Experiment set6IT091 for Methanococcus maripaludis S2

Compare to:

H2 N-free with 10mM L-Glutamine

200 most detrimental genes:

  gene name fitness t score description  
MMP_RS06720 +1.0 6.2 response regulator transcription factor compare
MMP_RS06715 +1.0 7.7 cache domain-containing protein compare
MMP_RS02805 +0.9 1.9 HEPN domain-containing protein compare
MMP_RS02290 +0.9 5.3 MBL fold metallo-hydrolase compare
MMP_RS07960 +0.8 5.4 sugar phosphate isomerase/epimerase compare
MMP_RS00655 +0.8 3.3 hypothetical protein compare
MMP_RS00185 +0.7 5.3 potassium channel protein compare
MMP_RS00345 +0.7 4.4 DUF2666 domain-containing protein compare
MMP_RS06575 +0.7 2.5 fluoride efflux transporter CrcB compare
MMP_RS05695 +0.7 4.0 phospholipase D-like domain-containing protein compare
MMP_RS00395 +0.7 1.7 MGMT family protein compare
MMP_RS08455 +0.6 3.5 multiprotein bridging factor aMBF1 compare
MMP_RS07890 +0.6 1.4 OB-fold nucleic acid binding domain-containing protein compare
MMP_RS02605 +0.6 1.0 MotA/TolQ/ExbB proton channel family protein compare
MMP_RS08665 +0.6 4.7 hypothetical protein compare
MMP_RS08070 +0.6 2.6 DUF2096 domain-containing protein compare
MMP_RS01675 +0.6 1.5 hypothetical protein compare
MMP_RS08845 +0.6 3.5 archaellum operon transcriptional activator EarA family protein compare
MMP_RS08850 +0.5 4.7 hypothetical protein compare
MMP_RS02595 +0.5 1.2 putative zinc-binding protein compare
MMP_RS08580 +0.5 1.2 flagellin compare
MMP_RS02495 +0.5 2.2 hypothetical protein compare
MMP_RS07680 +0.5 2.7 DUF366 family protein compare
MMP_RS07765 +0.5 3.3 sodium:alanine symporter family protein compare
MMP_RS01525 +0.5 1.5 nucleoside-diphosphate kinase compare
MMP_RS07915 +0.5 3.4 DUF4870 domain-containing protein compare
MMP_RS08310 +0.5 1.6 TMEM165/GDT1 family protein compare
MMP_RS08380 +0.5 3.2 phosphatase PAP2 family protein compare
MMP_RS08280 +0.5 2.2 proteasome assembly chaperone family protein compare
MMP_RS08640 +0.5 2.9 TIM barrel protein compare
MMP_RS02415 +0.5 1.5 site-specific integrase compare
MMP_RS08285 +0.5 2.9 serine/threonine protein kinase compare
MMP_RS01630 +0.5 3.0 N-glycosylase/DNA lyase compare
MMP_RS01115 +0.5 3.3 molybdopterin molybdotransferase MoeA compare
MMP_RS01250 +0.5 1.3 tRNA (guanine(26)-N(2))-dimethyltransferase compare
MMP_RS04610 +0.5 2.4 Dabb family protein compare
MMP_RS08275 +0.5 3.0 hypothetical protein compare
MMP_RS08265 +0.4 2.3 rubrerythrin compare
MMP_RS00385 +0.4 2.6 P-II family nitrogen regulator compare
MMP_RS08750 +0.4 1.4 hypothetical protein compare
MMP_RS08235 +0.4 2.6 hypothetical protein compare
MMP_RS08075 +0.4 2.4 DUF749 domain-containing protein compare
MMP_RS03965 +0.4 1.5 hypothetical protein compare
MMP_RS04265 +0.4 1.8 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS06660 +0.4 3.5 glycosyltransferase family 4 protein compare
MMP_RS00855 +0.4 2.2 DUF367 family protein compare
MMP_RS08390 +0.4 2.4 DUF5400 domain-containing protein compare
MMP_RS01460 +0.4 1.9 hypothetical protein compare
MMP_RS06430 +0.4 1.9 6-carboxytetrahydropterin synthase QueD compare
