Experiment set6S685 for Methanococcus maripaludis JJ

Compare to:

McCas-formate glass attached

200 most important genes:

  gene name fitness t score description  
MMJJ_RS00570 -5.7 -1.3 ribonuclease P compare
MMJJ_RS08130 -5.7 -0.8 translation initiation factor IF-2 subunit gamma compare
MMJJ_RS07360 -5.7 -1.3 TIGR00269 family protein compare
MMJJ_RS08325 -5.7 -1.7 glycosyltransferase family 2 protein compare
MMJJ_RS07415 -5.7 -1.8 polyprenyl diphosphate synthase compare
MMJJ_RS04970 -5.6 -1.5 DUF655 domain-containing protein compare
MMJJ_RS07720 -5.2 -1.4 UPF0058 family protein compare
MMJJ_RS08320 -5.2 -1.5 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
MMJJ_RS05720 -5.0 -1.8 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMJJ_RS07000 -4.9 -1.3 TrkH family potassium uptake protein compare
MMJJ_RS09190 -4.9 -1.1 tryptophan synthase subunit beta compare
MMJJ_RS06175 -4.8 -1.4 DUF1743 domain-containing protein compare
MMJJ_RS00450 -4.8 -1.3 DUF126 domain-containing protein compare
MMJJ_RS05445 -4.8 -1.3 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMJJ_RS06250 -4.8 -1.7 nicotinamide-nucleotide adenylyltransferase compare
MMJJ_RS05995 -4.8 -1.4 ATP-binding cassette domain-containing protein compare
MMJJ_RS01360 -4.8 -1.6 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMJJ_RS08935 -4.7 -0.9 TIGR00288 family NYN domain-containing protein compare
MMJJ_RS00370 -4.7 -1.3 asparagine synthase (glutamine-hydrolyzing) compare
MMJJ_RS08795 -4.6 -1.6 phosphoglucosamine mutase compare
MMJJ_RS03615 -4.6 -1.6 cobalt-precorrin-8 methylmutase compare
MMJJ_RS01405 -4.5 -0.8 proline--tRNA ligase compare
MMJJ_RS05930 -4.5 -1.3 cell division protein SepF compare
MMJJ_RS05765 -4.5 -0.8 flagellar protein E compare
MMJJ_RS06110 -4.5 -1.5 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC compare
MMJJ_RS05380 -4.4 -0.8 hypothetical protein compare
MMJJ_RS06625 -4.4 -1.2 pyruvate synthase subunit PorB compare
MMJJ_RS05950 -4.4 -1.7 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
MMJJ_RS05415 -4.4 -1.3 hypothetical protein compare
MMJJ_RS01415 -4.3 -1.4 beta-CASP ribonuclease aCPSF1 compare
MMJJ_RS03200 -4.3 -1.3 uroporphyrinogen-III synthase compare
MMJJ_RS02920 -4.3 -1.1 30S ribosomal protein S27ae compare
MMJJ_RS05590 -4.2 -1.1 homoserine dehydrogenase compare
MMJJ_RS07945 -4.1 -1.5 4Fe-4S binding protein compare
MMJJ_RS03820 -4.1 -1.9 hydrogenase formation protein HypD compare
MMJJ_RS01600 -4.0 -1.4 radical SAM protein compare
MMJJ_RS08330 -4.0 -2.1 SufD family Fe-S cluster assembly protein compare
MMJJ_RS06485 -3.8 -1.4 phosphoglycerate kinase compare
MMJJ_RS03580 -3.7 -1.4 TIGR00303 family protein compare
MMJJ_RS05490 -3.7 -1.4 imidazole glycerol phosphate synthase subunit HisF compare
MMJJ_RS01870 -3.6 -1.1 methanogenesis marker 15 protein compare
MMJJ_RS06840 -3.5 -1.6 nickel-dependent hydrogenase large subunit compare
MMJJ_RS03840 -3.5 -1.7 DHH family phosphoesterase compare
MMJJ_RS03225 -3.4 -2.7 4Fe-4S binding protein compare
MMJJ_RS06490 -3.3 -1.1 methanogenesis marker 2 protein compare
MMJJ_RS05780 -3.1 -2.4 flagellin compare
MMJJ_RS05575 -3.1 -2.9 2-amino-5-formylamino-6-ribosylaminopyrimidin- 4(3H)-one 5'-monophosphate deformylase compare
MMJJ_RS04200 -3.1 -3.7 triphosphoribosyl-dephospho-CoA synthase compare
MMJJ_RS06575 -3.0 -3.5 prephenate dehydrogenase compare
