Experiment set6IT087 for Pseudomonas fluorescens FW300-N2E3

Compare to:

L-Glutamine nitrogen source

200 most important genes:

  gene name fitness t score description  
AO353_20625 -4.8 -3.3 3-isopropylmalate dehydratase compare
AO353_12090 -4.6 -3.2 imidazole glycerol phosphate synthase subunit HisF compare
AO353_02070 -4.5 -8.1 prephenate dehydratase compare
AO353_05115 -4.3 -11.4 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
AO353_21630 -4.2 -4.1 precorrin-4 C11-methyltransferase compare
AO353_20695 -4.2 -8.4 O-succinylhomoserine sulfhydrylase compare
AO353_13100 -4.1 -2.8 GTPase RsgA compare
AO353_20540 -4.1 -10.1 aromatic amino acid aminotransferase compare
AO353_08180 -4.0 -14.7 homoserine O-acetyltransferase compare
AO353_20665 -4.0 -12.0 N-(5'-phosphoribosyl)anthranilate isomerase compare
AO353_10670 -4.0 -8.9 shikimate dehydrogenase compare
AO353_07230 -4.0 -18.0 anthranilate synthase compare
AO353_12070 -4.0 -9.6 imidazoleglycerol-phosphate dehydratase compare
AO353_12075 -3.9 -9.4 imidazole glycerol phosphate synthase subunit HisH compare
AO353_12085 -3.9 -9.0 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
AO353_20635 -3.8 -14.4 3-isopropylmalate dehydrogenase compare
AO353_07220 -3.8 -9.8 anthranilate synthase compare
AO353_12365 -3.8 -5.2 phosphoribosyl-AMP cyclohydrolase compare
AO353_08685 -3.8 -9.8 N-acetylglutamate synthase compare
AO353_08185 -3.8 -12.0 methionine biosynthesis protein MetW compare
AO353_09240 -3.8 -2.6 acetylglutamate kinase compare
AO353_14505 -3.7 -13.9 ketol-acid reductoisomerase compare
AO353_13070 -3.7 -8.8 phosphoserine phosphatase compare
AO353_13165 -3.6 -6.9 ATP phosphoribosyltransferase regulatory subunit compare
AO353_02975 -3.6 -4.2 aspartate kinase compare
AO353_08475 -3.6 -11.6 phosphoserine phosphatase compare
AO353_08345 -3.6 -11.0 dihydroxy-acid dehydratase compare
AO353_20620 -3.5 -7.5 isopropylmalate isomerase compare
AO353_14500 -3.4 -8.8 acetolactate synthase 3 regulatory subunit compare
AO353_05110 -3.4 -13.1 histidinol dehydrogenase compare
AO353_10710 -3.4 -6.1 tryptophan synthase subunit beta compare
AO353_07215 -3.3 -9.5 anthranilate phosphoribosyltransferase compare
AO353_09285 -3.3 -13.5 reactive intermediate/imine deaminase compare
AO353_19060 -3.3 -7.3 CysB family transcriptional regulator compare
AO353_12360 -3.3 -11.1 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
AO353_07210 -3.2 -6.9 indole-3-glycerol-phosphate synthase compare
AO353_03360 -3.2 -10.4 glucose-6-phosphate dehydrogenase compare
AO353_04155 -3.2 -14.3 ornithine carbamoyltransferase compare
AO353_09000 -3.2 -7.0 argininosuccinate lyase compare
AO353_12500 -3.1 -2.1 shikimate kinase compare
AO353_14495 -3.1 -13.3 acetolactate synthase 3 catalytic subunit compare
AO353_02640 -3.1 -3.2 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
AO353_08015 -3.0 -9.0 5,10-methylenetetrahydrofolate reductase compare
AO353_16210 -3.0 -15.0 XRE family transcriptional regulator compare
AO353_08510 -3.0 -5.6 3-phosphoglycerate dehydrogenase compare
AO353_15250 -2.9 -4.0 cytochrome B compare
