Experiment set6S687 for Methanococcus maripaludis JJ

Compare to:

McCas-formate glass attached

200 most important genes:

  gene name fitness t score description  
MMJJ_RS03055 -5.6 -2.1 hypothetical protein compare
MMJJ_RS08325 -5.5 -2.0 glycosyltransferase family 2 protein compare
MMJJ_RS09375 -5.5 -1.6 hypothetical protein compare
MMJJ_RS07415 -5.5 -2.2 polyprenyl diphosphate synthase compare
MMJJ_RS09130 -5.4 -1.8 NFYB/HAP3 family transcription factor subunit compare
MMJJ_RS06855 -5.3 -1.5 DUF2104 domain-containing protein compare
MMJJ_RS03660 -5.3 -2.6 DUF447 family protein compare
MMJJ_RS06750 -5.2 -1.9 homoaconitase large subunit compare
MMJJ_RS06875 -5.1 -1.8 hypothetical protein compare
MMJJ_RS07720 -5.1 -1.7 UPF0058 family protein compare
MMJJ_RS05935 -5.0 -1.8 Era-like GTP-binding protein compare
MMJJ_RS06390 -4.9 -1.6 NADPH-dependent F420 reductase compare
MMJJ_RS04975 -4.9 -1.8 glycosyltransferase family 4 protein compare
MMJJ_RS07875 -4.7 -1.9 FAD-dependent oxidoreductase compare
MMJJ_RS05445 -4.7 -1.5 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMJJ_RS01360 -4.6 -1.9 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMJJ_RS00370 -4.6 -1.5 asparagine synthase (glutamine-hydrolyzing) compare
MMJJ_RS06510 -4.5 -1.8 LL-diaminopimelate aminotransferase compare
MMJJ_RS05610 -4.4 -2.7 CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMJJ_RS05930 -4.4 -1.6 cell division protein SepF compare
MMJJ_RS06695 -4.3 -1.9 amidohydrolase compare
MMJJ_RS05770 -4.3 -2.4 flagellar protein D compare
MMJJ_RS05950 -4.3 -2.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
MMJJ_RS08850 -4.0 -1.6 succinate dehydrogenase/fumarate reductase iron-sulfur subunit compare
MMJJ_RS07945 -4.0 -1.7 4Fe-4S binding protein compare
MMJJ_RS04790 -4.0 -1.9 biotin--[acetyl-CoA-carboxylase] ligase compare
MMJJ_RS00275 -4.0 -1.4 coenzyme F420-0:L-glutamate ligase compare
MMJJ_RS07275 -3.9 -1.9 formate--phosphoribosylaminoimidazolecarboxamide ligase compare
MMJJ_RS06600 -3.7 -2.2 DUF555 domain-containing protein compare
MMJJ_RS05490 -3.6 -1.7 imidazole glycerol phosphate synthase subunit HisF compare
MMJJ_RS09175 -3.5 -0.8 anthranilate synthase component I compare
MMJJ_RS01870 -3.5 -1.3 methanogenesis marker 15 protein compare
MMJJ_RS03840 -3.4 -2.0 DHH family phosphoesterase compare
MMJJ_RS02275 -3.1 -3.1 nucleotidyltransferase domain-containing protein compare
MMJJ_RS01935 -3.0 -3.0 O-phosphoseryl-tRNA(Sec) selenium transferase compare
MMJJ_RS03760 -2.9 -2.7 hydrogenase maturation nickel metallochaperone HypA compare
MMJJ_RS03225 -2.8 -2.6 4Fe-4S binding protein compare
MMJJ_RS05620 -2.8 -4.0 CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein compare
MMJJ_RS01355 -2.8 -2.4 UDP-N-acetyl-D-mannosamine dehydrogenase compare
MMJJ_RS05650 -2.7 -1.2 formylmethanofuran dehydrogenase subunit B compare
MMJJ_RS04670 -2.6 -5.1 DUF2117 domain-containing protein compare
MMJJ_RS08095 -2.6 -3.2 cobyric acid synthase CobQ compare
MMJJ_RS05995 -2.5 -1.6 ATP-binding cassette domain-containing protein compare
MMJJ_RS06885 -2.5 -1.8 EhaF family protein compare
MMJJ_RS07430 -2.5 -2.0 ribonuclease VapC compare
MMJJ_RS03895 -2.5 -2.1 hydrogenase expression/formation protein HypE compare
MMJJ_RS08660 -2.4 -2.2 acetylornithine transaminase compare
