Experiment set6IT089 for Pseudomonas fluorescens FW300-N2E3

Compare to:

L-Arginine nitrogen source

200 most important genes:

  gene name fitness t score description  
AO353_02070 -4.5 -4.4 prephenate dehydratase compare
AO353_20695 -4.5 -6.1 O-succinylhomoserine sulfhydrylase compare
AO353_02995 -4.5 -8.0 succinylglutamate desuccinylase compare
AO353_12090 -4.2 -2.9 imidazole glycerol phosphate synthase subunit HisF compare
AO353_05115 -4.1 -8.8 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
AO353_03025 -4.1 -5.6 acetylornithine aminotransferase compare
AO353_20625 -4.1 -3.9 3-isopropylmalate dehydratase compare
AO353_13070 -4.1 -4.0 phosphoserine phosphatase compare
AO353_20665 -4.1 -8.6 N-(5'-phosphoribosyl)anthranilate isomerase compare
AO353_12070 -4.0 -6.7 imidazoleglycerol-phosphate dehydratase compare
AO353_20635 -3.9 -10.9 3-isopropylmalate dehydrogenase compare
AO353_07230 -3.9 -15.0 anthranilate synthase compare
AO353_20620 -3.8 -7.6 isopropylmalate isomerase compare
AO353_07220 -3.7 -8.6 anthranilate synthase compare
AO353_08345 -3.7 -8.1 dihydroxy-acid dehydratase compare
AO353_22800 -3.6 -3.5 sulfite reductase compare
AO353_05110 -3.6 -10.5 histidinol dehydrogenase compare
AO353_20540 -3.6 -8.3 aromatic amino acid aminotransferase compare
AO353_08475 -3.6 -9.2 phosphoserine phosphatase compare
AO353_13165 -3.6 -5.5 ATP phosphoribosyltransferase regulatory subunit compare
AO353_14505 -3.5 -11.5 ketol-acid reductoisomerase compare
AO353_08180 -3.5 -12.6 homoserine O-acetyltransferase compare
AO353_27500 -3.5 -3.4 hypothetical protein compare
AO353_02685 -3.5 -2.4 phosphoribosylglycinamide formyltransferase compare
AO353_09285 -3.5 -10.5 reactive intermediate/imine deaminase compare
AO353_12085 -3.5 -7.8 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
AO353_12075 -3.5 -8.1 imidazole glycerol phosphate synthase subunit HisH compare
AO353_00310 -3.5 -8.6 transaldolase compare
AO353_14220 -3.5 -2.4 ribosomal large subunit pseudouridine synthase D compare
AO353_03360 -3.4 -7.9 glucose-6-phosphate dehydrogenase compare
AO353_10670 -3.4 -7.8 shikimate dehydrogenase compare
AO353_03005 -3.4 -6.8 succinylarginine dihydrolase compare
AO353_07210 -3.4 -5.6 indole-3-glycerol-phosphate synthase compare
AO353_19060 -3.3 -5.0 CysB family transcriptional regulator compare
AO353_05075 -3.2 -11.7 adenylylsulfate kinase compare
AO353_10710 -3.2 -4.4 tryptophan synthase subunit beta compare
AO353_14495 -3.2 -9.7 acetolactate synthase 3 catalytic subunit compare
AO353_14500 -3.2 -7.0 acetolactate synthase 3 regulatory subunit compare
AO353_07215 -3.1 -8.3 anthranilate phosphoribosyltransferase compare
AO353_05105 -3.1 -11.1 histidinol-phosphate aminotransferase compare
AO353_08185 -3.0 -10.4 methionine biosynthesis protein MetW compare
AO353_05080 -3.0 -11.8 sulfate adenylyltransferase compare
AO353_12360 -3.0 -9.2 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
AO353_03010 -2.8 -5.8 succinylglutamate-semialdehyde dehydrogenase compare
AO353_15925 -2.8 -11.2 2-isopropylmalate synthase compare
AO353_07525 -2.8 -14.3 biotin synthase compare
AO353_12500 -2.7 -1.9 shikimate kinase compare