AO353_15925 -2.9 -11.6 2-isopropylmalate synthase compare
AO353_14115 -2.8 -8.6 gamma-glutamyl kinase compare
AO353_05075 -2.8 -13.3 adenylylsulfate kinase compare
AO353_00310 -2.8 -11.8 transaldolase compare
AO353_02075 -2.8 -12.9 3-phosphoserine/phosphohydroxythreonine aminotransferase compare
AO353_05105 -2.8 -11.4 histidinol-phosphate aminotransferase compare
AO353_01375 -2.8 -8.4 phosphate acyltransferase compare
AO353_12460 -2.8 -10.5 malate dehydrogenase compare
AO353_22800 -2.7 -4.4 sulfite reductase compare
AO353_06155 -2.7 -10.9 copper-transporting ATPase compare
AO353_13605 -2.7 -11.8 oxidoreductase compare
AO353_07525 -2.7 -15.7 biotin synthase compare
AO353_14400 -2.6 -4.7 Fis family transcriptional regulator compare
AO353_08165 -2.6 -4.3 pyrroline-5-carboxylate reductase compare
AO353_07355 -2.6 -7.2 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase compare
AO353_04105 -2.5 -10.8 argininosuccinate synthase compare
AO353_02595 -2.5 -3.6 cobalamin synthase compare
AO353_00825 -2.5 -6.1 porin compare
AO353_02605 -2.5 -8.0 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
AO353_05080 -2.5 -13.1 sulfate adenylyltransferase compare
AO353_08780 -2.4 -8.6 5-formyltetrahydrofolate cyclo-ligase compare
AO353_03795 -2.4 -6.2 fumarate hydratase compare
AO353_10025 -2.4 -14.5 pyruvate carboxylase subunit B compare
AO353_13590 -2.4 -6.4 cobalt-precorrin-6X reductase compare
AO353_06495 -2.4 -6.7 gamma-glutamyl phosphate reductase compare
AO353_02600 -2.3 -4.0 alpha-ribazole phosphatase compare
AO353_00650 -2.3 -3.9 cytochrome biogenesis protein compare
AO353_16940 -2.2 -6.5 deoxycytidine triphosphate deaminase compare
AO353_10945 -2.2 -3.3 cytochrome C compare
AO353_21625 -2.2 -3.5 Fe/S biogenesis protein NfuA compare
AO353_02610 -2.2 -8.1 adenosylcobinamide kinase compare
AO353_07155 -2.2 -8.4 N-acetyl-gamma-glutamyl-phosphate reductase compare
AO353_13610 -2.2 -4.7 precorrin isomerase compare
AO353_02625 -2.2 -11.2 cobalamin biosynthesis protein CobD compare
AO353_09890 -2.1 -6.5 phosphate ABC transporter ATP-binding protein compare
AO353_07520 -2.1 -12.8 8-amino-7-oxononanoate synthase compare
AO353_13620 -2.0 -11.1 precorrin-3B C17-methyltransferase compare
AO353_08045 -2.0 -13.0 adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
AO353_02615 -2.0 -8.1 cobyric acid synthase compare
AO353_07510 -2.0 -9.6 malonyl-[acyl-carrier protein] O-methyltransferase BioC compare
AO353_10030 -2.0 -9.8 pyruvate carboxylase subunit A compare
AO353_02720 -2.0 -5.8 cysteine synthase compare
AO353_12105 -1.9 -7.2 peptidase S41 compare
AO353_02250 -1.9 -4.5 chorismate synthase compare
AO353_10510 -1.9 -2.6 benzoate transporter compare
AO353_14220 -1.9 -2.5 ribosomal large subunit pseudouridine synthase D compare
AO353_21660 -1.9 -11.5 cobalamin biosynthesis protein CobN compare
AO353_02635 -1.9 -7.1 cobyrinic acid a,c-diamide synthase compare
AO353_01410 -1.9 -4.0 ribonuclease E compare
AO353_10035 -1.9 -7.2 LysR family transcriptional regulator compare
AO353_13615 -1.9 -12.2 precorrin-2 C20-methyltransferase compare