MMJJ_RS00560 -2.3 -2.3 homoisocitrate dehydrogenase compare
MMJJ_RS00600 -2.3 -1.5 hydroxymethylbilane synthase compare
MMJJ_RS07190 -2.3 -2.9 RtcB family protein compare
MMJJ_RS08810 -2.3 -0.9 DUF4040 domain-containing protein compare
MMJJ_RS08230 -2.3 -2.4 ribose-5-phosphate isomerase RpiA compare
MMJJ_RS07785 -2.3 -1.8 fumarate reductase subunit A compare
MMJJ_RS07950 -2.2 -1.6 4Fe-4S binding protein compare
MMJJ_RS03190 -2.2 -1.8 phosphopyruvate hydratase compare
MMJJ_RS01750 -2.1 -1.4 ferrous iron transport protein A compare
MMJJ_RS00125 -2.1 -1.7 KEOPS complex subunit Cgi121 compare
MMJJ_RS03845 -2.1 -3.5 translation initiation factor IF-2 compare
MMJJ_RS08170 -2.0 -1.7 diaminopimelate decarboxylase compare
MMJJ_RS08840 -1.9 -2.3 calcium/sodium antiporter compare
MMJJ_RS03240 -1.9 -1.3 histone family protein compare
MMJJ_RS06485 -1.9 -1.6 phosphoglycerate kinase compare
MMJJ_RS04985 -1.9 -3.0 glutamyl-tRNA reductase compare
MMJJ_RS07840 -1.8 -1.7 Glu-tRNA(Gln) amidotransferase subunit GatD compare
MMJJ_RS08155 -1.8 -1.7 cobalt-precorrin-5B (C(1))-methyltransferase CbiD compare
MMJJ_RS04730 -1.8 -1.5 tyrosine decarboxylase MfnA compare
MMJJ_RS05590 -1.8 -1.0 homoserine dehydrogenase compare
MMJJ_RS06760 -1.8 -2.8 Ni-sirohydrochlorin a,c-diamide synthase compare
MMJJ_RS06250 -1.8 -1.3 nicotinamide-nucleotide adenylyltransferase compare
MMJJ_RS06705 -1.8 -2.1 bifunctional NADP phosphatase/NAD kinase compare
MMJJ_RS06880 -1.8 -1.1 EhaG family protein compare
MMJJ_RS08725 -1.8 -6.8 flippase compare
MMJJ_RS07170 -1.7 -2.7 pyridoxal phosphate-dependent aminotransferase compare
MMJJ_RS07705 -1.7 -1.6 GTP-binding protein EngB compare
MMJJ_RS04155 -1.7 -2.9 hypothetical protein compare
MMJJ_RS01830 -1.7 -1.9 tRNA(Ile)(2)-agmatinylcytidine synthase compare
MMJJ_RS03230 -1.7 -1.8 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS03110 -1.7 -1.7 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase compare
MMJJ_RS08335 -1.7 -1.5 ABC transporter ATP-binding protein compare
MMJJ_RS08710 -1.6 -4.6 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMJJ_RS08720 -1.6 -6.4 UDP-glucose/GDP-mannose dehydrogenase family protein compare
MMJJ_RS04675 -1.6 -2.8 thiamine pyrophosphate-binding protein compare
MMJJ_RS03965 -1.6 -0.8 DNA-directed RNA polymerase subunit L compare
MMJJ_RS05720 -1.5 -1.3 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMJJ_RS07960 -1.5 -1.4 quinolinate synthase NadA compare
MMJJ_RS06270 -1.5 -3.1 dethiobiotin synthase compare
MMJJ_RS08795 -1.5 -1.1 phosphoglucosamine mutase compare
MMJJ_RS06930 -1.5 -1.0 type II methionyl aminopeptidase compare
MMJJ_RS01755 -1.5 -1.0 ferrous iron transport protein B compare
MMJJ_RS08870 -1.5 -0.8 2-isopropylmalate synthase compare
MMJJ_RS06625 -1.5 -1.0 pyruvate synthase subunit PorB compare
MMJJ_RS05415 -1.5 -1.1 hypothetical protein compare
MMJJ_RS01880 -1.5 -1.3 RlmE family RNA methyltransferase compare
MMJJ_RS07030 -1.5 -8.7 hypothetical protein compare
MMJJ_RS06255 -1.5 -2.6 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 compare
MMJJ_RS00425 -1.5 -1.6 hypothetical protein compare
MMJJ_RS04770 -1.4 -1.8 formate-dependent phosphoribosylglycinamide formyltransferase compare
MMJJ_RS08715 -1.4 -4.1 NAD-dependent epimerase/dehydratase family protein compare
MMJJ_RS08080 -1.4 -3.1 TIGR00300 family protein compare
