Experiment set6IT090 for Methanococcus maripaludis S2

Compare to:

H2 N-free with 10mM L-Glutamine

200 most important genes:

  gene name fitness t score description  
MMP_RS08720 -5.7 -3.0 4Fe-4S binding protein compare
MMP_RS05500 -5.4 -11.3 2-isopropylmalate synthase compare
MMP_RS03315 -4.8 -2.1 ferrous iron transport protein A compare
MMP_RS07345 -4.8 -11.3 glycine synthesis protein GlyXL (from data) compare
MMP_RS07845 -4.7 -3.5 LL-diaminopimelate aminotransferase compare
MMP_RS01020 -4.7 -1.7 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS01175 -4.5 -7.6 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS01455 -4.5 -11.3 nickel pincer cofactor biosynthesis protein LarC compare
MMP_RS08165 -4.5 -3.4 phosphoglycerate dehydrogenase compare
MMP_RS03600 -4.2 -4.3 triose-phosphate isomerase compare
MMP_RS03450 -4.1 -3.6 glycine synthesis protein GlyXS (from data) compare
MMP_RS06355 -4.1 -5.5 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS03015 -4.1 -16.5 GTP 3' 8-cyclase MoaA compare
MMP_RS02010 -4.0 -17.1 PHP domain-containing protein compare
MMP_RS07185 -4.0 -15.3 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS08300 -4.0 -2.2 metal-sulfur cluster assembly factor compare
MMP_RS07635 -3.7 -12.9 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS07630 -3.6 -2.4 ATP-binding cassette domain-containing protein compare
MMP_RS00695 -3.6 -1.9 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS06375 -3.6 -7.1 ATP-dependent sacrificial sulfur transferase LarE compare
MMP_RS07730 -3.5 -3.7 pyruvate synthase subunit beta compare
MMP_RS04215 -3.5 -9.2 nickel pincer cofactor biosynthesis protein LarB compare
MMP_RS02145 -3.5 -13.5 winged helix-turn-helix transcriptional regulator compare
MMP_RS05515 -3.5 -9.8 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS03035 -3.4 -6.6 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS03700 -3.4 -13.1 sodium:proton antiporter compare
MMP_RS06270 -3.3 -7.9 TIGR00300 family protein compare
MMP_RS01385 -3.3 -1.2 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS04615 -3.3 -7.1 PDGLE domain-containing protein compare
MMP_RS07435 -3.2 -3.0 GMP synthase subunit A compare
MMP_RS06120 -3.2 -3.3 UPF0147 family protein compare
MMP_RS04605 -3.2 -5.6 cobalt ECF transporter T component CbiQ compare
MMP_RS07755 -3.2 -2.3 DUF555 domain-containing protein compare
MMP_RS06400 -3.2 -2.5 4Fe-4S binding protein compare
MMP_RS01545 -3.2 -1.9 CBS domain-containing protein compare
MMP_RS00305 -3.1 -3.4 phosphoribosyl-ATP diphosphatase compare
MMP_RS05265 -3.1 -4.0 2-isopropylmalate synthase compare
MMP_RS00040 -3.1 -6.6 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS05555 -3.1 -2.6 DUF4040 domain-containing protein compare
MMP_RS05550 -3.0 -1.3 cation:proton antiporter compare
MMP_RS01500 -3.0 -4.9 CBS domain-containing protein compare
MMP_RS06475 -3.0 -6.3 FAD-dependent oxidoreductase compare
MMP_RS04790 -2.9 -16.3 4-hydroxy-tetrahydrodipicolinate reductase compare
MMP_RS01610 -2.9 -5.0 hypothetical protein compare
MMP_RS05250 -2.9 -2.6 NFYB/HAP3 family transcription factor subunit compare
MMP_RS06975 -2.8 -4.0 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS01265 -2.8 -3.8 hypothetical protein compare