AO353_03590 -1.9 -4.0 crossover junction endodeoxyribonuclease RuvC compare
AO353_07645 -1.8 -2.1 sarcosine oxidase subunit gamma compare
AO353_07505 -1.8 -8.1 dethiobiotin synthetase compare
AO353_09040 -1.8 -2.3 diaminopimelate epimerase compare
AO353_18890 -1.8 -5.5 cytochrome C compare
AO353_14595 -1.8 -8.5 carbonate dehydratase compare
AO353_10495 -1.7 -4.6 serine hydroxymethyltransferase compare
AO353_06160 -1.7 -5.3 transcriptional regulator compare
AO353_02620 -1.7 -5.4 threonine-phosphate decarboxylase compare
AO353_21665 -1.7 -5.8 magnesium chelatase compare
AO353_10705 -1.7 -4.7 tryptophan synthase subunit alpha compare
AO353_21655 -1.7 -3.4 cobalamin biosynthesis protein CobW compare
AO353_13160 -1.6 -2.8 membrane protease HflC compare
AO353_00660 -1.6 -3.3 transcriptional regulator compare
AO353_03415 -1.6 -5.2 glucokinase compare
AO353_12510 -1.6 -8.7 cell division protein compare
AO353_02685 -1.6 -3.8 phosphoribosylglycinamide formyltransferase compare
AO353_28425 -1.6 -4.1 TetR family transcriptional regulator compare
AO353_19750 -1.6 -2.8 diaminopimelate epimerase compare
AO353_19295 -1.6 -2.3 hypothetical protein compare
AO353_19360 -1.5 -3.2 peroxiredoxin compare
AO353_00750 -1.5 -4.4 GntR family transcriptional regulator compare
AO353_05135 -1.4 -7.4 toluene tolerance protein compare
AO353_19770 -1.4 -2.1 peptidase compare
AO353_24130 -1.4 -3.3 hypothetical protein compare
AO353_21615 -1.4 -8.7 methionine synthase compare
AO353_08350 -1.4 -6.5 hypothetical protein compare
AO353_12420 -1.4 -3.9 predicted FeS cluster maintenance protein (from data) compare
AO353_12115 -1.3 -2.5 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
AO353_14775 -1.3 -5.9 hypothetical protein compare
AO353_12935 -1.3 -4.1 glycosyltransferase compare
AO353_09875 -1.3 -2.3 hypothetical protein compare
AO353_10515 -1.3 -7.0 3-phosphoserine/phosphohydroxythreonine aminotransferase compare
AO353_02060 -1.3 -3.3 3-phosphoshikimate 1-carboxyvinyltransferase compare
AO353_14420 -1.3 -3.9 molecular chaperone DnaK compare
AO353_01355 -1.3 -6.3 3-oxoacyl-ACP synthase compare
AO353_14395 -1.3 -3.8 poly(A) polymerase compare
AO353_10455 -1.3 -2.1 tRNA modification GTPase MnmE compare
AO353_07515 -1.2 -2.3 transporter compare
AO353_06050 -1.2 -5.8 exodeoxyribonuclease V subunit gamma compare
AO353_18985 -1.2 -3.9 hypothetical protein compare
AO353_12930 -1.2 -3.3 GlcNAc-PI de-N-acetylase compare
AO353_00610 -1.2 -2.3 cytochrome C oxidase Cbb3 compare
AO353_06045 -1.2 -5.9 exodeoxyribonuclease V subunit beta compare
AO353_06720 -1.2 -2.3 NrdR family transcriptional regulator compare
AO353_14485 -1.2 -1.7 pseudouridine synthase compare
AO353_05690 -1.2 -2.8 SsrA-binding protein compare
AO353_06040 -1.2 -2.8 exodeoxyribonuclease V subunit alpha compare
AO353_23620 -1.2 -2.8 hypothetical protein compare
AO353_03020 -1.2 -5.5 arginine N-succinyltransferase compare
AO353_09955 -1.2 -8.9 sodium:alanine symporter compare
AO353_15905 -1.1 -5.6 outer membrane protein assembly factor BamB compare
AO353_00495 -1.1 -1.9 DNA topoisomerase I compare