MMJJ_RS08055 -1.3 -2.9 methanogenesis marker 14 protein compare
MMJJ_RS02045 -1.3 -1.1 molybdenum cofactor guanylyltransferase compare
MMJJ_RS08760 -1.3 -5.5 glycosyltransferase family 9 protein compare
MMJJ_RS04995 -1.3 -2.0 Tfx family DNA-binding protein compare
MMJJ_RS04620 -1.3 -1.2 homocitrate synthase family protein compare
MMJJ_RS00580 -1.3 -0.8 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG compare
MMJJ_RS03005 -1.3 -1.3 Ni-sirohydrochlorin a,c-diamide reductive cyclase catalytic subunit compare
MMJJ_RS01600 -1.3 -0.9 radical SAM protein compare
MMJJ_RS05780 -1.3 -1.5 flagellin compare
MMJJ_RS08780 -1.2 -3.8 D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase compare
MMJJ_RS01475 -1.2 -0.8 signal recognition particle-docking protein FtsY compare
MMJJ_RS04050 -1.2 -0.8 dihydroneopterin aldolase family protein compare
MMJJ_RS05765 -1.2 -0.7 flagellar protein E compare
MMJJ_RS07410 -1.2 -1.6 methanogenesis marker protein Mmp4/MtxX compare
MMJJ_RS04615 -1.2 -1.4 methanogenesis marker 3 protein compare
MMJJ_RS06110 -1.2 -0.8 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC compare
MMJJ_RS06180 -1.2 -0.9 tryptophan--tRNA ligase compare
MMJJ_RS04935 -1.2 -2.1 4Fe-4S binding protein compare
MMJJ_RS07995 -1.2 -2.0 molybdenum cofactor biosynthesis protein MoaE compare
MMJJ_RS08750 -1.2 -6.6 glycosyltransferase compare
MMJJ_RS07680 -1.1 -4.7 glucose-6-phosphate isomerase compare
MMJJ_RS01860 -1.1 -3.8 tRNA guanosine(15) transglycosylase TgtA compare
MMJJ_RS05575 -1.1 -1.1 2-amino-5-formylamino-6-ribosylaminopyrimidin- 4(3H)-one 5'-monophosphate deformylase compare
MMJJ_RS08730 -1.1 -5.9 glycosyltransferase family 4 protein compare
MMJJ_RS07000 -1.1 -0.7 TrkH family potassium uptake protein compare
MMJJ_RS06185 -1.0 -1.6 cobalamin biosynthesis protein compare
MMJJ_RS08775 -1.0 -5.9 PfkB family carbohydrate kinase compare
MMJJ_RS07035 -1.0 -1.0 glycosyl transferase compare
MMJJ_RS08770 -1.0 -3.2 HAD family hydrolase compare
MMJJ_RS03670 -1.0 -1.4 precorrin-2 C(20)-methyltransferase compare
MMJJ_RS02200 -1.0 -2.1 chorismate pyruvate-lyase family protein compare
MMJJ_RS06380 -1.0 -1.7 signal recognition particle protein Srp54 compare
MMJJ_RS03150 -1.0 -1.6 2-phospho-L-lactate transferase compare
MMJJ_RS04685 -1.0 -2.1 carbamoyltransferase HypF compare
MMJJ_RS03615 -1.0 -0.8 cobalt-precorrin-8 methylmutase compare
MMJJ_RS06865 -1.0 -1.7 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS08785 -1.0 -4.0 D-sedoheptulose 7-phosphate isomerase compare
MMJJ_RS05360 -1.0 -1.5 nickel-responsive transcriptional regulator NikR compare
MMJJ_RS04520 -1.0 -1.4 coenzyme F430 synthase compare
MMJJ_RS04360 -1.0 -3.5 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS05295 -0.9 -3.2 cobyrinic acid a,c-diamide synthase compare
MMJJ_RS07725 -0.9 -1.5 DNA primase DnaG compare
MMJJ_RS01815 -0.9 -1.4 DUF134 domain-containing protein compare
MMJJ_RS06905 -0.9 -0.9 hypothetical protein compare
MMJJ_RS04980 -0.9 -1.2 bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase compare
MMJJ_RS05655 -0.9 -1.7 HisA/HisF family protein compare
MMJJ_RS00415 -0.9 -2.3 DedA family protein compare
MMJJ_RS03820 -0.9 -1.0 hydrogenase formation protein HypD compare
MMJJ_RS01345 -0.9 -1.4 (5-formylfuran-3-yl)methyl phosphate synthase compare
