Experiment set6S686 for Methanococcus maripaludis JJ

Compare to:

McCas-formate glass attached

200 most important genes:

  gene name fitness t score description  
MMJJ_RS01810 -6.7 -1.9 methyl coenzyme M reductase system, component A2 compare
MMJJ_RS03055 -5.6 -2.1 hypothetical protein compare
MMJJ_RS07360 -5.6 -1.6 TIGR00269 family protein compare
MMJJ_RS09375 -5.5 -1.6 hypothetical protein compare
MMJJ_RS06750 -5.2 -1.9 homoaconitase large subunit compare
MMJJ_RS06930 -5.1 -2.1 type II methionyl aminopeptidase compare
MMJJ_RS08535 -5.1 -2.4 NOL1/NOP2/sun family putative RNA methylase compare
MMJJ_RS06240 -5.0 -2.0 dihydropteroate synthase-like protein compare
MMJJ_RS05445 -4.8 -1.6 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMJJ_RS09190 -4.8 -1.4 tryptophan synthase subunit beta compare
MMJJ_RS07000 -4.7 -1.6 TrkH family potassium uptake protein compare
MMJJ_RS00215 -4.7 -1.9 CCA tRNA nucleotidyltransferase compare
MMJJ_RS01355 -4.6 -2.4 UDP-N-acetyl-D-mannosamine dehydrogenase compare
MMJJ_RS01750 -4.6 -1.9 ferrous iron transport protein A compare
MMJJ_RS05765 -4.5 -1.1 flagellar protein E compare
MMJJ_RS05930 -4.5 -1.7 cell division protein SepF compare
MMJJ_RS03785 -4.5 -2.0 hypothetical protein compare
MMJJ_RS06110 -4.4 -1.8 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC compare
MMJJ_RS05415 -4.3 -1.6 hypothetical protein compare
MMJJ_RS06625 -4.3 -1.4 pyruvate synthase subunit PorB compare
MMJJ_RS02920 -4.2 -1.4 30S ribosomal protein S27ae compare
MMJJ_RS01755 -4.1 -1.8 ferrous iron transport protein B compare
MMJJ_RS00125 -4.0 -1.8 KEOPS complex subunit Cgi121 compare
MMJJ_RS00275 -4.0 -1.5 coenzyme F420-0:L-glutamate ligase compare
MMJJ_RS01600 -3.9 -1.7 radical SAM protein compare
MMJJ_RS04200 -3.8 -5.2 triphosphoribosyl-dephospho-CoA synthase compare
MMJJ_RS06485 -3.8 -1.8 phosphoglycerate kinase compare
MMJJ_RS05620 -3.7 -2.6 CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein compare
MMJJ_RS09175 -3.5 -0.8 anthranilate synthase component I compare
MMJJ_RS08095 -3.3 -3.5 cobyric acid synthase CobQ compare
MMJJ_RS04155 -3.1 -5.9 hypothetical protein compare
MMJJ_RS03840 -2.9 -2.9 DHH family phosphoesterase compare
MMJJ_RS05650 -2.8 -1.3 formylmethanofuran dehydrogenase subunit B compare
MMJJ_RS00355 -2.7 -2.1 ribonuclease P protein component 4 compare
MMJJ_RS03230 -2.6 -2.4 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS07875 -2.6 -2.0 FAD-dependent oxidoreductase compare
MMJJ_RS04730 -2.5 -2.1 tyrosine decarboxylase MfnA compare
MMJJ_RS05610 -2.5 -3.2 CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMJJ_RS01200 -2.4 -2.0 PRC-barrel domain-containing protein compare
MMJJ_RS05995 -2.3 -1.5 ATP-binding cassette domain-containing protein compare
MMJJ_RS08840 -2.2 -2.4 calcium/sodium antiporter compare
MMJJ_RS06840 -2.2 -2.6 nickel-dependent hydrogenase large subunit compare
MMJJ_RS07470 -2.2 -1.3 50S ribosome-binding GTPase compare
MMJJ_RS00425 -2.1 -3.0 hypothetical protein compare
MMJJ_RS08660 -2.1 -1.9 acetylornithine transaminase compare
MMJJ_RS08320 -2.0 -1.6 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
MMJJ_RS05490 -2.0 -1.7 imidazole glycerol phosphate synthase subunit HisF compare
MMJJ_RS08055 -2.0 -4.7 methanogenesis marker 14 protein compare