AO353_10520 -1.1 -4.7 GntR family transcriptional regulator compare
AO353_22920 -1.1 -3.6 GntR family transcriptional regulator compare
AO353_09135 -1.1 -2.1 cytochrome C compare
AO353_17165 -1.1 -3.0 ATP-dependent helicase compare
AO353_00585 -1.1 -7.6 cytochrome C oxidase Cbb3 compare
AO353_15185 -1.1 -3.2 ATPase compare
AO353_13640 -1.1 -2.8 histidine kinase compare
AO353_09045 -1.1 -1.7 hypothetical protein compare
AO353_12080 -1.1 -2.8 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
AO353_03420 -1.1 -3.6 phosphogluconate dehydratase compare
AO353_19760 -1.1 -3.4 6-carboxy-5,6,7,8-tetrahydropterin synthase compare
AO353_00330 -1.1 -5.8 hypothetical protein compare
AO353_23910 -1.0 -2.9 response regulator compare
AO353_04355 -1.0 -1.9 homoserine dehydrogenase compare
AO353_06455 -1.0 -2.5 D-alanyl-D-alanine carboxypeptidase compare
AO353_10715 -1.0 -4.5 LysR family transcriptional regulator compare
AO353_00600 -1.0 -4.7 cytochrome C oxidase Cbb3 compare
AO353_13225 -1.0 -2.8 50S ribosomal protein L9 compare
AO353_13600 -1.0 -2.6 precorrin-6Y C5,15-methyltransferase compare
AO353_02710 -1.0 -6.5 (p)ppGpp synthetase compare
AO353_24595 -1.0 -2.0 hypothetical protein compare
AO353_04565 -1.0 -4.4 nucleoid-associated protein compare
AO353_10500 -0.9 -2.7 acetylornithine aminotransferase compare
AO353_27650 -0.9 -3.3 cell division protein FtsK compare
AO353_08470 -0.9 -3.7 RNA pyrophosphohydrolase compare
AO353_03615 -0.9 -2.5 cold-shock protein compare
AO353_07315 -0.9 -1.9 rRNA methyltransferase compare
AO353_00590 -0.9 -3.6 cytochrome C oxidase Cbb3 compare
AO353_06850 -0.9 -3.2 MFS transporter compare
AO353_17445 -0.9 -2.3 hypothetical protein compare
AO353_25165 -0.9 -3.5 ATP-NAD kinase compare
AO353_13080 -0.9 -4.7 thiosulfate sulfurtransferase compare
AO353_09250 -0.9 -1.9 exodeoxyribonuclease III compare
AO353_23520 -0.9 -3.6 muconolactone delta-isomerase compare
AO353_05140 -0.9 -4.3 outer membrane lipid asymmetry maintenance protein MlaD compare
AO353_03595 -0.9 -2.2 hypothetical protein compare
AO353_21635 -0.9 -2.3 cobalamin biosynthesis protein CobE compare
AO353_09905 -0.8 -4.6 phosphate-binding protein compare
AO353_22925 -0.8 -5.7 (Fe-S)-binding protein compare
AO353_13690 -0.8 -6.6 thiol:disulfide interchange protein compare
AO353_05150 -0.8 -3.4 ABC transporter ATP-binding protein compare
AO353_03710 -0.8 -1.9 formyltetrahydrofolate deformylase compare
AO353_12345 -0.8 -1.4 twin-arginine protein translocation system subunit TatC compare
AO353_03585 -0.8 -2.2 ATP-dependent DNA helicase RuvA compare
AO353_20630 -0.8 -4.1 SAM-dependent methyltransferase compare
AO353_15785 -0.8 -4.7 S-adenosylmethionine:tRNA ribosyltransferase-isomerase compare
AO353_05145 -0.8 -3.6 ABC transporter permease compare
AO353_15725 -0.8 -2.6 hypothetical protein compare
AO353_16365 -0.8 -6.7 multidrug transporter AcrB compare
AO353_08485 -0.8 -5.9 threonine dehydratase compare


Specific Phenotypes

For 3 genes in this experiment

For nitrogen source L-Glutamine in Pseudomonas fluorescens FW300-N2E3

For nitrogen source L-Glutamine across organisms