Experiment set6IT095 for Pseudomonas fluorescens FW300-N2E3

Compare to:

L-Glutamine nitrogen source

200 most important genes:

  gene name fitness t score description  
AO353_20625 -4.5 -3.1 3-isopropylmalate dehydratase compare
AO353_20695 -4.5 -6.8 O-succinylhomoserine sulfhydrylase compare
AO353_13165 -4.4 -4.3 ATP phosphoribosyltransferase regulatory subunit compare
AO353_07220 -4.3 -6.6 anthranilate synthase compare
AO353_12090 -4.3 -3.0 imidazole glycerol phosphate synthase subunit HisF compare
AO353_22800 -4.2 -2.9 sulfite reductase compare
AO353_05115 -4.2 -9.7 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
AO353_08185 -4.1 -9.3 methionine biosynthesis protein MetW compare
AO353_02070 -4.1 -7.4 prephenate dehydratase compare
AO353_20540 -4.0 -8.6 aromatic amino acid aminotransferase compare
AO353_14505 -4.0 -10.5 ketol-acid reductoisomerase compare
AO353_12085 -3.9 -7.0 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
AO353_08180 -3.9 -12.9 homoserine O-acetyltransferase compare
AO353_20665 -3.9 -10.2 N-(5'-phosphoribosyl)anthranilate isomerase compare
AO353_07230 -3.8 -15.9 anthranilate synthase compare
AO353_13070 -3.7 -6.7 phosphoserine phosphatase compare
AO353_20620 -3.7 -8.2 isopropylmalate isomerase compare
AO353_12075 -3.7 -7.9 imidazole glycerol phosphate synthase subunit HisH compare
AO353_00495 -3.7 -3.5 DNA topoisomerase I compare
AO353_07215 -3.6 -8.1 anthranilate phosphoribosyltransferase compare
AO353_20635 -3.6 -13.2 3-isopropylmalate dehydrogenase compare
AO353_08475 -3.6 -9.9 phosphoserine phosphatase compare
AO353_15925 -3.5 -14.6 2-isopropylmalate synthase compare
AO353_12365 -3.5 -4.7 phosphoribosyl-AMP cyclohydrolase compare
AO353_12070 -3.4 -9.4 imidazoleglycerol-phosphate dehydratase compare
AO353_10710 -3.4 -4.7 tryptophan synthase subunit beta compare
AO353_08345 -3.4 -9.5 dihydroxy-acid dehydratase compare
AO353_01375 -3.4 -7.1 phosphate acyltransferase compare
AO353_07515 -3.3 -3.2 transporter compare
AO353_02075 -3.3 -11.3 3-phosphoserine/phosphohydroxythreonine aminotransferase compare
AO353_10670 -3.2 -8.4 shikimate dehydrogenase compare
AO353_09000 -3.2 -5.7 argininosuccinate lyase compare
AO353_00310 -3.1 -10.1 transaldolase compare
AO353_09240 -3.1 -3.0 acetylglutamate kinase compare
AO353_08685 -3.1 -9.6 N-acetylglutamate synthase compare
AO353_05110 -3.1 -11.8 histidinol dehydrogenase compare
AO353_07155 -3.1 -6.2 N-acetyl-gamma-glutamyl-phosphate reductase compare
AO353_19060 -3.0 -6.0 CysB family transcriptional regulator compare
AO353_13605 -3.0 -11.9 oxidoreductase compare
AO353_14495 -3.0 -11.5 acetolactate synthase 3 catalytic subunit compare
AO353_12360 -3.0 -10.1 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
AO353_04155 -2.9 -12.4 ornithine carbamoyltransferase compare
AO353_09285 -2.9 -11.8 reactive intermediate/imine deaminase compare
AO353_10455 -2.9 -2.0 tRNA modification GTPase MnmE compare
AO353_13100 -2.8 -2.7 GTPase RsgA compare
AO353_12500 -2.8 -1.9 shikimate kinase compare