MMP_RS01635 +0.4 2.6 thiamine pyrophosphate-dependent enzyme compare
MMP_RS06570 +0.4 1.7 DUF190 domain-containing protein compare
MMP_RS07880 +0.4 2.0 AAA family ATPase compare
MMP_RS00380 +0.4 1.7 P-II family nitrogen regulator compare
MMP_RS02790 +0.4 0.7 class III signal peptide-containing protein compare
MMP_RS06440 +0.4 2.2 CBS domain-containing protein compare
MMP_RS08480 +0.4 2.6 molybdate ABC transporter substrate-binding protein compare
MMP_RS06860 +0.4 1.2 4Fe-4S binding protein compare
MMP_RS00290 +0.4 2.8 hypothetical protein compare
MMP_RS08260 +0.4 2.9 DUF99 family protein compare
MMP_RS03895 +0.4 1.8 hypothetical protein compare
MMP_RS01570 +0.4 1.0 hypothetical protein compare
MMP_RS07900 +0.4 1.0 YeeE/YedE family protein compare
MMP_RS07620 +0.4 1.8 energy-coupling factor ABC transporter substrate-binding protein compare
MMP_RS05665 +0.4 1.6 phosphate ABC transporter permease subunit PstC compare
MMP_RS02110 +0.4 0.9 hypothetical protein compare
MMP_RS08990 +0.4 2.4 hypothetical protein compare
MMP_RS06500 +0.4 1.7 ATP-binding protein compare
MMP_RS03800 +0.4 1.8 hypothetical protein compare
MMP_RS08245 +0.4 2.3 DUF4013 domain-containing protein compare
MMP_RS06655 +0.4 2.5 glycoside hydrolase family 15 protein compare
MMP_RS05945 +0.4 1.7 CBS domain-containing protein compare
MMP_RS01655 +0.4 0.9 DsrE family protein compare
MMP_RS02310 +0.4 1.0 RimK-like ATPgrasp N-terminal domain-containing protein compare
MMP_RS08485 +0.4 2.6 tungstate ABC transporter substrate-binding protein WtpA compare
MMP_RS06300 +0.4 2.5 ABC transporter substrate-binding protein compare
MMP_RS01980 +0.4 2.8 trimeric intracellular cation channel family protein compare
MMP_RS08670 +0.4 2.4 metallophosphoesterase compare
MMP_RS06155 +0.4 1.5 DUF4186 domain-containing protein compare
MMP_RS08080 +0.4 2.0 YchF/TatD family DNA exonuclease compare
MMP_RS07970 +0.4 1.6 hypothetical protein compare
MMP_RS07815 +0.3 0.7 DUF2120 domain-containing protein compare
MMP_RS08700 +0.3 1.8 hypothetical protein compare
MMP_RS02380 +0.3 2.2 ATP-binding protein compare
MMP_RS07715 +0.3 2.2 YfcE family phosphodiesterase compare
MMP_RS08160 +0.3 1.9 EamA family transporter compare
MMP_RS04205 +0.3 2.3 carboxymuconolactone decarboxylase family protein compare
MMP_RS09065 +0.3 2.8 hypothetical protein compare
MMP_RS07895 +0.3 1.8 cytochrome c compare
MMP_RS05715 +0.3 1.7 hypothetical protein compare
MMP_RS06150 +0.3 2.2 hypothetical protein compare
MMP_RS07835 +0.3 1.7 TldD/PmbA family protein compare
MMP_RS00400 +0.3 2.0 tributyrin esterase compare
MMP_RS00085 +0.3 2.2 DNA cytosine methyltransferase compare
MMP_RS07550 +0.3 2.4 L-serine ammonia-lyase iron-sulfur-dependent subunit alpha compare
MMP_RS02590 +0.3 2.0 low molecular weight phosphatase family protein compare
MMP_RS05825 +0.3 1.4 peptidyl-prolyl cis-trans isomerase compare
MMP_RS06335 +0.3 1.7 HAD family hydrolase compare
MMP_RS01685 +0.3 1.2 indolepyruvate oxidoreductase subunit beta compare
MMP_RS02295 +0.3 1.9 TatD family hydrolase compare
