Experiment set6IT083 for Cupriavidus basilensis FW507-4G11

Compare to:

R2A with Nickel (II) chloride hexahydrate 0.5 mM

200 most important genes:

  gene name fitness t score description  
RR42_RS02030 -7.3 -3.4 membrane protein compare
RR42_RS06255 -6.5 -3.1 lipoprotein compare
RR42_RS11770 -6.2 -2.9 cyclase compare
RR42_RS15890 -5.8 -8.8 heme biosynthesis protein HemY compare
RR42_RS15455 -5.6 -6.7 membrane protein compare
RR42_RS02810 -5.5 -3.1 acyl-phosphate glycerol 3-phosphate acyltransferase compare
RR42_RS15740 -5.5 -2.6 hypothetical protein compare
RR42_RS18850 -5.0 -3.7 preprotein translocase subunit TatC compare
RR42_RS15470 -4.7 -1.8 biopolymer transporter ExbD compare
RR42_RS21220 -4.5 -2.0 iron transporter FeoB compare
RR42_RS17105 -4.4 -10.5 Clp protease ClpX compare
RR42_RS22920 -4.3 -2.8 hypothetical protein compare
RR42_RS33255 -4.2 -2.1 protein-tyrosine phosphatase compare
RR42_RS01980 -4.2 -12.1 peptidase M16 compare
RR42_RS02775 -4.2 -2.2 molecular chaperone SurA compare
RR42_RS17885 -4.2 -4.5 ABC transporter permease compare
RR42_RS18855 -4.2 -4.7 preprotein translocase compare
RR42_RS14790 -4.2 -7.9 cobalamin biosynthesis protein CobD compare
RR42_RS12040 -4.1 -13.5 MFS transporter compare
RR42_RS01985 -4.1 -10.3 zinc protease compare
RR42_RS06450 -4.0 -9.7 membrane protein compare
RR42_RS18840 -4.0 -5.3 2-alkenal reductase compare
RR42_RS22935 -3.9 -4.8 metal transporter compare
RR42_RS18270 -3.9 -4.7 murein transglycosylase compare
RR42_RS13935 -3.9 -3.5 hemin transporter compare
RR42_RS00715 -3.8 -3.0 ferritin compare
RR42_RS12590 -3.8 -1.5 50S ribosomal protein L9 compare
RR42_RS04325 -3.7 -4.0 membrane protein compare
RR42_RS02150 -3.6 -2.9 membrane protein compare
RR42_RS15745 -3.4 -6.5 group1 glycosyl transferase compare
RR42_RS07140 -3.4 -1.8 hypothetical protein compare
RR42_RS01820 -3.4 -7.5 peptidase S41 compare
RR42_RS22930 -3.3 -8.4 cytochrome C peroxidase conserved
RR42_RS07555 -3.3 -2.5 potassium transporter Kup compare
RR42_RS04960 -3.3 -6.1 Fe(II)-dependent oxygenase compare
RR42_RS20065 -3.3 -3.5 glycine cleavage system protein H compare
RR42_RS15800 -3.3 -3.7 aldo/keto reductase compare
RR42_RS33250 -3.3 -8.1 tyrosine protein kinase compare
RR42_RS15770 -3.3 -5.1 hypothetical protein compare
RR42_RS22925 -3.2 -4.5 RND transporter compare
RR42_RS13910 -3.2 -4.9 glutamate racemase compare
RR42_RS17690 -3.1 -7.1 3-dehydroquinate dehydratase compare
RR42_RS15790 -3.1 -9.9 aminotransferase class III compare
RR42_RS15785 -3.1 -8.1 glycosyl transferase family 28 compare
RR42_RS15710 -3.1 -6.7 LPS biosynthesis protein compare
RR42_RS02500 -3.1 -2.4 TetR family transcriptional regulator compare
RR42_RS15465 -3.1 -2.5 TonB-dependent receptor compare
RR42_RS27550 -3.0 -1.5 hypothetical protein compare
RR42_RS15895 -3.0 -7.3 uroporphyrinogen III methyltransferase compare
RR42_RS33260 -3.0 -6.6 multidrug MFS transporter compare