AO353_14500 -2.7 -7.8 acetolactate synthase 3 regulatory subunit compare
AO353_14400 -2.7 -3.2 Fis family transcriptional regulator compare
AO353_05080 -2.7 -12.1 sulfate adenylyltransferase compare
AO353_13610 -2.7 -5.4 precorrin isomerase compare
AO353_04105 -2.7 -9.7 argininosuccinate synthase compare
AO353_07210 -2.7 -5.6 indole-3-glycerol-phosphate synthase compare
AO353_00825 -2.7 -5.1 porin compare
AO353_03360 -2.7 -9.6 glucose-6-phosphate dehydrogenase compare
AO353_16210 -2.7 -13.5 XRE family transcriptional regulator compare
AO353_08165 -2.6 -3.1 pyrroline-5-carboxylate reductase compare
AO353_05075 -2.6 -11.8 adenylylsulfate kinase compare
AO353_05105 -2.6 -10.4 histidinol-phosphate aminotransferase compare
AO353_06495 -2.6 -6.3 gamma-glutamyl phosphate reductase compare
AO353_07525 -2.5 -13.6 biotin synthase compare
AO353_02975 -2.5 -3.9 aspartate kinase compare
AO353_08780 -2.4 -7.7 5-formyltetrahydrofolate cyclo-ligase compare
AO353_08015 -2.4 -8.1 5,10-methylenetetrahydrofolate reductase compare
AO353_06155 -2.4 -9.2 copper-transporting ATPase compare
AO353_12460 -2.3 -9.0 malate dehydrogenase compare
AO353_12115 -2.3 -3.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
AO353_13620 -2.3 -10.8 precorrin-3B C17-methyltransferase compare
AO353_10025 -2.3 -14.0 pyruvate carboxylase subunit B compare
AO353_02250 -2.3 -3.7 chorismate synthase compare
AO353_00660 -2.2 -3.6 transcriptional regulator compare
AO353_08045 -2.2 -13.4 adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
AO353_02605 -2.2 -6.3 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
AO353_19360 -2.2 -3.3 peroxiredoxin compare
AO353_10030 -2.2 -10.8 pyruvate carboxylase subunit A compare
AO353_03415 -2.1 -6.6 glucokinase compare
AO353_20565 -2.1 -2.1 tRNA-Ala compare
AO353_15250 -2.1 -3.9 cytochrome B compare
AO353_21660 -2.1 -11.6 cobalamin biosynthesis protein CobN compare
AO353_21665 -2.1 -5.6 magnesium chelatase compare
AO353_13600 -2.0 -4.4 precorrin-6Y C5,15-methyltransferase compare
AO353_07355 -2.0 -6.2 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase compare
AO353_10035 -2.0 -8.7 LysR family transcriptional regulator compare
AO353_09890 -2.0 -5.8 phosphate ABC transporter ATP-binding protein compare
AO353_02615 -2.0 -7.2 cobyric acid synthase compare
AO353_02625 -2.0 -9.6 cobalamin biosynthesis protein CobD compare
AO353_08510 -2.0 -4.9 3-phosphoglycerate dehydrogenase compare
AO353_14115 -1.9 -6.6 gamma-glutamyl kinase compare
AO353_02720 -1.9 -6.3 cysteine synthase compare
AO353_03795 -1.9 -4.5 fumarate hydratase compare
AO353_13590 -1.9 -5.8 cobalt-precorrin-6X reductase compare
AO353_09030 -1.9 -2.3 iron donor protein CyaY compare
AO353_00650 -1.9 -3.4 cytochrome biogenesis protein compare
AO353_10780 -1.9 -2.5 DNA-binding protein compare
AO353_13615 -1.8 -11.4 precorrin-2 C20-methyltransferase compare
AO353_12105 -1.8 -6.3 peptidase S41 compare
AO353_14775 -1.8 -6.4 hypothetical protein compare
AO353_02595 -1.8 -2.7 cobalamin synthase compare
AO353_07505 -1.7 -8.0 dethiobiotin synthetase compare