MMP_RS07985 +0.3 2.5 nitroreductase family protein compare
MMP_RS02815 +0.3 1.3 hypothetical protein compare
MMP_RS00665 +0.3 2.0 hypothetical protein compare
MMP_RS08860 +0.3 1.4 MinD/ParA family protein compare
MMP_RS08325 +0.3 2.1 hypothetical protein compare
MMP_RS08930 +0.3 0.5 hypothetical protein compare
MMP_RS05175 +0.3 1.9 hypothetical protein compare
MMP_RS07150 +0.3 1.7 MTH895/ArsE family thioredoxin-like protein compare
MMP_RS01195 +0.3 0.5 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS01130 +0.3 1.9 flavoprotein compare
MMP_RS08855 +0.3 1.9 hypothetical protein compare
MMP_RS01145 +0.3 2.2 ABC transporter ATP-binding protein compare
MMP_RS05975 +0.3 0.7 hypothetical protein compare
MMP_RS05970 +0.3 1.1 class II SORL domain-containing protein compare
MMP_RS04520 +0.3 1.3 nucleoside deaminase compare
MMP_RS02770 +0.3 2.0 hypothetical protein compare
MMP_RS06675 +0.3 1.9 ADP-specific phosphofructokinase compare
MMP_RS03675 +0.3 2.4 RimK family alpha-L-glutamate ligase compare
MMP_RS01200 +0.3 1.3 hypothetical protein compare
MMP_RS01280 +0.3 2.3 DUF515 domain-containing protein compare
MMP_RS08085 +0.3 2.2 hypothetical protein compare
MMP_RS07155 +0.3 2.1 MFS transporter compare
MMP_RS01290 +0.3 1.7 class III signal peptide-containing protein compare
MMP_RS06530 +0.3 1.4 bifunctional hexulose-6-phosphate synthase/ribonuclease regulator compare
MMP_RS08625 +0.3 1.9 type II/IV secretion system ATPase subunit compare
MMP_RS00325 +0.3 0.6 RNA-binding protein compare
MMP_RS00140 +0.3 1.3 DUF192 domain-containing protein compare
MMP_RS01470 +0.3 1.3 ATP-binding cassette domain-containing protein compare
MMP_RS00235 +0.3 1.7 HDIG domain-containing protein compare
MMP_RS08250 +0.3 2.2 pyruvate kinase compare
MMP_RS06910 +0.3 1.5 RlmF-related methyltransferase compare
MMP_RS01775 +0.3 0.7 TIGR00297 family protein compare
MMP_RS07590 +0.3 1.8 hypothetical protein compare
MMP_RS06585 +0.3 0.7 DMT family protein compare
MMP_RS08835 +0.3 1.8 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein compare
MMP_RS02360 +0.3 1.8 hypothetical protein compare
MMP_RS05235 +0.3 2.0 exodeoxyribonuclease III compare
MMP_RS08130 +0.3 1.5 IGHMBP2 family helicase compare
MMP_RS00940 +0.3 1.7 daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein compare
MMP_RS06965 +0.3 1.2 TIGR04014 family B12-binding domain/radical SAM domain-containing protein compare
MMP_RS05960 +0.3 1.8 CoB--CoM heterodisulfide reductase subunit B compare
MMP_RS01430 +0.3 1.4 mechanosensitive ion channel family protein compare
MMP_RS07775 +0.3 1.5 alanine dehydrogenase compare
MMP_RS07855 +0.2 1.8 class I SAM-dependent methyltransferase compare
MMP_RS06185 +0.2 1.4 thermonuclease family protein compare
MMP_RS08415 +0.2 1.0 radical SAM protein compare
MMP_RS07095 +0.2 0.8 PspC domain-containing protein compare
MMP_RS08205 +0.2 2.0 stage II sporulation protein M compare
MMP_RS07805 +0.2 1.3 ABC transporter permease compare
MMP_RS00155 +0.2 1.4 heavy metal-binding domain-containing protein compare