MMJJ_RS05720 -1.9 -1.7 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMJJ_RS06885 -1.9 -1.7 EhaF family protein compare
MMJJ_RS03760 -1.9 -1.6 hydrogenase maturation nickel metallochaperone HypA compare
MMJJ_RS03995 -1.9 -3.4 PHP domain-containing protein compare
MMJJ_RS05655 -1.8 -3.6 HisA/HisF family protein compare
MMJJ_RS00205 -1.8 -2.5 adenosylcobinamide-phosphate synthase CbiB compare
MMJJ_RS06040 -1.8 -2.0 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS05260 -1.8 -2.9 ATP-grasp domain-containing protein compare
MMJJ_RS07705 -1.8 -1.6 GTP-binding protein EngB compare
MMJJ_RS06255 -1.7 -3.6 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 compare
MMJJ_RS07725 -1.7 -2.7 DNA primase DnaG compare
MMJJ_RS06695 -1.7 -1.2 amidohydrolase compare
MMJJ_RS07245 -1.7 -2.2 amidohydrolase family protein compare
MMJJ_RS05810 -1.6 -2.9 precorrin-4 C(11)-methyltransferase compare
MMJJ_RS06250 -1.6 -1.1 nicotinamide-nucleotide adenylyltransferase compare
MMJJ_RS04700 -1.6 -2.8 deoxyhypusine synthase compare
MMJJ_RS00430 -1.6 -1.7 ribonuclease Z compare
MMJJ_RS04615 -1.5 -1.7 methanogenesis marker 3 protein compare
MMJJ_RS08330 -1.5 -1.7 SufD family Fe-S cluster assembly protein compare
MMJJ_RS01210 -1.5 -2.3 hypothetical protein compare
MMJJ_RS04475 -1.5 -2.7 3,4-dihydroxy-2-butanone-4-phosphate synthase compare
MMJJ_RS05380 -1.5 -0.8 hypothetical protein compare
MMJJ_RS00370 -1.4 -1.0 asparagine synthase (glutamine-hydrolyzing) compare
MMJJ_RS06875 -1.4 -1.0 hypothetical protein compare
MMJJ_RS07945 -1.4 -1.2 4Fe-4S binding protein compare
MMJJ_RS01360 -1.4 -1.0 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMJJ_RS06865 -1.3 -2.5 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS04675 -1.3 -2.9 thiamine pyrophosphate-binding protein compare
MMJJ_RS00360 -1.3 -1.1 adenosylhomocysteinase compare
MMJJ_RS03585 -1.3 -1.0 methanogenesis marker 6 protein compare
MMJJ_RS01865 -1.3 -2.0 peptidyl-tRNA hydrolase Pth2 compare
MMJJ_RS04685 -1.3 -2.7 carbamoyltransferase HypF compare
MMJJ_RS08780 -1.3 -3.7 D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase compare
MMJJ_RS05950 -1.2 -1.2 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
MMJJ_RS06700 -1.2 -1.6 L-seryl-tRNA(Sec) kinase compare
MMJJ_RS04620 -1.2 -1.2 homocitrate synthase family protein compare
MMJJ_RS06225 -1.2 -0.8 adenosylmethionine decarboxylase compare
MMJJ_RS06180 -1.2 -1.0 tryptophan--tRNA ligase compare
MMJJ_RS05820 -1.2 -3.3 DUF2304 domain-containing protein compare
MMJJ_RS02045 -1.2 -1.0 molybdenum cofactor guanylyltransferase compare
MMJJ_RS03580 -1.1 -1.1 TIGR00303 family protein compare
MMJJ_RS04360 -1.1 -4.9 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS08155 -1.1 -1.6 cobalt-precorrin-5B (C(1))-methyltransferase CbiD compare
MMJJ_RS01870 -1.1 -0.9 methanogenesis marker 15 protein compare
MMJJ_RS01415 -1.1 -0.9 beta-CASP ribonuclease aCPSF1 compare
MMJJ_RS08850 -1.1 -0.8 succinate dehydrogenase/fumarate reductase iron-sulfur subunit compare
MMJJ_RS06575 -1.1 -1.7 prephenate dehydrogenase compare
MMJJ_RS00475 -1.1 -1.0 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
MMJJ_RS04875 -1.0 -0.9 tRNA-Lys compare
MMJJ_RS03380 -1.0 -2.3 hypothetical protein compare
MMJJ_RS08795 -1.0 -0.7 phosphoglucosamine mutase compare
MMJJ_RS06175 -1.0 -0.9 DUF1743 domain-containing protein compare