AO353_18540 -1.7 -2.9 pseudouridine synthase compare
AO353_07520 -1.7 -8.8 8-amino-7-oxononanoate synthase compare
AO353_24260 -1.6 -2.6 hypothetical protein compare
AO353_07510 -1.6 -7.5 malonyl-[acyl-carrier protein] O-methyltransferase BioC compare
AO353_00750 -1.6 -4.1 GntR family transcriptional regulator compare
AO353_14990 -1.6 -2.2 hypothetical protein compare
AO353_10495 -1.6 -3.8 serine hydroxymethyltransferase compare
AO353_02685 -1.6 -3.6 phosphoribosylglycinamide formyltransferase compare
AO353_07315 -1.6 -2.8 rRNA methyltransferase compare
AO353_06045 -1.6 -6.6 exodeoxyribonuclease V subunit beta compare
AO353_05690 -1.6 -3.4 SsrA-binding protein compare
AO353_21625 -1.6 -2.6 Fe/S biogenesis protein NfuA compare
AO353_10705 -1.6 -4.1 tryptophan synthase subunit alpha compare
AO353_02635 -1.6 -6.6 cobyrinic acid a,c-diamide synthase compare
AO353_12665 -1.6 -2.8 glycosyl transferase compare
AO353_13225 -1.5 -2.7 50S ribosomal protein L9 compare
AO353_15725 -1.5 -4.4 hypothetical protein compare
AO353_12930 -1.5 -3.6 GlcNAc-PI de-N-acetylase compare
AO353_02610 -1.5 -5.0 adenosylcobinamide kinase compare
AO353_08880 -1.5 -2.4 exopolyphosphatase compare
AO353_02620 -1.5 -4.4 threonine-phosphate decarboxylase compare
AO353_14740 -1.5 -3.5 GTP-binding protein compare
AO353_00635 -1.5 -3.1 hypothetical protein compare
AO353_27650 -1.5 -4.4 cell division protein FtsK compare
AO353_11730 -1.4 -8.3 glutamate--cysteine ligase compare
AO353_06050 -1.4 -6.0 exodeoxyribonuclease V subunit gamma compare
AO353_06725 -1.4 -1.9 hypothetical protein compare
AO353_03580 -1.4 -3.3 ATP-dependent DNA helicase RuvB compare
AO353_03710 -1.4 -3.0 formyltetrahydrofolate deformylase compare
AO353_10500 -1.4 -3.3 acetylornithine aminotransferase compare
AO353_13640 -1.4 -3.9 histidine kinase compare
AO353_22920 -1.4 -4.5 GntR family transcriptional regulator compare
AO353_20095 -1.4 -4.4 histidine kinase compare
AO353_20175 -1.4 -3.1 ATP-dependent Clp protease proteolytic subunit compare
AO353_21655 -1.4 -3.0 cobalamin biosynthesis protein CobW compare
AO353_21615 -1.3 -7.9 methionine synthase compare
AO353_05625 -1.3 -1.5 transcription elongation factor GreA compare
AO353_02640 -1.3 -2.4 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
AO353_16940 -1.3 -4.6 deoxycytidine triphosphate deaminase compare
AO353_05150 -1.3 -4.4 ABC transporter ATP-binding protein compare
AO353_03615 -1.3 -2.8 cold-shock protein compare
AO353_16805 -1.3 -5.2 recombinase RecA compare
AO353_04325 -1.3 -1.9 hypothetical protein compare
AO353_26945 -1.3 -2.6 transcriptional regulator compare
AO353_24595 -1.3 -2.1 hypothetical protein compare
AO353_03420 -1.3 -4.1 phosphogluconate dehydratase compare
AO353_13160 -1.3 -2.1 membrane protease HflC compare
AO353_01410 -1.3 -2.5 ribonuclease E compare
AO353_20170 -1.2 -4.0 trigger factor compare
AO353_06100 -1.2 -2.3 thymidylate synthase compare
AO353_06040 -1.2 -2.9 exodeoxyribonuclease V subunit alpha compare
AO353_18335 -1.2 -2.8 hypothetical protein compare