MMP_RS02645 +0.2 1.6 ArsR family transcriptional regulator compare
MMP_RS07615 +0.2 1.3 energy-coupling factor ABC transporter permease compare
MMP_RS01135 +0.2 1.7 molybdate ABC transporter substrate-binding protein compare
MMP_RS06305 +0.2 1.7 transporter substrate-binding domain-containing protein compare
MMP_RS08610 +0.2 1.7 flagellar protein F compare
MMP_RS07925 +0.2 0.8 haloacid dehalogenase compare
MMP_RS05980 +0.2 1.4 ferritin compare
MMP_RS05170 +0.2 1.2 lysine exporter LysO family protein compare
MMP_RS05270 +0.2 1.8 PEGA domain-containing protein compare
MMP_RS06080 +0.2 1.8 radical SAM protein compare
MMP_RS07100 +0.2 1.4 hypothetical protein compare
MMP_RS04735 +0.2 0.9 tautomerase family protein compare
MMP_RS08555 +0.2 1.0 hypothetical protein compare
MMP_RS00930 +0.2 1.4 ABC transporter permease compare
MMP_RS01835 +0.2 1.7 hypothetical protein compare
MMP_RS04015 +0.2 0.6 hypothetical protein compare
MMP_RS08430 +0.2 1.1 HAD family hydrolase compare
MMP_RS00145 +0.2 1.2 ATP-dependent Clp protease proteolytic subunit compare
MMP_RS01320 +0.2 1.3 hypothetical protein compare
MMP_RS07650 +0.2 1.7 TldD/PmbA family protein compare
MMP_RS05035 +0.2 1.1 hypothetical protein compare
MMP_RS03890 +0.2 1.5 DUF2540 domain-containing protein compare
MMP_RS05895 +0.2 1.5 metallophosphoesterase compare
MMP_RS08405 +0.2 1.6 MFS transporter compare
MMP_RS06560 +0.2 1.3 hypothetical protein compare
MMP_RS05155 +0.2 1.4 hypothetical protein compare
MMP_RS00945 +0.2 0.5 PadR family transcriptional regulator compare
MMP_RS03845 +0.2 1.3 DNA adenine methylase compare
MMP_RS04220 +0.2 1.2 queuosine precursor transporter compare
MMP_RS05795 +0.2 1.0 redox-regulated ATPase YchF compare
MMP_RS01215 +0.2 1.0 sodium/proline symporter PutP compare
MMP_RS00545 +0.2 1.2 XRE family transcriptional regulator compare
MMP_RS07595 +0.2 1.3 hypothetical protein compare
MMP_RS00660 +0.2 1.6 alkaline phosphatase family protein compare
MMP_RS00865 +0.2 1.1 SLC13 family permease compare
MMP_RS06555 +0.2 0.8 cupin domain-containing protein compare
MMP_RS08470 +0.2 1.1 ATP-binding cassette domain-containing protein compare
MMP_RS03575 +0.2 1.5 ECF transporter S component compare
MMP_RS08350 +0.2 0.2 hypothetical protein compare
MMP_RS06745 +0.2 1.0 DUF2119 domain-containing protein compare
MMP_RS03320 +0.2 0.6 metal-dependent transcriptional regulator compare
MMP_RS04980 +0.2 1.7 DUF2193 domain-containing protein compare
MMP_RS01855 +0.2 1.0 2-hydroxyacyl-CoA dehydratase family protein compare
MMP_RS06545 +0.2 0.7 ferredoxin family protein compare
MMP_RS01060 +0.2 1.5 calcium/sodium antiporter compare
MMP_RS02265 +0.2 0.8 nitroreductase family protein compare
MMP_RS03405 +0.2 1.1 RNA 3'-terminal phosphate cyclase compare
MMP_RS07125 +0.2 0.9 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS02375 +0.2 1.3 hypothetical protein compare
MMP_RS02325 +0.2 1.3 epoxyqueuosine reductase compare
MMP_RS04995 +0.2 1.1 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in nitrogen source experiments

For nitrogen source L-Glutamine across organisms