MMJJ_RS03820 -1.0 -1.2 hydrogenase formation protein HypD compare
MMJJ_RS06725 -1.0 -3.5 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMJJ_RS04565 -1.0 -0.9 sirohydrochlorin nickelochelatase compare
MMJJ_RS08250 -1.0 -1.8 hydrogenase maturation peptidase HycI compare
MMJJ_RS07950 -1.0 -0.6 4Fe-4S binding protein compare
MMJJ_RS03895 -1.0 -0.9 hydrogenase expression/formation protein HypE compare
MMJJ_RS04655 -1.0 -1.5 FAD-dependent oxidoreductase compare
MMJJ_RS04150 -1.0 -1.1 DUF5379 domain-containing protein compare
MMJJ_RS06375 -1.0 -2.3 UbiX family flavin prenyltransferase compare
MMJJ_RS07455 -0.9 -1.6 coenzyme F420-reducing hydrogenase, FrhD protein compare
MMJJ_RS08715 -0.9 -4.1 NAD-dependent epimerase/dehydratase family protein compare
MMJJ_RS04050 -0.9 -0.6 dihydroneopterin aldolase family protein compare
MMJJ_RS00180 -0.9 -3.8 DNA topoisomerase I compare
MMJJ_RS07380 -0.9 -2.0 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMJJ_RS04980 -0.9 -1.3 bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase compare
MMJJ_RS07720 -0.9 -0.5 UPF0058 family protein compare
MMJJ_RS05645 -0.9 -1.3 4Fe-4S binding protein compare
MMJJ_RS03155 -0.9 -3.6 hypothetical protein compare
MMJJ_RS06490 -0.9 -0.7 methanogenesis marker 2 protein compare
MMJJ_RS03965 -0.9 -0.7 DNA-directed RNA polymerase subunit L compare
MMJJ_RS07030 -0.9 -5.6 hypothetical protein compare
MMJJ_RS08625 -0.9 -1.6 magnesium/cobalt transporter CorA compare
MMJJ_RS06855 -0.9 -0.6 DUF2104 domain-containing protein compare
MMJJ_RS06510 -0.9 -0.8 LL-diaminopimelate aminotransferase compare
MMJJ_RS08750 -0.9 -5.3 glycosyltransferase compare
MMJJ_RS07040 -0.8 -0.5 preprotein translocase subunit SecY compare
MMJJ_RS04800 -0.8 -1.3 2-phospho-L-lactate guanylyltransferase compare
MMJJ_RS04505 -0.8 -1.8 CDC48 family AAA ATPase compare
MMJJ_RS01825 -0.8 -2.5 DNA repair and recombination protein RadB compare
MMJJ_RS04650 -0.8 -1.4 nitrogenase iron protein compare
MMJJ_RS04935 -0.8 -2.6 4Fe-4S binding protein compare
MMJJ_RS02090 -0.8 -1.0 tyramine--L-glutamate ligase compare
MMJJ_RS03660 -0.8 -0.8 DUF447 family protein compare
MMJJ_RS08325 -0.8 -1.0 glycosyltransferase family 2 protein compare
MMJJ_RS06910 -0.8 -0.7 energy-converting NiFe hydrogenase A subunit EhaA compare
MMJJ_RS01690 -0.8 -0.8 methanogenesis marker 12 protein compare
MMJJ_RS08760 -0.8 -4.1 glycosyltransferase family 9 protein compare
MMJJ_RS09130 -0.8 -0.4 NFYB/HAP3 family transcription factor subunit compare
MMJJ_RS01010 -0.8 -6.7 right-handed parallel beta-helix repeat-containing protein compare
MMJJ_RS00450 -0.8 -0.5 DUF126 domain-containing protein compare
MMJJ_RS08730 -0.8 -4.7 glycosyltransferase family 4 protein compare
MMJJ_RS08765 -0.8 -4.6 glycosyltransferase family 9 protein compare
MMJJ_RS08830 -0.8 -1.8 hypothetical protein compare
MMJJ_RS06860 -0.7 -1.0 hypothetical protein compare
MMJJ_RS03200 -0.7 -0.6 uroporphyrinogen-III synthase compare
MMJJ_RS03190 -0.7 -0.7 phosphopyruvate hydratase compare
MMJJ_RS03005 -0.7 -0.8 Ni-sirohydrochlorin a,c-diamide reductive cyclase catalytic subunit compare
MMJJ_RS08725 -0.7 -3.3 flippase compare
MMJJ_RS06200 -0.7 -0.8 phosphoglycerate dehydrogenase compare
MMJJ_RS08720 -0.7 -4.0 UDP-glucose/GDP-mannose dehydrogenase family protein compare