MMP_RS03025 -2.8 -7.8 molybdenum cofactor guanylyltransferase compare
MMP_RS06350 -2.7 -12.0 HesA/MoeB/ThiF family protein compare
MMP_RS05425 -2.7 -6.7 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS02195 -2.7 -5.6 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS04890 -2.6 -1.6 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS08745 -2.6 -8.4 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS04620 -2.6 -12.4 cobalt transporter CbiM compare
MMP_RS07355 -2.6 -1.8 transcription factor S compare
MMP_RS08460 -2.6 -4.1 proteasome-activating nucleotidase compare
MMP_RS07605 -2.5 -6.4 diadenylate cyclase compare
MMP_RS08435 -2.5 -3.5 Era-like GTP-binding protein compare
MMP_RS01380 -2.5 -6.6 PHP domain-containing protein compare
MMP_RS00520 -2.5 -2.5 RNA polymerase Rpb4 family protein compare
MMP_RS06295 -2.5 -9.8 methanogenesis marker 14 protein compare
MMP_RS07420 -2.5 -4.7 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS01755 -2.5 -2.2 DUF2097 domain-containing protein compare
MMP_RS05930 -2.4 -3.2 3-isopropylmalate dehydratase large subunit compare
MMP_RS01795 -2.4 -2.4 methanogenesis marker 6 protein compare
MMP_RS02135 -2.4 -7.9 DUF5612 domain-containing protein compare
MMP_RS01225 -2.4 -8.6 DUF5379 domain-containing protein compare
MMP_RS02900 -2.4 -1.0 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS06285 -2.4 -3.7 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS08650 -2.4 -4.1 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS07735 -2.4 -1.6 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS06020 -2.4 -7.3 archaeoflavoprotein AfpA compare
MMP_RS04710 -2.3 -1.6 hypothetical protein compare
MMP_RS03475 -2.3 -1.1 hypothetical protein compare
MMP_RS01005 -2.3 -2.2 riboflavin synthase compare
MMP_RS02355 -2.3 -4.5 30S ribosomal protein S27ae compare
MMP_RS03400 -2.3 -4.1 archease compare
MMP_RS07545 -2.3 -2.1 HTH domain-containing protein compare
MMP_RS03435 -2.3 -2.5 ketol-acid reductoisomerase compare
MMP_RS02240 -2.2 -6.3 methanogenesis marker 7 protein compare
MMP_RS07390 -2.2 -4.0 cell division protein FtsZ compare
MMP_RS01220 -2.2 -10.8 hypothetical protein compare
MMP_RS04720 -2.2 -4.5 DedA family protein compare
MMP_RS07555 -2.2 -1.2 monovalent cation/H+ antiporter subunit E compare
MMP_RS01700 -2.2 -1.1 dihydroxy-acid dehydratase compare
MMP_RS06230 -2.2 -3.6 helix-turn-helix domain-containing protein compare
MMP_RS07005 -2.2 -1.1 4Fe-4S binding protein compare
MMP_RS01900 -2.2 -15.1 hypothetical protein compare
MMP_RS07075 -2.1 -6.0 phosphomannomutase/phosphoglucomutase compare
MMP_RS06925 -2.1 -3.3 ribonuclease VapC4 compare
MMP_RS07750 -2.1 -5.6 DUF357 domain-containing protein compare
MMP_RS01885 -2.1 -12.8 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS01725 -2.1 -6.6 class I SAM-dependent methyltransferase family protein compare
MMP_RS01955 -2.1 -4.1 hypothetical protein compare
MMP_RS01800 -2.1 -4.7 TIGR00303 family protein compare
MMP_RS07200 -2.0 -7.5 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS05640 -2.0 -9.3 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS06370 -2.0 -5.0 biotin synthase BioB compare