AO353_08015 -2.7 -7.4 5,10-methylenetetrahydrofolate reductase compare
AO353_13610 -2.7 -4.8 precorrin isomerase compare
AO353_02075 -2.7 -11.1 3-phosphoserine/phosphohydroxythreonine aminotransferase compare
AO353_12115 -2.7 -2.6 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
AO353_14115 -2.6 -6.9 gamma-glutamyl kinase compare
AO353_09720 -2.6 -2.5 hypothetical protein compare
AO353_14400 -2.6 -3.1 Fis family transcriptional regulator compare
AO353_08780 -2.6 -8.6 5-formyltetrahydrofolate cyclo-ligase compare
AO353_09250 -2.5 -3.4 exodeoxyribonuclease III compare
AO353_02640 -2.5 -2.9 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
AO353_00825 -2.5 -4.7 porin compare
AO353_11730 -2.5 -10.4 glutamate--cysteine ligase compare
AO353_10705 -2.4 -4.6 tryptophan synthase subunit alpha compare
AO353_10495 -2.4 -4.0 serine hydroxymethyltransferase compare
AO353_03015 -2.4 -5.4 arginine N-succinyltransferase compare
AO353_08045 -2.3 -13.6 adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
AO353_08510 -2.3 -5.3 3-phosphoglycerate dehydrogenase compare
AO353_07510 -2.3 -9.3 malonyl-[acyl-carrier protein] O-methyltransferase BioC compare
AO353_09040 -2.3 -2.0 diaminopimelate epimerase compare
AO353_07520 -2.3 -11.9 8-amino-7-oxononanoate synthase compare
AO353_17165 -2.2 -3.5 ATP-dependent helicase compare
AO353_08165 -2.2 -3.3 pyrroline-5-carboxylate reductase compare
AO353_12880 -2.2 -2.4 ADP-heptose--LPS heptosyltransferase compare
AO353_00495 -2.2 -2.9 DNA topoisomerase I compare
AO353_10025 -2.2 -12.7 pyruvate carboxylase subunit B compare
AO353_05625 -2.2 -1.9 transcription elongation factor GreA compare
AO353_06495 -2.2 -5.9 gamma-glutamyl phosphate reductase compare
AO353_10030 -2.2 -10.2 pyruvate carboxylase subunit A compare
AO353_03050 -2.1 -6.8 ABC transporter for L-Arginine and L-Citrulline, permease component 2 (from data) compare
AO353_13225 -2.1 -3.9 50S ribosomal protein L9 compare
AO353_18325 -2.1 -3.6 hypothetical protein compare
AO353_08885 -2.1 -12.1 polyphosphate kinase compare
AO353_13605 -2.0 -9.5 oxidoreductase compare
AO353_10035 -2.0 -7.8 LysR family transcriptional regulator compare
AO353_07505 -2.0 -7.4 dethiobiotin synthetase compare
AO353_01375 -2.0 -5.9 phosphate acyltransferase compare
AO353_09890 -2.0 -5.5 phosphate ABC transporter ATP-binding protein compare
AO353_10505 -2.0 -4.2 hypothetical protein compare
AO353_14775 -2.0 -6.5 hypothetical protein compare
AO353_14370 -2.0 -6.6 glucose-6-phosphate isomerase compare
AO353_16210 -1.9 -10.7 XRE family transcriptional regulator compare
AO353_07315 -1.9 -2.8 rRNA methyltransferase compare
AO353_06155 -1.9 -7.5 copper-transporting ATPase compare
AO353_12365 -1.9 -4.0 phosphoribosyl-AMP cyclohydrolase compare
AO353_16940 -1.9 -5.2 deoxycytidine triphosphate deaminase compare
AO353_04355 -1.9 -2.5 homoserine dehydrogenase compare
AO353_03420 -1.9 -4.9 phosphogluconate dehydratase compare
AO353_15185 -1.9 -5.1 ATPase compare
AO353_02710 -1.9 -9.8 (p)ppGpp synthetase compare
AO353_07355 -1.8 -5.9 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase compare