MMJJ_RS07490 -0.7 -1.2 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMJJ_RS08775 -0.7 -4.0 PfkB family carbohydrate kinase compare
MMJJ_RS03865 -0.7 -0.5 phosphoribosyl-AMP cyclohydrolase compare
MMJJ_RS06215 -0.7 -0.9 agmatinase compare
MMJJ_RS07680 -0.7 -2.7 glucose-6-phosphate isomerase compare
MMJJ_RS08710 -0.7 -2.2 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMJJ_RS04520 -0.7 -1.2 coenzyme F430 synthase compare
MMJJ_RS00210 -0.7 -0.7 DUF530 family protein compare
MMJJ_RS05360 -0.7 -1.9 nickel-responsive transcriptional regulator NikR compare
MMJJ_RS05790 -0.7 -2.9 flagellin compare
MMJJ_RS05590 -0.7 -0.4 homoserine dehydrogenase compare
MMJJ_RS03240 -0.7 -0.7 histone family protein compare
MMJJ_RS00420 -0.7 -2.3 CBS domain-containing protein compare
MMJJ_RS00400 -0.7 -1.8 tautomerase family protein compare
MMJJ_RS05160 -0.6 -0.8 RNA-binding protein compare
MMJJ_RS05535 -0.6 -2.3 hypothetical protein compare
MMJJ_RS08770 -0.6 -2.4 HAD family hydrolase compare
MMJJ_RS03125 -0.6 -1.0 GMC oxidoreductase compare
MMJJ_RS01960 -0.6 -2.1 glycosyltransferase family 2 protein compare
MMJJ_RS07375 -0.6 -1.7 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMJJ_RS00500 -0.6 -2.3 GNAT family N-acetyltransferase compare
MMJJ_RS02275 -0.6 -0.8 nucleotidyltransferase domain-containing protein compare
MMJJ_RS05710 -0.6 -0.9 single-stranded-DNA-specific exonuclease RecJ compare
MMJJ_RS07635 -0.6 -3.1 response regulator transcription factor compare
MMJJ_RS08130 -0.6 -0.4 translation initiation factor IF-2 subunit gamma compare
MMJJ_RS03110 -0.6 -0.6 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase compare
MMJJ_RS04680 -0.6 -1.7 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMJJ_RS05510 -0.6 -3.6 archaellum operon transcriptional activator EarA family protein compare
MMJJ_RS06605 -0.6 -1.2 DUF357 domain-containing protein compare
MMJJ_RS06020 -0.6 -1.1 hypothetical protein compare
MMJJ_RS07640 -0.6 -4.4 cache domain-containing protein compare
MMJJ_RS01875 -0.6 -1.0 global nitrogen regulator NrpR compare
MMJJ_RS04770 -0.6 -0.7 formate-dependent phosphoribosylglycinamide formyltransferase compare
MMJJ_RS08040 -0.6 -3.6 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS08080 -0.6 -1.4 TIGR00300 family protein compare
MMJJ_RS06975 -0.6 -1.2 protein translocase SEC61 complex subunit gamma compare
MMJJ_RS07275 -0.6 -0.6 formate--phosphoribosylaminoimidazolecarboxamide ligase compare
MMJJ_RS01930 -0.6 -1.7 Pre-mRNA processing ribonucleoprotein compare
MMJJ_RS06210 -0.6 -2.6 hypothetical protein compare
MMJJ_RS03060 -0.6 -0.5 methanogenesis marker 7 protein compare
MMJJ_RS04040 -0.6 -2.2 prefoldin subunit beta compare
MMJJ_RS03350 -0.6 -1.0 hypothetical protein compare
MMJJ_RS08785 -0.5 -2.4 D-sedoheptulose 7-phosphate isomerase compare
MMJJ_RS00300 -0.5 -2.3 chemotaxis protein CheC compare
MMJJ_RS01860 -0.5 -2.4 tRNA guanosine(15) transglycosylase TgtA compare
MMJJ_RS06830 -0.5 -2.2 4Fe-4S binding protein compare
MMJJ_RS06940 -0.5 -2.4 metalloregulator ArsR/SmtB family transcription factor compare
MMJJ_RS06760 -0.5 -0.8 Ni-sirohydrochlorin a,c-diamide synthase compare
MMJJ_RS05295 -0.5 -2.0 cobyrinic acid a,c-diamide synthase compare
MMJJ_RS04145 -0.5 -1.3 glutamate-1-semialdehyde 2,1-aminomutase compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in attachment assay; attached sample experiments