Experiment set6IT084 for Pseudomonas fluorescens FW300-N2E3

Compare to:

L-Glutamic acid monopotassium salt monohydrate nitrogen source

200 most important genes:

  gene name fitness t score description  
AO353_12090 -4.5 -3.1 imidazole glycerol phosphate synthase subunit HisF compare
AO353_20620 -4.4 -7.9 isopropylmalate isomerase compare
AO353_02070 -4.3 -7.2 prephenate dehydratase compare
AO353_05115 -4.3 -10.6 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
AO353_20540 -4.2 -8.8 aromatic amino acid aminotransferase compare
AO353_10670 -4.1 -7.4 shikimate dehydrogenase compare
AO353_08185 -4.0 -10.4 methionine biosynthesis protein MetW compare
AO353_20625 -4.0 -4.7 3-isopropylmalate dehydratase compare
AO353_20695 -4.0 -8.0 O-succinylhomoserine sulfhydrylase compare
AO353_00495 -4.0 -3.8 DNA topoisomerase I compare
AO353_07220 -3.9 -8.4 anthranilate synthase compare
AO353_13070 -3.9 -7.8 phosphoserine phosphatase compare
AO353_08180 -3.8 -14.2 homoserine O-acetyltransferase compare
AO353_12070 -3.7 -9.3 imidazoleglycerol-phosphate dehydratase compare
AO353_08475 -3.7 -9.9 phosphoserine phosphatase compare
AO353_20665 -3.7 -11.2 N-(5'-phosphoribosyl)anthranilate isomerase compare
AO353_12085 -3.7 -8.3 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
AO353_07230 -3.7 -17.0 anthranilate synthase compare
AO353_08345 -3.7 -9.5 dihydroxy-acid dehydratase compare
AO353_20635 -3.6 -13.4 3-isopropylmalate dehydrogenase compare
AO353_09240 -3.6 -2.5 acetylglutamate kinase compare
AO353_14505 -3.4 -13.5 ketol-acid reductoisomerase compare
AO353_07215 -3.4 -8.7 anthranilate phosphoribosyltransferase compare
AO353_02640 -3.4 -2.8 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
AO353_19060 -3.3 -6.0 CysB family transcriptional regulator compare
AO353_13605 -3.3 -11.7 oxidoreductase compare
AO353_08685 -3.3 -10.1 N-acetylglutamate synthase compare
AO353_10710 -3.3 -5.8 tryptophan synthase subunit beta compare
AO353_07210 -3.2 -7.2 indole-3-glycerol-phosphate synthase compare
AO353_05110 -3.2 -12.4 histidinol dehydrogenase compare
AO353_04155 -3.2 -12.8 ornithine carbamoyltransferase compare
AO353_13165 -3.2 -7.0 ATP phosphoribosyltransferase regulatory subunit compare
AO353_05105 -3.2 -12.4 histidinol-phosphate aminotransferase compare
AO353_12360 -3.1 -10.6 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
AO353_14495 -3.1 -12.0 acetolactate synthase 3 catalytic subunit compare
AO353_14500 -3.1 -7.9 acetolactate synthase 3 regulatory subunit compare
AO353_02595 -3.0 -4.6 cobalamin synthase compare
AO353_12075 -3.0 -10.3 imidazole glycerol phosphate synthase subunit HisH compare
AO353_01375 -2.9 -7.5 phosphate acyltransferase compare
AO353_08015 -2.9 -7.9 5,10-methylenetetrahydrofolate reductase compare
AO353_03585 -2.9 -4.3 ATP-dependent DNA helicase RuvA compare
AO353_09000 -2.9 -6.6 argininosuccinate lyase compare
AO353_15925 -2.8 -11.4 2-isopropylmalate synthase compare
AO353_02075 -2.8 -12.3 3-phosphoserine/phosphohydroxythreonine aminotransferase compare
AO353_07525 -2.8 -14.5 biotin synthase compare
