Experiment set6S489 for Enterobacter sp. TBS_079

Compare to:

1X LB plate, Mixed culture; Streptomyces tendae SAI_182 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct

200 most important genes:

  gene name fitness t score description  
MPMX20_02591 -4.7 -3.3 DNA-binding protein H-NS compare
MPMX20_03020 -4.7 -11.3 hypothetical protein compare
MPMX20_03019 -4.4 -13.6 hypothetical protein compare
MPMX20_04489 -4.3 -19.6 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_03017 -4.2 -15.7 hypothetical protein compare
MPMX20_00105 -4.2 -20.6 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_03018 -4.0 -2.8 hypothetical protein compare
MPMX20_00109 -4.0 -22.7 hypothetical protein compare
MPMX20_00110 -4.0 -19.5 hypothetical protein compare
MPMX20_00108 -3.8 -26.5 hypothetical protein compare
MPMX20_03986 -3.8 -4.4 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_01334 -3.8 -9.7 Phosphoglucomutase compare
MPMX20_03015 -3.5 -23.4 Phosphoglucosamine mutase compare
MPMX20_03016 -3.5 -22.9 Mannose-1-phosphate guanylyltransferase RfbM compare
MPMX20_01357 -3.5 -4.7 Succinate--CoA ligase [ADP-forming] subunit alpha compare
MPMX20_01354 -3.4 -2.3 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_03021 -3.3 -8.1 hypothetical protein compare
MPMX20_04530 -3.3 -12.7 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_04768 -3.3 -2.3 hypothetical protein compare
MPMX20_02696 -3.2 -7.2 Murein tetrapeptide carboxypeptidase compare
MPMX20_01368 -3.2 -2.2 hypothetical protein compare
MPMX20_01919 -3.1 -2.0 putative protein YdiE compare
MPMX20_03756 -3.1 -3.6 FAD assembly factor SdhE compare
MPMX20_04730 -3.0 -7.9 hypothetical protein compare
MPMX20_03490 -2.9 -4.8 SsrA-binding protein compare
MPMX20_04375 -2.9 -9.3 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MPMX20_01950 -2.9 -3.4 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_01352 -2.8 -5.8 Succinate dehydrogenase flavoprotein subunit compare
MPMX20_01101 -2.8 -2.5 Peptidyl-prolyl cis-trans isomerase B compare
MPMX20_03443 -2.8 -7.1 Anti-sigma-E factor RseA compare
MPMX20_04442 -2.8 -2.7 Sec-independent protein translocase protein TatC compare
MPMX20_02997 -2.8 -4.2 Exodeoxyribonuclease I compare
MPMX20_02657 -2.8 -12.1 hypothetical protein compare
MPMX20_03214 -2.7 -3.7 NADH-quinone oxidoreductase subunit F compare
MPMX20_03396 -2.7 -4.8 Nucleoside diphosphate kinase compare
MPMX20_00747 -2.7 -4.1 Ribosomal RNA small subunit methyltransferase A compare
MPMX20_02672 -2.7 -4.1 hypothetical protein compare
MPMX20_03208 -2.7 -3.6 NADH-quinone oxidoreductase subunit L compare
MPMX20_03390 -2.6 -6.3 Outer membrane protein assembly factor BamB compare
MPMX20_01349 -2.6 -3.6 Citrate synthase compare
MPMX20_02020 -2.6 -12.2 Mannose-6-phosphate isomerase compare
MPMX20_03267 -2.6 -3.0 Phosphohistidine phosphatase SixA compare
MPMX20_00106 -2.6 -1.8 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_03385 -2.6 -4.3 hypothetical protein compare
MPMX20_01607 -2.6 -4.2 Outer membrane protein A compare
MPMX20_04483 -2.5 -1.7 Lipid III flippase compare
MPMX20_03435 -2.5 -2.0 Pyridoxine 5'-phosphate synthase compare
MPMX20_04626 -2.5 -1.7 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_01355 -2.5 -0.9 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_01353 -2.4 -5.1 Succinate dehydrogenase iron-sulfur subunit compare
