoA synthase compare
MMJJ_RS06930 -2.7 -1.8 type II methionyl aminopeptidase compare
MMJJ_RS07035 -2.7 -2.3 glycosyl transferase compare
MMJJ_RS07360 -2.7 -1.2 TIGR00269 family protein compare
MMJJ_RS01355 -2.5 -2.2 UDP-N-acetyl-D-mannosamine dehydrogenase compare
MMJJ_RS07275 -2.5 -2.0 formate--phosphoribosylaminoimidazolecarboxamide ligase compare
MMJJ_RS01810 -2.5 -1.1 methyl coenzyme M reductase system, component A2 compare
MMJJ_RS03230 -2.3 -2.4 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS03660 -2.3 -2.3 DUF447 family protein compare
MMJJ_RS04685 -2.3 -4.5 carbamoyltransferase HypF compare
MMJJ_RS02040 -2.3 -1.4 Asp-tRNA(Asn) amidotransferase subunit GatC compare
MMJJ_RS05770 -2.2 -1.7 flagellar protein D compare
MMJJ_RS04655 -2.2 -3.5 FAD-dependent oxidoreductase compare
MMJJ_RS00195 -2.1 -2.7 precorrin-3B C(17)-methyltransferase compare
MMJJ_RS04975 -2.1 -1.3 glycosyltransferase family 4 protein compare
MMJJ_RS05610 -2.0 -2.5 CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMJJ_RS00270 -2.0 -1.7 adenosylcobinamide-GDP ribazoletransferase compare
MMJJ_RS01600 -2.0 -1.6 radical SAM protein compare
MMJJ_RS06705 -2.0 -2.5 bifunctional NADP phosphatase/NAD kinase compare
MMJJ_RS03820 -1.9 -2.0 hydrogenase formation protein HypD compare
MMJJ_RS03110 -1.9 -1.8 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase compare
MMJJ_RS03270 -1.9 -1.1 ribosome biogenesis/translation initiation ATPase RLI compare
MMJJ_RS08625 -1.8 -3.6 magnesium/cobalt transporter CorA compare
MMJJ_RS05595 -1.8 -1.7 hypothetical protein compare
MMJJ_RS04620 -1.8 -1.8 homocitrate synthase family protein compare
MMJJ_RS07170 -1.7 -2.4 pyridoxal phosphate-dependent aminotransferase compare
MMJJ_RS06490 -1.7 -1.5 methanogenesis marker 2 protein compare
MMJJ_RS06380 -1.7 -2.5 signal recognition particle protein Srp54 compare
MMJJ_RS08795 -1.7 -1.2 phosphoglucosamine mutase compare
MMJJ_RS03615 -1.6 -1.2 cobalt-precorrin-8 methylmutase compare
MMJJ_RS03310 -1.6 -1.7 hypothetical protein compare
MMJJ_RS04770 -1.5 -1.9 formate-dependent phosphoribosylglycinamide formyltransferase compare
MMJJ_RS08340 -1.5 -2.5 archaeoflavoprotein AfpA compare
MMJJ_RS04985 -1.5 -2.2 glutamyl-tRNA reductase compare
MMJJ_RS06575 -1.5 -2.5 prephenate dehydrogenase compare
MMJJ_RS06855 -1.5 -0.9 DUF2104 domain-containing protein compare
MMJJ_RS04670 -1.5 -2.4 DUF2117 domain-containing protein compare
MMJJ_RS07680 -1.5 -5.4 glucose-6-phosphate isomerase compare
MMJJ_RS08095 -1.4 -1.7 cobyric acid synthase CobQ compare
MMJJ_RS07415 -1.4 -1.7 polyprenyl diphosphate synthase compare
MMJJ_RS08325 -1.4 -1.3 glycosyltransferase family 2 protein compare
MMJJ_RS05995 -1.4 -0.9 ATP-binding cassette domain-containing protein compare
MMJJ_RS04615 -1.4 -2.1 methanogenesis marker 3 protein compare
MMJJ_RS03995 -1.4 -1.7 PHP domain-containing protein compare
MMJJ_RS03895 -1.4 -1.4 hydrogenase expression/formation protein HypE compare
MMJJ_RS03650 -1.4 -2.8 class I SAM-dependent methyltransferase family protein compare
MMJJ_RS04675 -1.3 -2.6 thiamine pyrophosphate-binding protein compare
MMJJ_RS04970 -1.3 -0.8 DUF655 domain-containing protein compare
MMJJ_RS01690 -1.3 -1.4 methanogenesis marker 12 protein compare
MMJJ_RS05950 -1.3 -1.0 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
MMJJ_RS03190 -1.3 -1.1 phosphopyruvate hydratase compare
MMJJ_RS08730 -1.3 -6.9 glycosyltransferase family 4 protein compare
MMJJ_RS01875 -1.3 -2.1 global nitrogen regulator NrpR compare
MMJJ_RS03840 -1.2 -1.5 DHH family phosphoesterase compare