MMP_RS01905 -2.0 -14.4 glycosyltransferase compare
MMP_RS08790 -2.0 -3.2 translation initiation factor IF-2 subunit alpha compare
MMP_RS01925 -2.0 -10.0 DUF1616 domain-containing protein compare
MMP_RS04585 -2.0 -12.4 AIR synthase related protein compare
MMP_RS05925 -2.0 -5.4 small nuclear ribonucleoprotein compare
MMP_RS04500 -2.0 -13.6 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS00110 -2.0 -2.7 hypothetical protein compare
MMP_RS08635 -2.0 -2.7 UbiA family prenyltransferase compare
MMP_RS06625 -2.0 -2.9 DNA primase compare
MMP_RS06670 -2.0 -8.3 glucose-6-phosphate isomerase compare
MMP_RS07365 -2.0 -12.1 2-phosphoglycerate kinase compare
MMP_RS01975 -2.0 -14.7 hypothetical protein compare
MMP_RS07600 -2.0 -3.7 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS01875 -1.9 -13.2 N-acetyltransferase compare
MMP_RS02800 -1.9 -6.7 nucleotidyltransferase domain-containing protein compare
MMP_RS07380 -1.9 -3.1 transcription elongation factor Spt5 compare
MMP_RS00895 -1.9 -4.6 hypothetical protein compare
MMP_RS08500 -1.9 -6.3 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMP_RS06630 -1.9 -1.4 UPF0058 family protein compare
MMP_RS06725 -1.9 -11.6 hypothetical protein compare
MMP_RS05280 -1.9 -11.9 COG1361 S-layer family protein compare
MMP_RS06340 -1.9 -9.3 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS07710 -1.9 -8.1 cell division protein FtsZ compare
MMP_RS01830 -1.9 -3.0 tRNA-Val compare
MMP_RS05845 -1.8 -2.8 tRNA-intron lyase compare
MMP_RS03960 -1.8 -1.7 hypothetical protein compare
MMP_RS07580 -1.8 -4.1 DUF356 domain-containing protein compare
MMP_RS01880 -1.8 -7.6 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS08330 -1.8 -7.1 NADH-quinone oxidoreductase subunit H compare
MMP_RS05285 -1.7 -9.0 MMPL family transporter compare
MMP_RS01890 -1.7 -5.2 nucleotide sugar dehydrogenase compare
MMP_RS00300 -1.7 -1.2 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS03445 -1.7 -1.5 methanogenesis marker 17 protein compare
MMP_RS04900 -1.7 -14.2 hypothetical protein compare
MMP_RS03580 -1.7 -4.1 signal recognition particle-docking protein FtsY compare
MMP_RS06730 -1.7 -1.9 phosphopantothenate/pantothenate synthetase compare
MMP_RS01325 -1.7 -2.7 dihydroneopterin aldolase family protein compare
MMP_RS00750 -1.7 -2.6 fumarate hydratase compare
MMP_RS00985 -1.7 -4.5 CDC48 family AAA ATPase compare
MMP_RS08370 -1.7 -0.9 cation:proton antiporter subunit C compare
MMP_RS05540 -1.7 -2.7 hypothetical protein compare
MMP_RS07090 -1.7 -7.4 tRNA (adenine-N1)-methyltransferase compare
MMP_RS04955 -1.7 -6.6 DNA topoisomerase I compare
MMP_RS01895 -1.6 -12.6 flippase compare
MMP_RS07525 -1.6 -8.6 4Fe-4S binding protein compare
MMP_RS08095 -1.6 -5.8 dethiobiotin synthase compare
MMP_RS01970 -1.6 -11.7 TIGR04279 domain-containing protein compare
MMP_RS00515 -1.6 -1.2 DUF655 domain-containing protein compare
MMP_RS04685 -1.6 -3.1 DUF126 domain-containing protein compare
MMP_RS08105 -1.5 -7.1 6-carboxyhexanoate--CoA ligase compare
MMP_RS00685 -1.5 -4.1 2-phospho-L-lactate guanylyltransferase compare
MMP_RS02345 -1.5 -3.1 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS08715 -1.5 -1.4 formylmethanofuran dehydrogenase subunit B compare