AO353_02220 -1.2 -1.8 hypothetical protein compare
AO353_02000 -1.2 -3.3 polysaccharide/polyol phosphate ABC transporter ATP-binding protein compare
AO353_10445 -1.2 -1.9 tRNA uridine 5-carboxymethylaminomethyl modification protein compare
AO353_18890 -1.2 -4.1 cytochrome C compare
AO353_09250 -1.2 -2.9 exodeoxyribonuclease III compare
AO353_10715 -1.2 -5.2 LysR family transcriptional regulator compare
AO353_04185 -1.2 -3.7 DeoR family transcriptional regulator compare
AO353_10520 -1.2 -4.2 GntR family transcriptional regulator compare
AO353_11770 -1.2 -2.0 molecular chaperone Hsp33 compare
AO353_06540 -1.1 -1.6 hypothetical protein compare
AO353_22520 -1.1 -2.2 hypothetical protein compare
AO353_15410 -1.1 -1.6 hypothetical protein compare
AO353_03590 -1.1 -2.8 crossover junction endodeoxyribonuclease RuvC compare
AO353_24275 -1.1 -2.3 transcriptional regulator compare
AO353_13200 -1.1 -7.3 exoribonuclease R compare
AO353_02060 -1.1 -2.8 3-phosphoshikimate 1-carboxyvinyltransferase compare
AO353_21630 -1.1 -2.2 precorrin-4 C11-methyltransferase compare
AO353_07075 -1.1 -3.6 elongation factor Tu compare
AO353_09955 -1.1 -7.9 sodium:alanine symporter compare
AO353_17165 -1.1 -2.2 ATP-dependent helicase compare
AO353_05520 -1.1 -3.7 nicotinate-nucleotide pyrophosphorylase compare
AO353_27435 -1.1 -1.6 hypothetical protein compare
AO353_14595 -1.1 -4.9 carbonate dehydratase compare
AO353_01915 -1.1 -1.0 GlcG protein compare
AO353_00610 -1.1 -1.8 cytochrome C oxidase Cbb3 compare
AO353_14935 -1.1 -2.7 aminopeptidase compare
AO353_00330 -1.1 -5.4 hypothetical protein compare
AO353_02040 -1.1 -2.5 integration host factor subunit beta compare
AO353_10510 -1.0 -1.7 benzoate transporter compare
AO353_04355 -1.0 -1.6 homoserine dehydrogenase compare
AO353_03100 -1.0 -0.9 XRE family transcriptional regulator compare
AO353_16360 -1.0 -4.7 RND transporter compare
AO353_18135 -1.0 -2.0 hypothetical protein compare
AO353_12345 -1.0 -1.6 twin-arginine protein translocation system subunit TatC compare
AO353_18450 -1.0 -3.7 hypothetical protein compare
AO353_00600 -1.0 -4.0 cytochrome C oxidase Cbb3 compare
AO353_12690 -1.0 -1.0 acyl carrier protein compare
AO353_04520 -1.0 -3.3 elongation factor 4 compare
AO353_25220 -1.0 -2.1 hypothetical protein compare
AO353_12515 -1.0 -8.0 glutamate synthase compare
AO353_22925 -1.0 -5.8 (Fe-S)-binding protein compare
AO353_13155 -1.0 -2.6 hypothetical protein compare
AO353_15480 -1.0 -1.9 hypothetical protein compare
AO353_09040 -1.0 -1.4 diaminopimelate epimerase compare
AO353_13140 -1.0 -4.0 tRNA dimethylallyltransferase compare
AO353_08115 -1.0 -4.1 energy transducer TonB compare
AO353_23955 -1.0 -2.7 RND transporter compare
AO353_24915 -1.0 -1.8 hypothetical protein compare
AO353_23405 -1.0 -1.4 hypothetical protein compare
AO353_14220 -1.0 -1.0 ribosomal large subunit pseudouridine synthase D compare


Specific Phenotypes

For 1 genes in this experiment

For nitrogen source L-Glutamine in Pseudomonas fluorescens FW300-N2E3

For nitrogen source L-Glutamine across organisms