MMJJ_RS00425 -1.2 -1.2 hypothetical protein compare
MMJJ_RS05155 -1.2 -2.0 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMJJ_RS03580 -1.2 -1.2 TIGR00303 family protein compare
MMJJ_RS06390 -1.2 -0.7 NADPH-dependent F420 reductase compare
MMJJ_RS05260 -1.2 -2.0 ATP-grasp domain-containing protein compare
MMJJ_RS03240 -1.2 -1.2 histone family protein compare
MMJJ_RS05935 -1.2 -0.8 Era-like GTP-binding protein compare
MMJJ_RS08710 -1.2 -4.4 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMJJ_RS06905 -1.2 -1.1 hypothetical protein compare
MMJJ_RS08715 -1.2 -3.8 NAD-dependent epimerase/dehydratase family protein compare
MMJJ_RS04155 -1.2 -2.0 hypothetical protein compare
MMJJ_RS08250 -1.1 -1.9 hydrogenase maturation peptidase HycI compare
MMJJ_RS04475 -1.1 -1.6 3,4-dihydroxy-2-butanone-4-phosphate synthase compare
MMJJ_RS04110 -1.1 -2.2 hypothetical protein compare
MMJJ_RS08785 -1.1 -4.4 D-sedoheptulose 7-phosphate isomerase compare
MMJJ_RS07430 -1.1 -0.7 ribonuclease VapC compare
MMJJ_RS03585 -1.1 -0.8 methanogenesis marker 6 protein compare
MMJJ_RS03060 -1.1 -1.2 methanogenesis marker 7 protein compare
MMJJ_RS06600 -1.1 -0.7 DUF555 domain-containing protein compare
MMJJ_RS03635 -1.1 -1.9 methionine--tRNA ligase compare
MMJJ_RS00570 -1.1 -0.6 ribonuclease P compare
MMJJ_RS07015 -1.1 -0.9 PFL family protein compare
MMJJ_RS04050 -1.1 -0.6 dihydroneopterin aldolase family protein compare
MMJJ_RS03225 -1.0 -1.0 4Fe-4S binding protein compare
MMJJ_RS08775 -1.0 -4.8 PfkB family carbohydrate kinase compare
MMJJ_RS04720 -1.0 -1.2 IMP dehydrogenase compare
MMJJ_RS07280 -1.0 -3.5 phosphomannomutase/phosphoglucomutase compare
MMJJ_RS08840 -1.0 -1.0 calcium/sodium antiporter compare
MMJJ_RS06175 -1.0 -0.9 DUF1743 domain-containing protein compare
MMJJ_RS03845 -1.0 -1.4 translation initiation factor IF-2 compare
MMJJ_RS05645 -1.0 -1.4 4Fe-4S binding protein compare
MMJJ_RS03760 -1.0 -1.1 hydrogenase maturation nickel metallochaperone HypA compare
MMJJ_RS08770 -1.0 -2.9 HAD family hydrolase compare
MMJJ_RS08780 -1.0 -3.1 D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase compare
MMJJ_RS08760 -1.0 -4.9 glycosyltransferase family 9 protein compare
MMJJ_RS05295 -1.0 -3.0 cobyrinic acid a,c-diamide synthase compare
MMJJ_RS07725 -1.0 -1.9 DNA primase DnaG compare
MMJJ_RS08765 -0.9 -5.0 glycosyltransferase family 9 protein compare
MMJJ_RS03620 -0.9 -1.2 DUF2097 domain-containing protein compare
MMJJ_RS04360 -0.9 -4.3 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS04800 -0.9 -1.3 2-phospho-L-lactate guanylyltransferase compare
MMJJ_RS07245 -0.9 -1.6 amidohydrolase family protein compare
MMJJ_RS01825 -0.9 -3.2 DNA repair and recombination protein RadB compare
MMJJ_RS08750 -0.9 -5.6 glycosyltransferase compare
MMJJ_RS06185 -0.9 -1.5 cobalamin biosynthesis protein compare
MMJJ_RS00370 -0.9 -0.6 asparagine synthase (glutamine-hydrolyzing) compare
MMJJ_RS05810 -0.9 -1.7 precorrin-4 C(11)-methyltransferase compare
MMJJ_RS04520 -0.9 -1.7 coenzyme F430 synthase compare
MMJJ_RS09035 -0.9 -1.3 OB-fold nucleic acid binding domain-containing protein compare
MMJJ_RS08830 -0.9 -1.5 hypothetical protein compare
MMJJ_RS07155 -0.9 -2.7 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMJJ_RS06155 -0.9 -1.1 phosphatidylglycerophosphatase A compare
MMJJ_RS06040 -0.9 -0.9 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS08080 -0.8 -1.8 TIGR00300 family protein compare
MMJJ_RS03810 -0.8 -1.0 AIR synthase-related protein compare
MMJJ_RS06865 -0.8 -1.2 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS07970 -0.8 -1.0 O-phospho-L-seryl-tRNA:Cys-tRNA synthase compare