AO353_02000 -1.8 -4.2 polysaccharide/polyol phosphate ABC transporter ATP-binding protein compare
AO353_03415 -1.8 -5.4 glucokinase compare
AO353_03615 -1.8 -3.1 cold-shock protein compare
AO353_13100 -1.8 -2.1 GTPase RsgA compare
AO353_13140 -1.8 -5.6 tRNA dimethylallyltransferase compare
AO353_12515 -1.7 -12.8 glutamate synthase compare
AO353_03580 -1.7 -3.6 ATP-dependent DNA helicase RuvB compare
AO353_13600 -1.7 -3.1 precorrin-6Y C5,15-methyltransferase compare
AO353_08110 -1.7 -6.1 glutathione synthetase compare
AO353_24340 -1.7 -1.6 TetR family transcriptional regulator compare
AO353_12690 -1.7 -1.5 acyl carrier protein compare
AO353_08880 -1.7 -2.5 exopolyphosphatase compare
AO353_14595 -1.7 -6.9 carbonate dehydratase compare
AO353_12510 -1.7 -8.9 cell division protein compare
AO353_02060 -1.7 -3.4 3-phosphoshikimate 1-carboxyvinyltransferase compare
AO353_02720 -1.7 -4.4 cysteine synthase compare
AO353_00750 -1.6 -3.1 GntR family transcriptional regulator compare
AO353_06040 -1.6 -3.0 exodeoxyribonuclease V subunit alpha compare
AO353_20590 -1.6 -2.6 hydrolase compare
AO353_22920 -1.6 -4.5 GntR family transcriptional regulator compare
AO353_10445 -1.6 -2.1 tRNA uridine 5-carboxymethylaminomethyl modification protein compare
AO353_12520 -1.6 -7.3 glutamate synthase compare
AO353_13640 -1.6 -4.2 histidine kinase compare
AO353_13155 -1.6 -3.6 hypothetical protein compare
AO353_13200 -1.5 -8.6 exoribonuclease R compare
AO353_12105 -1.5 -5.6 peptidase S41 compare
AO353_14395 -1.5 -4.2 poly(A) polymerase compare
AO353_05520 -1.5 -5.2 nicotinate-nucleotide pyrophosphorylase compare
AO353_06050 -1.5 -5.9 exodeoxyribonuclease V subunit gamma compare
AO353_00460 -1.5 -2.7 TetR family transcriptional regulator compare
AO353_20660 -1.5 -3.1 pseudouridine synthase compare
AO353_08485 -1.4 -8.7 threonine dehydratase compare
AO353_23785 -1.4 -2.2 hypothetical protein compare
AO353_11455 -1.4 -2.4 hypothetical protein compare
AO353_23495 -1.4 -2.1 SAM-dependent methyltransferase compare
AO353_03245 -1.4 -5.5 permease DsdX compare
AO353_12345 -1.4 -1.8 twin-arginine protein translocation system subunit TatC compare
AO353_02605 -1.4 -5.2 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
AO353_03425 -1.4 -6.6 glyceraldehyde-3-phosphate dehydrogenase compare
AO353_05690 -1.4 -3.0 SsrA-binding protein compare
AO353_08980 -1.4 -2.7 heme biosynthesis operon protein HemX compare
AO353_10945 -1.4 -2.4 cytochrome C compare
AO353_11850 -1.4 -3.5 3'(2'),5'-bisphosphate nucleotidase CysQ compare
AO353_13620 -1.3 -7.5 precorrin-3B C17-methyltransferase compare
AO353_23400 -1.3 -2.4 hypothetical protein compare
AO353_10730 -1.3 -2.0 hypothetical protein compare
AO353_06045 -1.3 -5.8 exodeoxyribonuclease V subunit beta compare
AO353_19360 -1.3 -2.5 peroxiredoxin compare
AO353_09135 -1.3 -2.1 cytochrome C compare
AO353_10940 -1.3 -3.2 cytochrome compare
AO353_22810 -1.3 -1.5 hypothetical protein compare
AO353_11770 -1.3 -1.9 molecular chaperone Hsp33 compare
AO353_15250 -1.3 -2.9 cytochrome B compare
AO353_03525 -1.3 -6.4 quinolinate synthase A compare
AO353_14420 -1.3 -3.3 molecular chaperone DnaK compare