MMJJ_RS03660 -2.9 -2.7 DUF447 family protein compare
MMJJ_RS03230 -2.9 -2.5 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS06375 -2.8 -2.6 UbiX family flavin prenyltransferase compare
MMJJ_RS08155 -2.8 -2.4 cobalt-precorrin-5B (C(1))-methyltransferase CbiD compare
MMJJ_RS05710 -2.7 -3.6 single-stranded-DNA-specific exonuclease RecJ compare
MMJJ_RS06910 -2.7 -2.3 energy-converting NiFe hydrogenase A subunit EhaA compare
MMJJ_RS04985 -2.7 -3.4 glutamyl-tRNA reductase compare
MMJJ_RS06855 -2.6 -1.3 DUF2104 domain-containing protein compare
MMJJ_RS04685 -2.6 -5.3 carbamoyltransferase HypF compare
MMJJ_RS03110 -2.6 -2.2 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase compare
MMJJ_RS02275 -2.3 -2.1 nucleotidyltransferase domain-containing protein compare
MMJJ_RS01200 -2.3 -1.9 PRC-barrel domain-containing protein compare
MMJJ_RS03125 -2.3 -2.2 GMC oxidoreductase compare
MMJJ_RS03815 -2.3 -1.1 nascent polypeptide-associated complex protein compare
MMJJ_RS05260 -2.2 -3.7 ATP-grasp domain-containing protein compare
MMJJ_RS03670 -2.1 -2.5 precorrin-2 C(20)-methyltransferase compare
MMJJ_RS05810 -2.1 -3.5 precorrin-4 C(11)-methyltransferase compare
MMJJ_RS00560 -2.1 -1.6 homoisocitrate dehydrogenase compare
MMJJ_RS08855 -2.0 -1.3 cyclic pyranopterin monophosphate synthase MoaC compare
MMJJ_RS03785 -2.0 -1.4 hypothetical protein compare
MMJJ_RS03650 -2.0 -3.4 class I SAM-dependent methyltransferase family protein compare
MMJJ_RS04675 -2.0 -4.1 thiamine pyrophosphate-binding protein compare
MMJJ_RS07410 -1.9 -2.1 methanogenesis marker protein Mmp4/MtxX compare
MMJJ_RS07505 -1.9 -0.7 DNA-directed RNA polymerase subunit K compare
MMJJ_RS04770 -1.9 -2.4 formate-dependent phosphoribosylglycinamide formyltransferase compare
MMJJ_RS03845 -1.9 -2.8 translation initiation factor IF-2 compare
MMJJ_RS06700 -1.9 -2.0 L-seryl-tRNA(Sec) kinase compare
MMJJ_RS01785 -1.9 -1.0 50S ribosomal protein L14e compare
MMJJ_RS08615 -1.8 -4.0 oligosaccharide repeat unit polymerase family protein compare
MMJJ_RS09130 -1.8 -1.0 NFYB/HAP3 family transcription factor subunit compare
MMJJ_RS01935 -1.8 -1.6 O-phosphoseryl-tRNA(Sec) selenium transferase compare
MMJJ_RS04155 -1.8 -2.7 hypothetical protein compare
MMJJ_RS07015 -1.7 -1.2 PFL family protein compare
MMJJ_RS07960 -1.7 -1.6 quinolinate synthase NadA compare
MMJJ_RS08625 -1.7 -3.7 magnesium/cobalt transporter CorA compare
MMJJ_RS04790 -1.7 -1.7 biotin--[acetyl-CoA-carboxylase] ligase compare
MMJJ_RS06180 -1.7 -1.3 tryptophan--tRNA ligase compare
MMJJ_RS01830 -1.6 -1.7 tRNA(Ile)(2)-agmatinylcytidine synthase compare
MMJJ_RS08715 -1.6 -4.2 NAD-dependent epimerase/dehydratase family protein compare
MMJJ_RS07280 -1.6 -3.9 phosphomannomutase/phosphoglucomutase compare
MMJJ_RS01350 -1.6 -2.7 sodium:proton antiporter compare
MMJJ_RS08190 -1.6 -2.9 hypothetical protein compare
MMJJ_RS00580 -1.6 -0.8 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG compare
MMJJ_RS03055 -1.6 -0.9 hypothetical protein compare
MMJJ_RS08840 -1.6 -1.8 calcium/sodium antiporter compare
MMJJ_RS04520 -1.6 -1.9 coenzyme F430 synthase compare
MMJJ_RS08095 -1.5 -1.5 cobyric acid synthase CobQ compare
MMJJ_RS06225 -1.5 -0.9 adenosylmethionine decarboxylase compare
MMJJ_RS05935 -1.5 -0.9 Era-like GTP-binding protein compare