MMP_RS01910 -1.5 -9.0 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMP_RS00810 -1.5 -8.7 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS07955 -1.5 -6.2 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS04780 -1.5 -2.9 ribonuclease P compare
MMP_RS07705 -1.5 -7.6 transcriptional regulator compare
MMP_RS06865 -1.5 -1.9 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMP_RS07575 -1.5 -3.0 RNA ligase partner protein compare
MMP_RS06885 -1.5 -2.7 50S ribosome-binding GTPase compare
MMP_RS01915 -1.5 -10.3 DUF354 domain-containing protein compare
MMP_RS03145 -1.4 -6.4 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase compare
MMP_RS06215 -1.4 -3.0 30S ribosomal protein S6e compare
MMP_RS06105 -1.4 -7.1 hydrogenase maturation peptidase HycI compare
MMP_RS00320 -1.4 -2.7 class I SAM-dependent methyltransferase compare
MMP_RS04785 -1.4 -8.7 hypothetical protein compare
MMP_RS07875 -1.4 -5.1 hypothetical protein compare
MMP_RS00375 -1.4 -7.3 ammonium transporter compare
MMP_RS02280 -1.4 -1.3 DUF211 domain-containing protein compare
MMP_RS00915 -1.4 -6.4 DUF116 domain-containing protein compare
MMP_RS01960 -1.4 -1.2 hypothetical protein compare
MMP_RS02245 -1.4 -3.7 hypothetical protein compare
MMP_RS08210 -1.4 -2.0 phosphatidylglycerophosphatase A compare
MMP_RS06840 -1.4 -1.2 DNA-directed RNA polymerase subunit N compare
MMP_RS08595 -1.4 -1.6 flagellar protein C compare
MMP_RS06940 -1.4 -3.1 polyprenyl diphosphate synthase compare
MMP_RS05245 -1.4 -8.7 archaeosine biosynthesis radical SAM protein RaSEA compare
MMP_RS07540 -1.4 -2.9 CBS domain-containing protein compare
MMP_RS08100 -1.4 -5.3 8-amino-7-oxononanoate synthase compare
MMP_RS01335 -1.4 -3.1 prefoldin subunit beta compare
MMP_RS06980 -1.4 -5.6 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMP_RS04775 -1.3 -3.9 adenosylhomocysteinase compare
MMP_RS03140 -1.3 -8.9 hypothetical protein compare
MMP_RS03640 -1.3 -4.7 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS02930 -1.3 -4.5 class I SAM-dependent methyltransferase compare
MMP_RS03485 -1.3 -3.8 TIGR00267 family protein compare
MMP_RS05345 -1.3 -5.2 hypothetical protein compare
MMP_RS03250 -1.3 -3.4 MJ1244 family protein compare
MMP_RS05920 -1.3 -0.8 50S ribosomal protein L37e compare
MMP_RS04485 -1.3 -8.9 putative beta-lysine N-acetyltransferase compare
MMP_RS08320 -1.3 -4.5 molybdopterin molybdotransferase MoeA compare
MMP_RS06395 -1.3 -4.0 ThiF family adenylyltransferase compare
MMP_RS01365 -1.3 -2.9 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS00720 -1.2 -7.1 metal-dependent hydrolase compare
MMP_RS05430 -1.2 -4.0 TIGR00288 family NYN domain-containing protein compare
MMP_RS06130 -1.2 -2.8 peptidylprolyl isomerase compare
MMP_RS01920 -1.2 -9.5 glycosyltransferase family 2 protein compare
MMP_RS08820 -1.2 -4.6 hypothetical protein compare
MMP_RS00555 -1.2 -6.1 MFS transporter compare
MMP_RS05815 -1.2 -1.6 NOL1/NOP2/sun family putative RNA methylase compare
MMP_RS07645 -1.2 -4.1 aldehyde dehydrogenase family protein compare


Specific Phenotypes

For 1 genes in this experiment

For nitrogen source L-Glutamine in Methanococcus maripaludis S2

For nitrogen source L-Glutamine across organisms