MPMX20_04532 -2.4 -1.6 Met repressor compare
MPMX20_01351 -2.4 -3.2 Succinate dehydrogenase hydrophobic membrane anchor subunit compare
MPMX20_03213 -2.3 -5.4 NADH-quinone oxidoreductase subunit G compare
MPMX20_01021 -2.3 -3.1 Cytochrome bo(3) ubiquinol oxidase subunit 3 compare
MPMX20_04140 -2.3 -4.4 Malate dehydrogenase compare
MPMX20_01367 -2.3 -2.2 Tol-Pal system protein TolR compare
MPMX20_03010 -2.3 -1.6 UDP-glucose 4-epimerase compare
MPMX20_03206 -2.2 -4.8 NADH-quinone oxidoreductase subunit N compare
MPMX20_01356 -2.2 -6.5 Succinate--CoA ligase [ADP-forming] subunit beta compare
MPMX20_01350 -2.2 -3.1 Succinate dehydrogenase cytochrome b556 subunit compare
MPMX20_01370 -2.2 -2.1 Peptidoglycan-associated lipoprotein compare
MPMX20_04377 -2.2 -10.5 putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD compare
MPMX20_01019 -2.2 -4.8 Protoheme IX farnesyltransferase compare
MPMX20_03932 -2.2 -3.3 hypothetical protein compare
MPMX20_00102 -2.2 -1.5 hypothetical protein compare
MPMX20_03207 -2.2 -3.8 NADH-quinone oxidoreductase subunit M compare
MPMX20_03216 -2.2 -5.7 NADH-quinone oxidoreductase subunit C/D compare
MPMX20_04374 -2.1 -4.0 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
MPMX20_00745 -2.1 -2.0 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical compare
MPMX20_00456 -2.1 -7.0 Modulator of FtsH protease HflC compare
MPMX20_03022 -2.1 -1.4 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_03882 -2.1 -6.2 Outer membrane protein TolC compare
MPMX20_04352 -2.1 -4.3 hypothetical protein compare
MPMX20_04440 -2.0 -1.4 Transcription antitermination protein RfaH compare
MPMX20_02766 -2.0 -2.0 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_02769 -2.0 -1.4 putative transcriptional regulatory protein YebC compare
MPMX20_03153 -2.0 -1.7 hypothetical protein compare
MPMX20_04133 -2.0 -6.4 Stringent starvation protein A compare
MPMX20_04279 -2.0 -3.5 Shikimate kinase 1 compare
MPMX20_02768 -2.0 -1.9 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_02767 -2.0 -3.0 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_03210 -2.0 -3.5 NADH-quinone oxidoreductase subunit J compare
MPMX20_01369 -1.9 -4.1 Tol-Pal system protein TolB compare
MPMX20_00570 -1.9 -11.0 putative BsuMI modification methylase subunit YdiO compare
MPMX20_02882 -1.9 -9.4 hypothetical protein compare
MPMX20_04731 -1.9 -5.6 Plasmid-derived single-stranded DNA-binding protein compare
MPMX20_00419 -1.9 -5.1 Aspartate ammonia-lyase compare
MPMX20_01022 -1.9 -7.4 Cytochrome bo(3) ubiquinol oxidase subunit 1 compare
MPMX20_03212 -1.9 -3.1 NADH-quinone oxidoreductase subunit H compare
MPMX20_01323 -1.9 -7.3 N-acetylglucosamine-6-phosphate deacetylase compare
MPMX20_00775 -1.9 -3.3 Ribosomal RNA small subunit methyltransferase H compare
MPMX20_03217 -1.9 -2.5 NADH-quinone oxidoreductase subunit B compare
MPMX20_01867 -1.9 -6.3 N-succinylglutamate 5-semialdehyde dehydrogenase compare
MPMX20_00241 -1.9 -7.3 Glucose-6-phosphate isomerase compare
MPMX20_00749 -1.8 -3.5 Chaperone SurA compare
MPMX20_02899 -1.8 -6.8 hypothetical protein compare
MPMX20_03753 -1.8 -3.2 Tyrosine recombinase XerD compare
MPMX20_00453 -1.8 -2.0 RNA-binding protein Hfq compare