AO353_14220 -2.8 -2.7 ribosomal large subunit pseudouridine synthase D compare
AO353_12460 -2.8 -10.0 malate dehydrogenase compare
AO353_07355 -2.8 -5.9 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase compare
AO353_03360 -2.8 -9.7 glucose-6-phosphate dehydrogenase compare
AO353_08510 -2.7 -5.5 3-phosphoglycerate dehydrogenase compare
AO353_04105 -2.7 -10.0 argininosuccinate synthase compare
AO353_02685 -2.6 -4.3 phosphoribosylglycinamide formyltransferase compare
AO353_07155 -2.6 -7.8 N-acetyl-gamma-glutamyl-phosphate reductase compare
AO353_08165 -2.6 -3.9 pyrroline-5-carboxylate reductase compare
AO353_09285 -2.6 -10.2 reactive intermediate/imine deaminase compare
AO353_09890 -2.6 -6.3 phosphate ABC transporter ATP-binding protein compare
AO353_22800 -2.5 -4.1 sulfite reductase compare
AO353_06495 -2.5 -6.5 gamma-glutamyl phosphate reductase compare
AO353_12115 -2.5 -3.3 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
AO353_13610 -2.4 -5.8 precorrin isomerase compare
AO353_06155 -2.4 -8.4 copper-transporting ATPase compare
AO353_08130 -2.4 -3.9 uracil phosphoribosyltransferase compare
AO353_00310 -2.4 -10.2 transaldolase compare
AO353_14775 -2.3 -7.5 hypothetical protein compare
AO353_10510 -2.3 -2.2 benzoate transporter compare
AO353_00650 -2.3 -4.0 cytochrome biogenesis protein compare
AO353_12345 -2.3 -2.2 twin-arginine protein translocation system subunit TatC compare
AO353_00825 -2.3 -5.5 porin compare
AO353_12365 -2.3 -3.4 phosphoribosyl-AMP cyclohydrolase compare
AO353_07515 -2.2 -3.0 transporter compare
AO353_12500 -2.2 -2.1 shikimate kinase compare
AO353_03715 -2.2 -3.5 H-NS histone compare
AO353_16940 -2.2 -6.2 deoxycytidine triphosphate deaminase compare
AO353_05690 -2.1 -3.8 SsrA-binding protein compare
AO353_10705 -2.1 -5.1 tryptophan synthase subunit alpha compare
AO353_13160 -2.1 -2.8 membrane protease HflC compare
AO353_14400 -2.1 -4.3 Fis family transcriptional regulator compare
AO353_21660 -2.1 -12.0 cobalamin biosynthesis protein CobN compare
AO353_02635 -2.1 -8.6 cobyrinic acid a,c-diamide synthase compare
AO353_02610 -2.0 -7.5 adenosylcobinamide kinase compare
AO353_07645 -2.0 -2.7 sarcosine oxidase subunit gamma compare
AO353_21630 -2.0 -3.7 precorrin-4 C11-methyltransferase compare
AO353_21665 -2.0 -4.4 magnesium chelatase compare
AO353_02615 -2.0 -8.3 cobyric acid synthase compare
AO353_13615 -1.9 -12.0 precorrin-2 C20-methyltransferase compare
AO353_08880 -1.9 -3.1 exopolyphosphatase compare
AO353_02625 -1.9 -9.7 cobalamin biosynthesis protein CobD compare
AO353_16210 -1.9 -10.6 XRE family transcriptional regulator compare
AO353_14115 -1.9 -7.2 gamma-glutamyl kinase compare
AO353_13620 -1.9 -9.9 precorrin-3B C17-methyltransferase compare
AO353_07520 -1.8 -11.3 8-amino-7-oxononanoate synthase compare
AO353_10495 -1.8 -4.5 serine hydroxymethyltransferase compare
AO353_04355 -1.8 -2.9 homoserine dehydrogenase compare
AO353_08045 -1.8 -11.7 adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
AO353_05135 -1.8 -8.3 toluene tolerance protein compare
AO353_12105 -1.7 -6.5 peptidase S41 compare