MMJJ_RS07715 -1.5 -1.8 UbiD family decarboxylase compare
MMJJ_RS00355 -1.5 -1.4 ribonuclease P protein component 4 compare
MMJJ_RS05820 -1.5 -2.6 DUF2304 domain-containing protein compare
MMJJ_RS08785 -1.4 -4.2 D-sedoheptulose 7-phosphate isomerase compare
MMJJ_RS08765 -1.4 -6.9 glycosyltransferase family 9 protein compare
MMJJ_RS01070 -1.4 -1.5 PadR family transcriptional regulator compare
MMJJ_RS04475 -1.4 -1.7 3,4-dihydroxy-2-butanone-4-phosphate synthase compare
MMJJ_RS05595 -1.4 -1.3 hypothetical protein compare
MMJJ_RS01345 -1.4 -2.5 (5-formylfuran-3-yl)methyl phosphate synthase compare
MMJJ_RS05610 -1.4 -1.7 CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMJJ_RS01875 -1.4 -2.2 global nitrogen regulator NrpR compare
MMJJ_RS08080 -1.4 -3.0 TIGR00300 family protein compare
MMJJ_RS00180 -1.4 -3.3 DNA topoisomerase I compare
MMJJ_RS00425 -1.4 -1.6 hypothetical protein compare
MMJJ_RS06220 -1.3 -1.6 polyamine aminopropyltransferase compare
MMJJ_RS04150 -1.3 -1.0 DUF5379 domain-containing protein compare
MMJJ_RS05620 -1.3 -1.7 CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein compare
MMJJ_RS07030 -1.3 -7.1 hypothetical protein compare
MMJJ_RS08750 -1.2 -6.6 glycosyltransferase compare
MMJJ_RS03150 -1.2 -2.2 2-phospho-L-lactate transferase compare
MMJJ_RS00415 -1.2 -2.7 DedA family protein compare
MMJJ_RS08710 -1.2 -2.8 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMJJ_RS08730 -1.2 -6.2 glycosyltransferase family 4 protein compare
MMJJ_RS06240 -1.2 -1.1 dihydropteroate synthase-like protein compare
MMJJ_RS06565 -1.2 -2.6 segregation/condensation protein A compare
MMJJ_RS03095 -1.2 -0.8 bifunctional N(6)-L-threonylcarbamoyladenine synthase/serine/threonine protein kinase compare
MMJJ_RS04620 -1.2 -1.8 homocitrate synthase family protein compare
MMJJ_RS04575 -1.2 -3.6 DUF116 domain-containing protein compare
MMJJ_RS07275 -1.2 -1.1 formate--phosphoribosylaminoimidazolecarboxamide ligase compare
MMJJ_RS05755 -1.1 -6.4 flagellar protein G compare
MMJJ_RS05225 -1.1 -0.6 Gar1/Naf1 family protein compare
MMJJ_RS01810 -1.1 -0.6 methyl coenzyme M reductase system, component A2 compare
MMJJ_RS08720 -1.1 -5.1 UDP-glucose/GDP-mannose dehydrogenase family protein compare
MMJJ_RS08775 -1.1 -5.3 PfkB family carbohydrate kinase compare
MMJJ_RS01475 -1.1 -0.7 signal recognition particle-docking protein FtsY compare
MMJJ_RS07585 -1.1 -3.2 DHH family phosphoesterase compare
MMJJ_RS00600 -1.1 -0.9 hydroxymethylbilane synthase compare
MMJJ_RS03895 -1.1 -0.7 hydrogenase expression/formation protein HypE compare
MMJJ_RS08535 -1.1 -0.8 NOL1/NOP2/sun family putative RNA methylase compare
MMJJ_RS06210 -1.0 -3.3 hypothetical protein compare
MMJJ_RS00195 -1.0 -1.1 precorrin-3B C(17)-methyltransferase compare
MMJJ_RS07265 -1.0 -2.9 tRNA (adenine-N1)-methyltransferase compare
MMJJ_RS07005 -1.0 -3.1 transcription factor S compare
MMJJ_RS03995 -1.0 -1.5 PHP domain-containing protein compare
MMJJ_RS04980 -1.0 -1.5 bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase compare
MMJJ_RS00480 -1.0 -4.7 flippase compare
MMJJ_RS06695 -1.0 -0.7 amidohydrolase compare
MMJJ_RS06040 -1.0 -0.8 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS03490 -1.0 -0.5 ribonuclease VapC compare
MMJJ_RS03155 -1.0 -2.7 hypothetical protein compare
MMJJ_RS03070 -1.0 -1.5 MetS family NSS transporter small subunit compare