MMJJ_RS03270 -0.9 -0.6 ribosome biogenesis/translation initiation ATPase RLI compare
MMJJ_RS08765 -0.9 -4.9 glycosyltransferase family 9 protein compare
MMJJ_RS01010 -0.9 -7.6 right-handed parallel beta-helix repeat-containing protein compare
MMJJ_RS07360 -0.8 -0.5 TIGR00269 family protein compare
MMJJ_RS05645 -0.8 -1.6 4Fe-4S binding protein compare
MMJJ_RS01825 -0.8 -3.1 DNA repair and recombination protein RadB compare
MMJJ_RS04110 -0.8 -2.3 hypothetical protein compare
MMJJ_RS06725 -0.8 -2.6 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMJJ_RS09035 -0.8 -1.8 OB-fold nucleic acid binding domain-containing protein compare
MMJJ_RS07040 -0.8 -0.5 preprotein translocase subunit SecY compare
MMJJ_RS05070 -0.8 -0.5 DNA primase catalytic subunit PriS compare
MMJJ_RS06155 -0.8 -1.3 phosphatidylglycerophosphatase A compare
MMJJ_RS03095 -0.8 -0.6 bifunctional N(6)-L-threonylcarbamoyladenine synthase/serine/threonine protein kinase compare
MMJJ_RS05260 -0.8 -1.4 ATP-grasp domain-containing protein compare
MMJJ_RS06480 -0.8 -3.9 hypothetical protein compare
MMJJ_RS08615 -0.8 -2.8 oligosaccharide repeat unit polymerase family protein compare
MMJJ_RS07630 -0.8 -3.0 hypothetical protein compare
MMJJ_RS05785 -0.8 -3.4 flagellin compare
MMJJ_RS04720 -0.8 -1.1 IMP dehydrogenase compare
MMJJ_RS04565 -0.8 -1.0 sirohydrochlorin nickelochelatase compare
MMJJ_RS03620 -0.7 -1.2 DUF2097 domain-containing protein compare
MMJJ_RS00215 -0.7 -0.6 CCA tRNA nucleotidyltransferase compare
MMJJ_RS07935 -0.7 -0.9 protein fwdD compare
MMJJ_RS00180 -0.7 -2.3 DNA topoisomerase I compare
MMJJ_RS05750 -0.7 -4.3 flagellar accessory protein FlaH compare
MMJJ_RS05790 -0.7 -2.9 flagellin compare
MMJJ_RS06575 -0.7 -0.8 prephenate dehydrogenase compare
MMJJ_RS07005 -0.7 -2.3 transcription factor S compare
MMJJ_RS00450 -0.7 -0.4 DUF126 domain-containing protein compare
MMJJ_RS06210 -0.7 -3.7 hypothetical protein compare
MMJJ_RS04595 -0.7 -1.1 hypothetical protein compare
MMJJ_RS06840 -0.7 -1.1 nickel-dependent hydrogenase large subunit compare
MMJJ_RS02140 -0.7 -3.2 preflagellin peptidase FlaK compare
MMJJ_RS04505 -0.7 -1.2 CDC48 family AAA ATPase compare
MMJJ_RS06565 -0.7 -2.1 segregation/condensation protein A compare
MMJJ_RS09335 -0.7 -2.3 hypothetical protein compare
MMJJ_RS07165 -0.7 -4.2 chromosome segregation protein SMC compare
MMJJ_RS08620 -0.7 -1.1 DUF373 family protein compare
MMJJ_RS01590 -0.7 -0.6 adenine phosphoribosyltransferase compare
MMJJ_RS05745 -0.7 -4.2 type II/IV secretion system ATPase subunit compare
MMJJ_RS04575 -0.7 -2.2 DUF116 domain-containing protein compare
MMJJ_RS08065 -0.7 -0.9 precorrin-6Y C5,15-methyltransferase (decarboxylating) subunit CbiT compare
MMJJ_RS05330 -0.7 -0.6 DNA polymerase II large subunit compare
MMJJ_RS05740 -0.6 -4.0 archaellar assembly protein FlaJ compare
MMJJ_RS09055 -0.6 -2.5 NFACT family protein compare
MMJJ_RS08330 -0.6 -0.7 SufD family Fe-S cluster assembly protein compare
MMJJ_RS03195 -0.6 -1.5 hypothetical protein compare
MMJJ_RS09390 -0.6 -1.5 hypothetical protein compare
MMJJ_RS08190 -0.6 -1.2 hypothetical protein compare
MMJJ_RS04870 -0.6 -0.6 tRNA-Asp compare
MMJJ_RS00205 -0.6 -0.9 adenosylcobinamide-phosphate synthase CbiB compare
MMJJ_RS03155 -0.6 -2.4 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in attachment assay; attached sample experiments