AO353_08780 -1.7 -7.4 5-formyltetrahydrofolate cyclo-ligase compare
AO353_03795 -1.7 -4.3 fumarate hydratase compare
AO353_13685 -1.7 -4.7 3-dehydroquinate dehydratase compare
AO353_15250 -1.7 -3.6 cytochrome B compare
AO353_05130 -1.6 -2.2 anti-anti-sigma factor compare
AO353_15480 -1.6 -2.8 hypothetical protein compare
AO353_09040 -1.6 -1.7 diaminopimelate epimerase compare
AO353_13640 -1.6 -4.8 histidine kinase compare
AO353_26945 -1.6 -3.0 transcriptional regulator compare
AO353_12650 -1.6 -1.7 hypothetical protein compare
AO353_23620 -1.5 -2.8 hypothetical protein compare
AO353_20175 -1.5 -3.5 ATP-dependent Clp protease proteolytic subunit compare
AO353_18715 -1.5 -1.8 histidine kinase compare
AO353_07510 -1.5 -7.5 malonyl-[acyl-carrier protein] O-methyltransferase BioC compare
AO353_00330 -1.5 -7.4 hypothetical protein compare
AO353_03580 -1.5 -3.5 ATP-dependent DNA helicase RuvB compare
AO353_02975 -1.5 -3.4 aspartate kinase compare
AO353_02250 -1.5 -3.5 chorismate synthase compare
AO353_06045 -1.4 -6.4 exodeoxyribonuclease V subunit beta compare
AO353_02720 -1.4 -4.7 cysteine synthase compare
AO353_13600 -1.4 -3.3 precorrin-6Y C5,15-methyltransferase compare
AO353_18890 -1.4 -4.7 cytochrome C compare
AO353_15185 -1.4 -4.7 ATPase compare
AO353_17785 -1.4 -3.1 hypothetical protein compare
AO353_02605 -1.4 -5.4 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
AO353_05150 -1.4 -4.7 ABC transporter ATP-binding protein compare
AO353_06050 -1.4 -6.0 exodeoxyribonuclease V subunit gamma compare
AO353_13245 -1.4 -6.6 hypothetical protein compare
AO353_23495 -1.3 -2.3 SAM-dependent methyltransferase compare
AO353_19145 -1.3 -4.1 protease HtpX compare
AO353_04565 -1.3 -5.3 nucleoid-associated protein compare
AO353_03420 -1.3 -3.6 phosphogluconate dehydratase compare
AO353_15725 -1.3 -4.2 hypothetical protein compare
AO353_02465 -1.3 -2.0 hypothetical protein compare
AO353_12935 -1.3 -3.2 glycosyltransferase compare
AO353_11770 -1.3 -2.1 molecular chaperone Hsp33 compare
AO353_24415 -1.3 -2.4 glutamine ABC transporter ATP-binding protein compare
AO353_22920 -1.3 -4.3 GntR family transcriptional regulator compare
AO353_22025 -1.3 -1.8 iron-sulfur cluster repair di-iron protein compare
AO353_10455 -1.3 -1.9 tRNA modification GTPase MnmE compare
AO353_14150 -1.2 -1.6 peptidylprolyl isomerase compare
AO353_06160 -1.2 -4.5 transcriptional regulator compare
AO353_24340 -1.2 -1.7 TetR family transcriptional regulator compare
AO353_10445 -1.2 -2.0 tRNA uridine 5-carboxymethylaminomethyl modification protein compare
AO353_12690 -1.2 -1.3 acyl carrier protein compare
AO353_06710 -1.2 -1.8 riboflavin synthase subunit alpha compare
AO353_21615 -1.2 -7.5 methionine synthase compare
AO353_21625 -1.2 -2.2 Fe/S biogenesis protein NfuA compare
AO353_03615 -1.2 -2.9 cold-shock protein compare
AO353_12710 -1.2 -1.8 thioredoxin compare
AO353_08350 -1.2 -6.2 hypothetical protein compare
AO353_02620 -1.2 -3.2 threonine-phosphate decarboxylase compare
AO353_05420 -1.2 -1.5 peptide chain release factor 3 compare