MMJJ_RS06665 -0.8 -2.1 DUF3236 domain-containing protein compare
MMJJ_RS04145 -0.8 -1.8 glutamate-1-semialdehyde 2,1-aminomutase compare
MMJJ_RS04575 -0.8 -2.7 DUF116 domain-containing protein compare
MMJJ_RS07935 -0.8 -0.9 protein fwdD compare
MMJJ_RS07030 -0.8 -5.5 hypothetical protein compare
MMJJ_RS04040 -0.8 -2.2 prefoldin subunit beta compare
MMJJ_RS05820 -0.8 -2.0 DUF2304 domain-containing protein compare
MMJJ_RS07470 -0.8 -0.5 50S ribosome-binding GTPase compare
MMJJ_RS06220 -0.8 -1.1 polyamine aminopropyltransferase compare
MMJJ_RS01415 -0.8 -0.6 beta-CASP ribonuclease aCPSF1 compare
MMJJ_RS06200 -0.8 -0.5 phosphoglycerate dehydrogenase compare
MMJJ_RS05755 -0.8 -4.4 flagellar protein G compare
MMJJ_RS05710 -0.8 -1.0 single-stranded-DNA-specific exonuclease RecJ compare
MMJJ_RS07585 -0.7 -2.4 DHH family phosphoesterase compare
MMJJ_RS08720 -0.7 -4.2 UDP-glucose/GDP-mannose dehydrogenase family protein compare
MMJJ_RS06180 -0.7 -0.7 tryptophan--tRNA ligase compare
MMJJ_RS05575 -0.7 -0.9 2-amino-5-formylamino-6-ribosylaminopyrimidin- 4(3H)-one 5'-monophosphate deformylase compare
MMJJ_RS00430 -0.7 -0.7 ribonuclease Z compare
MMJJ_RS07865 -0.7 -2.8 zinc ribbon domain-containing protein compare
MMJJ_RS04995 -0.7 -1.1 Tfx family DNA-binding protein compare
MMJJ_RS08725 -0.7 -3.2 flippase compare
MMJJ_RS07345 -0.7 -2.0 homocysteine biosynthesis protein compare
MMJJ_RS02090 -0.7 -1.1 tyramine--L-glutamate ligase compare
MMJJ_RS03155 -0.7 -2.8 hypothetical protein compare
MMJJ_RS05330 -0.7 -0.6 DNA polymerase II large subunit compare
MMJJ_RS08000 -0.7 -2.6 HesA/MoeB/ThiF family protein compare
MMJJ_RS00450 -0.7 -0.4 DUF126 domain-containing protein compare
MMJJ_RS01615 -0.7 -2.0 MoaD/ThiS family protein compare
MMJJ_RS06210 -0.7 -2.6 hypothetical protein compare
MMJJ_RS08855 -0.7 -1.1 cyclic pyranopterin monophosphate synthase MoaC compare
MMJJ_RS04480 -0.7 -1.3 hypothetical protein compare
MMJJ_RS01350 -0.7 -1.1 sodium:proton antiporter compare
MMJJ_RS05750 -0.7 -3.6 flagellar accessory protein FlaH compare
MMJJ_RS00205 -0.7 -1.1 adenosylcobinamide-phosphate synthase CbiB compare
MMJJ_RS08335 -0.7 -0.5 ABC transporter ATP-binding protein compare
MMJJ_RS08040 -0.7 -3.4 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS00550 -0.7 -2.4 AIR synthase-related protein compare
MMJJ_RS00415 -0.7 -2.0 DedA family protein compare
MMJJ_RS09085 -0.7 -3.2 minichromosome maintenance protein MCM compare
MMJJ_RS02125 -0.7 -1.4 hypothetical protein compare
MMJJ_RS08535 -0.7 -0.8 NOL1/NOP2/sun family putative RNA methylase compare
MMJJ_RS06885 -0.6 -0.7 EhaF family protein compare
MMJJ_RS07265 -0.6 -2.1 tRNA (adenine-N1)-methyltransferase compare
MMJJ_RS03490 -0.6 -0.4 ribonuclease VapC compare
MMJJ_RS03605 -0.6 -2.0 TIGR00297 family protein compare
MMJJ_RS00180 -0.6 -1.9 DNA topoisomerase I compare
MMJJ_RS07165 -0.6 -4.0 chromosome segregation protein SMC compare
MMJJ_RS04965 -0.6 -1.0 RNA polymerase Rpb4 family protein compare
MMJJ_RS01060 -0.6 -2.3 ABC transporter ATP-binding protein compare
MMJJ_RS06910 -0.6 -0.5 energy-converting NiFe hydrogenase A subunit EhaA compare
MMJJ_RS01010 -0.6 -5.4 right-handed parallel beta-helix repeat-containing protein compare
MMJJ_RS04580 -0.6 -3.4 2-phosphosulfolactate phosphatase compare
MMJJ_RS05070 -0.6 -0.4 DNA primase catalytic subunit PriS compare
MMJJ_RS07190 -0.6 -0.7 RtcB family protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in attachment assay; attached sample experiments