MPMX20_04601 -1.8 -1.2 DNA polymerase I compare
MPMX20_00258 -1.8 -4.3 Diacylglycerol kinase compare
MPMX20_04444 -1.8 -1.2 Sec-independent protein translocase protein TatA compare
MPMX20_01765 -1.8 -2.9 Ribonuclease E compare
MPMX20_03440 -1.8 -1.7 Elongation factor 4 compare
MPMX20_04141 -1.8 -4.3 Arginine repressor compare
MPMX20_04465 -1.8 -2.9 Tyrosine recombinase XerC compare
MPMX20_01023 -1.8 -9.2 Cytochrome bo(3) ubiquinol oxidase subunit 2 compare
MPMX20_04518 -1.7 -3.7 Soluble pyridine nucleotide transhydrogenase compare
MPMX20_01156 -1.7 -2.6 hypothetical protein compare
MPMX20_01869 -1.7 -5.6 Succinylglutamate desuccinylase compare
MPMX20_04650 -1.7 -2.0 tRNA modification GTPase MnmE compare
MPMX20_01586 -1.7 -6.1 Aspartate aminotransferase compare
MPMX20_02143 -1.7 -3.2 1,2-phenylacetyl-CoA epoxidase, subunit B compare
MPMX20_03386 -1.7 -0.8 putative protein YfgJ compare
MPMX20_00831 -1.7 -3.4 RNA polymerase-binding transcription factor DksA compare
MPMX20_04639 -1.6 -1.1 Phosphate-binding protein PstS compare
MPMX20_02885 -1.6 -2.6 hypothetical protein compare
MPMX20_03405 -1.6 -1.6 Protein IscX compare
MPMX20_03742 -1.6 -3.9 HTH-type transcriptional regulator GalR compare
MPMX20_03154 -1.6 -6.7 Inner membrane protein YejM compare
MPMX20_01552 -1.6 -1.1 hypothetical protein compare
MPMX20_02891 -1.6 -9.4 hypothetical protein compare
MPMX20_03211 -1.6 -3.0 NADH-quinone oxidoreductase subunit I compare
MPMX20_02886 -1.6 -7.3 hypothetical protein compare
MPMX20_00133 -1.6 -3.4 Mannitol operon repressor compare
MPMX20_03047 -1.6 -3.1 dCTP deaminase compare
MPMX20_02477 -1.6 -1.8 Peptide transport system ATP-binding protein SapD compare
MPMX20_03308 -1.5 -3.7 Cysteine synthase A compare
MPMX20_02098 -1.5 -5.4 HTH-type transcriptional repressor RspR compare
MPMX20_00480 -1.5 -2.8 50S ribosomal protein L9 compare
MPMX20_02879 -1.5 -2.9 hypothetical protein compare
MPMX20_03641 -1.5 -4.9 Phosphoadenosine phosphosulfate reductase compare
MPMX20_02147 -1.5 -4.7 2,3-dehydroadipyl-CoA hydratase compare
MPMX20_02476 -1.5 -1.0 Putrescine export system permease protein SapC compare
MPMX20_03447 -1.5 -4.8 ATP-dependent RNA helicase SrmB compare
MPMX20_02737 -1.5 -5.4 Tail-specific protease compare
MPMX20_01020 -1.5 -1.0 Cytochrome bo(3) ubiquinol oxidase subunit 4 compare
MPMX20_03408 -1.4 -1.7 Co-chaperone protein HscB compare
MPMX20_03218 -1.4 -2.5 NAD(P)H-quinone oxidoreductase subunit 3 compare
MPMX20_03591 -1.4 -4.3 Glucitol operon repressor compare
MPMX20_04301 -1.4 -1.9 Fe/S biogenesis protein NfuA compare
MPMX20_00793 -1.4 -2.1 DNA gyrase inhibitor YacG compare
MPMX20_03571 -1.4 -1.4 tRNA-Arg compare
MPMX20_03309 -1.4 -1.0 Phosphocarrier protein HPr compare
MPMX20_04276 -1.4 -2.8 DNA adenine methylase compare
MPMX20_04003 -1.4 -2.9 Putative L-lactate dehydrogenase operon regulatory protein compare
MPMX20_00693 -1.4 -4.5 Phosphoserine phosphatase compare
MPMX20_00728 -1.4 -1.0 FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase compare
MPMX20_00773 -1.4 -4.5 Catabolite repressor/activator compare
MPMX20_01017 -1.4 -3.2 hypothetical protein compare
MPMX20_03090 -1.4 -0.9 Methionine--tRNA ligase compare
MPMX20_04194 -1.4 -1.2 Peptide deformylase compare