AO353_29340 -1.2 -2.5 transporter compare
AO353_02885 -1.2 -2.6 flagellar biosynthesis protein FlgN compare
AO353_14595 -1.2 -6.3 carbonate dehydratase compare
AO353_20095 -1.1 -4.3 histidine kinase compare
AO353_18960 -1.1 -2.2 terminase compare
AO353_13590 -1.1 -3.9 cobalt-precorrin-6X reductase compare
AO353_01685 -1.1 -1.9 hypothetical protein compare
AO353_03670 -1.1 -3.1 ornithine acetyltransferase compare
AO353_21455 -1.1 -1.5 cation:proton antiporter compare
AO353_21655 -1.1 -2.7 cobalamin biosynthesis protein CobW compare
AO353_04055 -1.1 -1.0 methionine--tRNA ligase compare
AO353_05075 -1.1 -6.3 adenylylsulfate kinase compare
AO353_04520 -1.1 -3.9 elongation factor 4 compare
AO353_10025 -1.1 -7.9 pyruvate carboxylase subunit B compare
AO353_20865 -1.1 -2.3 cold-shock protein compare
AO353_23405 -1.1 -2.2 hypothetical protein compare
AO353_13220 -1.1 -5.4 hypothetical protein compare
AO353_05140 -1.1 -5.7 outer membrane lipid asymmetry maintenance protein MlaD compare
AO353_05080 -1.0 -6.6 sulfate adenylyltransferase compare
AO353_16805 -1.0 -4.5 recombinase RecA compare
AO353_04325 -1.0 -1.9 hypothetical protein compare
AO353_12510 -1.0 -6.6 cell division protein compare
AO353_13080 -1.0 -5.6 thiosulfate sulfurtransferase compare
AO353_03590 -1.0 -2.3 crossover junction endodeoxyribonuclease RuvC compare
AO353_14740 -1.0 -2.8 GTP-binding protein compare
AO353_19435 -1.0 -2.5 TetR family transcriptional regulator compare
AO353_08485 -1.0 -7.3 threonine dehydratase compare
AO353_14420 -1.0 -3.0 molecular chaperone DnaK compare
AO353_11780 -1.0 -2.6 hypothetical protein compare
AO353_20630 -1.0 -4.8 SAM-dependent methyltransferase compare
AO353_13225 -1.0 -2.8 50S ribosomal protein L9 compare
AO353_24120 -1.0 -1.9 hypothetical protein compare
AO353_12930 -1.0 -2.7 GlcNAc-PI de-N-acetylase compare
AO353_06040 -1.0 -2.5 exodeoxyribonuclease V subunit alpha compare
AO353_07505 -1.0 -4.4 dethiobiotin synthetase compare
AO353_27650 -1.0 -3.3 cell division protein FtsK compare
AO353_03100 -0.9 -1.5 XRE family transcriptional regulator compare
AO353_09030 -0.9 -1.6 iron donor protein CyaY compare
AO353_07325 -0.9 -1.6 diadenosine tetraphosphatase compare
AO353_16360 -0.9 -4.7 RND transporter compare
AO353_21635 -0.9 -3.0 cobalamin biosynthesis protein CobE compare
AO353_12535 -0.9 -2.8 hypothetical protein compare
AO353_00750 -0.9 -2.9 GntR family transcriptional regulator compare
AO353_09905 -0.9 -4.7 phosphate-binding protein compare
AO353_28485 -0.9 -1.7 LysR family transcriptional regulator compare
AO353_12665 -0.9 -1.4 glycosyl transferase compare
AO353_03020 -0.9 -4.5 arginine N-succinyltransferase compare
AO353_02600 -0.9 -2.1 alpha-ribazole phosphatase compare
AO353_18780 -0.9 -4.0 cobyrinic acid a,c-diamide synthase compare
AO353_24130 -0.9 -2.2 hypothetical protein compare
AO353_00610 -0.9 -1.0 cytochrome C oxidase Cbb3 compare


Specific Phenotypes

None in this experiment

For Pseudomonas fluorescens FW300-N2E3 in nitrogen source experiments

For nitrogen source L-Glutamic acid monopotassium salt monohydrate across organisms