MMJJ_RS08760 -1.0 -4.7 glycosyltransferase family 9 protein compare
MMJJ_RS07370 -0.9 -1.3 tRNA 4-thiouridine(8) synthase ThiI compare
MMJJ_RS02035 -0.9 -2.3 4-hydroxy-tetrahydrodipicolinate synthase compare
MMJJ_RS07725 -0.9 -1.3 DNA primase DnaG compare
MMJJ_RS04650 -0.9 -1.5 nitrogenase iron protein compare
MMJJ_RS00215 -0.9 -0.6 CCA tRNA nucleotidyltransferase compare
MMJJ_RS06860 -0.9 -0.9 hypothetical protein compare
MMJJ_RS08055 -0.9 -1.8 methanogenesis marker 14 protein compare
MMJJ_RS01755 -0.9 -0.7 ferrous iron transport protein B compare
MMJJ_RS04360 -0.9 -3.1 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS08725 -0.9 -3.5 flippase compare
MMJJ_RS07680 -0.9 -3.0 glucose-6-phosphate isomerase compare
MMJJ_RS08780 -0.9 -2.1 D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase compare
MMJJ_RS06940 -0.9 -3.7 metalloregulator ArsR/SmtB family transcription factor compare
MMJJ_RS03310 -0.8 -0.9 hypothetical protein compare
MMJJ_RS04485 -0.8 -1.9 riboflavin synthase compare
MMJJ_RS07155 -0.8 -2.3 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMJJ_RS00420 -0.8 -2.4 CBS domain-containing protein compare
MMJJ_RS03775 -0.8 -1.4 50S ribosomal protein L15e compare
MMJJ_RS07245 -0.8 -1.0 amidohydrolase family protein compare
MMJJ_RS00550 -0.8 -2.5 AIR synthase-related protein compare
MMJJ_RS03170 -0.8 -1.3 DUF5612 domain-containing protein compare
MMJJ_RS03190 -0.8 -0.5 phosphopyruvate hydratase compare
MMJJ_RS00275 -0.8 -0.5 coenzyme F420-0:L-glutamate ligase compare
MMJJ_RS04800 -0.8 -1.1 2-phospho-L-lactate guanylyltransferase compare
MMJJ_RS02140 -0.8 -2.9 preflagellin peptidase FlaK compare
MMJJ_RS08810 -0.8 -0.4 DUF4040 domain-containing protein compare
MMJJ_RS01355 -0.8 -0.7 UDP-N-acetyl-D-mannosamine dehydrogenase compare
MMJJ_RS03810 -0.8 -0.9 AIR synthase-related protein compare
MMJJ_RS03605 -0.7 -1.7 TIGR00297 family protein compare
MMJJ_RS05760 -0.7 -4.4 flagellar protein F compare
MMJJ_RS05785 -0.7 -3.1 flagellin compare
MMJJ_RS07750 -0.7 -1.2 class III signal peptide-containing protein compare
MMJJ_RS01825 -0.7 -2.5 DNA repair and recombination protein RadB compare
MMJJ_RS07875 -0.7 -0.5 FAD-dependent oxidoreductase compare
MMJJ_RS04975 -0.7 -0.4 glycosyltransferase family 4 protein compare
MMJJ_RS08770 -0.7 -2.1 HAD family hydrolase compare
MMJJ_RS05740 -0.7 -4.3 archaellar assembly protein FlaJ compare
MMJJ_RS07490 -0.7 -1.1 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMJJ_RS03195 -0.7 -0.9 hypothetical protein compare
MMJJ_RS06480 -0.7 -3.0 hypothetical protein compare
MMJJ_RS05745 -0.7 -4.1 type II/IV secretion system ATPase subunit compare
MMJJ_RS01010 -0.7 -5.7 right-handed parallel beta-helix repeat-containing protein compare
MMJJ_RS06750 -0.7 -0.4 homoaconitase large subunit compare
MMJJ_RS05750 -0.7 -4.0 flagellar accessory protein FlaH compare
MMJJ_RS06865 -0.7 -1.0 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS03250 -0.7 -0.8 DUF2116 family Zn-ribbon domain-containing protein compare
MMJJ_RS05295 -0.7 -1.9 cobyrinic acid a,c-diamide synthase compare
MMJJ_RS04700 -0.7 -1.2 deoxyhypusine synthase compare
MMJJ_RS00125 -0.6 -0.5 KEOPS complex subunit Cgi121 compare
MMJJ_RS08755 -0.6 -3.8 ADP-glyceromanno-heptose 6-epimerase compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in attachment assay; attached sample experiments