AO353_02975 -1.3 -2.4 aspartate kinase compare
AO353_10510 -1.3 -1.7 benzoate transporter compare
AO353_00650 -1.2 -2.3 cytochrome biogenesis protein compare
AO353_20095 -1.2 -3.9 histidine kinase compare
AO353_20370 -1.2 -2.8 MerR family transcriptional regulator compare
AO353_03055 -1.2 -5.1 ABC transporter for L-Arginine and L-Citrulline, periplasmic substrate-binding component (from data) compare
AO353_03045 -1.2 -6.1 ABC transporter for L-Arginine and L-Citrulline, permease component 1 (from data) conserved
AO353_02595 -1.2 -2.6 cobalamin synthase compare
AO353_03040 -1.2 -4.6 ABC transporter for L-Arginine and L-Citrulline, ATPase component (from data) conserved
AO353_10515 -1.2 -6.4 3-phosphoserine/phosphohydroxythreonine aminotransferase compare
AO353_12015 -1.2 -2.0 antitoxin compare
AO353_21625 -1.2 -2.0 Fe/S biogenesis protein NfuA compare
AO353_08100 -1.2 -2.9 chemotaxis protein CheY compare
AO353_13420 -1.2 -1.7 hypothetical protein compare
AO353_01410 -1.2 -2.5 ribonuclease E compare
AO353_03020 -1.2 -4.0 arginine N-succinyltransferase compare
AO353_03830 -1.2 -2.2 antibiotic biosynthesis monooxygenase compare
AO353_13720 -1.1 -8.4 arginine decarboxylase compare
AO353_04650 -1.1 -1.6 molybdenum cofactor biosynthesis protein MoaE compare
AO353_08265 -1.1 -4.0 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD compare
AO353_02625 -1.1 -6.6 cobalamin biosynthesis protein CobD compare
AO353_13925 -1.1 -1.8 XRE family transcriptional regulator compare
AO353_10040 -1.1 -5.6 transcriptional regulator compare
AO353_24260 -1.1 -1.6 hypothetical protein compare
AO353_17620 -1.1 -8.3 L-aspartate oxidase compare
AO353_04565 -1.1 -4.4 nucleoid-associated protein compare
AO353_21660 -1.1 -6.5 cobalamin biosynthesis protein CobN compare
AO353_12915 -1.1 -4.5 carbamoyltransferase compare
AO353_06720 -1.1 -1.9 NrdR family transcriptional regulator compare
AO353_06325 -1.1 -2.0 hypothetical protein compare
AO353_08130 -1.1 -1.8 uracil phosphoribosyltransferase compare
AO353_20410 -1.1 -2.0 hypothetical protein compare
AO353_20175 -1.1 -2.6 ATP-dependent Clp protease proteolytic subunit compare
AO353_02635 -1.1 -5.0 cobyrinic acid a,c-diamide synthase compare
AO353_09015 -1.1 -2.5 DNA-binding protein compare
AO353_01350 -1.1 -4.4 4-amino-4-deoxychorismate lyase compare
AO353_10435 -1.1 -5.8 chromosome partitioning protein compare
AO353_10520 -1.1 -3.4 GntR family transcriptional regulator compare
AO353_01355 -1.1 -4.9 3-oxoacyl-ACP synthase compare
AO353_17035 -1.0 -3.2 hypothetical protein compare
AO353_20200 -1.0 -2.9 peptidylprolyl isomerase compare
AO353_07515 -1.0 -1.8 transporter compare
AO353_07075 -1.0 -2.9 elongation factor Tu compare
AO353_28930 -1.0 -1.5 hypothetical protein compare
AO353_00600 -1.0 -4.1 cytochrome C oxidase Cbb3 compare
AO353_09050 -1.0 -2.4 recombinase XerC compare
AO353_13005 -1.0 -5.9 channel protein TolC compare
AO353_12080 -1.0 -2.2 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare


Specific Phenotypes

For 1 genes in this experiment

For nitrogen source L-Arginine in Pseudomonas fluorescens FW300-N2E3

For nitrogen source L-Arginine across organisms