MPMX20_02701 -1.4 -0.9 Fatty acid metabolism regulator protein compare
MPMX20_03254 -1.4 -2.6 USG-1 protein compare
MPMX20_01333 -1.4 -3.5 Negative modulator of initiation of replication compare
MPMX20_02884 -1.4 -6.5 hypothetical protein compare
MPMX20_01135 -1.4 -4.8 HTH-type transcriptional regulator BetI compare
MPMX20_00980 -1.4 -5.1 hypothetical protein compare
MPMX20_00908 -1.3 -6.0 Glutathione hydrolase-like YwrD proenzyme compare
MPMX20_00111 -1.3 -7.0 hypothetical protein compare
MPMX20_00107 -1.3 -4.1 Lipopolysaccharide core heptosyltransferase RfaQ compare
MPMX20_04467 -1.3 -4.4 Diaminopimelate epimerase compare
MPMX20_03629 -1.3 -2.6 Protein-L-isoaspartate O-methyltransferase compare
MPMX20_03851 -1.3 -5.6 Biopolymer transport protein ExbB compare
MPMX20_02635 -1.3 -1.2 Release factor glutamine methyltransferase compare
MPMX20_03285 -1.3 -0.6 hypothetical protein compare
MPMX20_02892 -1.3 -5.3 hypothetical protein compare
MPMX20_04463 -1.3 -3.6 DNA helicase II compare
MPMX20_04104 -1.3 -2.2 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC compare
MPMX20_01064 -1.3 -7.6 Multidrug efflux pump subunit AcrB compare
MPMX20_00537 -1.3 -4.9 Trehalose-6-phosphate hydrolase compare
MPMX20_01542 -1.2 -2.4 Cold shock-like protein CspD compare
MPMX20_02011 -1.2 -5.3 Ion-translocating oxidoreductase complex subunit A compare
MPMX20_02141 -1.2 -4.8 Bifunctional protein PaaZ compare
MPMX20_04275 -1.2 -1.4 Ribulose-phosphate 3-epimerase compare
MPMX20_01065 -1.2 -3.5 Multidrug efflux pump subunit AcrA compare
MPMX20_02699 -1.2 -5.6 D-amino acid dehydrogenase compare
MPMX20_00452 -1.2 -5.7 tRNA dimethylallyltransferase compare
MPMX20_03487 -1.2 -3.4 Outer membrane protein assembly factor BamE compare
MPMX20_04485 -1.2 -3.7 dTDP-fucosamine acetyltransferase compare
MPMX20_00812 -1.2 -2.5 Aconitate hydratase B compare
MPMX20_02707 -1.2 -1.7 Septum site-determining protein MinC compare
MPMX20_02472 -1.2 -3.2 Phage shock protein A compare
MPMX20_02148 -1.2 -5.7 1,2-epoxyphenylacetyl-CoA isomerase compare
MPMX20_01972 -1.2 -0.7 tRNA-Val compare
MPMX20_02546 -1.2 -1.7 hypothetical protein compare
MPMX20_03344 -1.2 -5.4 Beta-barrel assembly-enhancing protease compare
MPMX20_00514 -1.2 -2.1 Fructose-1,6-bisphosphatase class 1 compare
MPMX20_03174 -1.2 -4.2 FAD:protein FMN transferase compare
MPMX20_04137 -1.2 -2.6 Inner membrane protein YhcB compare
MPMX20_01813 -1.2 -8.0 hypothetical protein compare
MPMX20_00455 -1.1 -5.2 Modulator of FtsH protease HflK compare
MPMX20_04687 -1.1 -4.2 hypothetical protein compare
MPMX20_02957 -1.1 -6.9 DNA-cytosine methyltransferase compare
MPMX20_02919 -1.1 -3.9 hypothetical protein compare
MPMX20_02901 -1.1 -7.4 hypothetical protein compare
MPMX20_00087 -1.1 -1.4 DNA-directed RNA polymerase subunit omega compare
MPMX20_03409 -1.1 -1.1 Iron-binding protein IscA compare
MPMX20_04170 -1.1 -2.0 DNA-binding protein Fis compare
MPMX20_04628 -1.1 -1.5 ATP synthase protein I compare
MPMX20_01750 -1.1 -4.1 Negative regulator of flagellin synthesis compare


Specific Phenotypes

None in this experiment

For Enterobacter sp. TBS_079 in mixed community experiments

For mixed community Mixed culture; Streptomyces tendae SAI_182 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct across organisms