RR42_RS36990 -3.0 -10.9 hemolysin III compare
RR42_RS14080 -3.0 -8.9 RNA polymerase sigma factor RpoE compare
RR42_RS12580 -2.9 -2.6 phosphate transport regulator compare
RR42_RS20370 -2.9 -1.5 pterin-4-alpha-carbinolamine dehydratase compare
RR42_RS36040 -2.9 -10.8 TonB-dependent receptor compare
RR42_RS21665 -2.9 -4.8 cobalt transporter compare
RR42_RS36045 -2.8 -6.3 hypothetical protein compare
RR42_RS06585 -2.8 -13.9 GTP pyrophosphokinase compare
RR42_RS33245 -2.7 -6.5 mannose-1-phosphate guanyltransferase compare
RR42_RS33240 -2.7 -10.7 GDP-L-fucose synthase compare
RR42_RS18970 -2.7 -12.2 toluene ABC transporter ATP-binding protein compare
RR42_RS12050 -2.7 -6.1 DNA polymerase compare
RR42_RS02440 -2.7 -1.3 membrane protein compare
RR42_RS12615 -2.6 -1.6 LexA family transcriptional regulator compare
RR42_RS15775 -2.6 -3.9 N-acetylneuraminate synthase compare
RR42_RS06020 -2.5 -1.2 Fe-S cluster assembly transcriptional regulator IscR compare
RR42_RS01795 -2.5 -11.0 phosphoenolpyruvate-protein phosphotransferase compare
RR42_RS32235 -2.4 -6.1 hopanoid biosynthesis associated radical SAM protein HpnH compare
RR42_RS27945 -2.4 -5.3 RNA chaperone Hfq compare
RR42_RS25015 -2.4 -2.8 gluconolactonase compare
RR42_RS15090 -2.4 -3.7 DNA helicase compare
RR42_RS33235 -2.4 -7.3 GDP-mannose 4,6-dehydratase compare
RR42_RS33210 -2.3 -3.4 teichoic acid biosynthesis protein compare
RR42_RS18385 -2.3 -3.2 hypothetical protein compare
RR42_RS04700 -2.3 -1.1 ribonuclease G compare
RR42_RS15795 -2.3 -2.7 spore coat protein compare
RR42_RS01830 -2.2 -5.6 sulfurtransferase compare
RR42_RS18965 -2.2 -10.4 ABC transporter permease compare
RR42_RS05920 -2.2 -3.4 HrcA family transcriptional regulator compare
RR42_RS19065 -2.2 -8.7 transcriptional regulator compare
RR42_RS17865 -2.2 -6.5 N-acetyl-anhydromuranmyl-L-alanine amidase compare
RR42_RS19445 -2.2 -4.9 TetR family transcriptional regulator compare
RR42_RS08175 -2.1 -1.2 hypothetical protein compare
RR42_RS05885 -2.1 -7.5 hypothetical protein compare
RR42_RS12575 -2.1 -8.9 inorganic phosphate transporter compare
RR42_RS18960 -2.1 -10.0 ABC transporter substrate-binding protein compare
RR42_RS04300 -2.1 -3.5 nitrogen regulatory protein P-II 1 compare
RR42_RS33215 -2.1 -8.1 transferase compare
RR42_RS03145 -2.1 -8.8 peptidase M48 compare
RR42_RS00455 -2.1 -5.5 cell division inhibitor MinD compare
RR42_RS30960 -2.1 -8.5 transcriptional regulator compare
RR42_RS17235 -2.1 -5.2 poly(A) polymerase compare
RR42_RS15450 -2.0 -2.6 Tol system periplasmic component YbgF compare
RR42_RS15705 -2.0 -4.2 glycosyl transferase family 1 compare
RR42_RS15475 -2.0 -2.8 protein tolQ compare
RR42_RS15070 -2.0 -6.9 membrane protein compare
RR42_RS05890 -2.0 -8.2 glutamine-synthetase adenylyltransferase compare
RR42_RS12860 -1.9 -1.4 pseudouridine synthase compare
RR42_RS11120 -1.9 -2.8 DNA-binding protein compare
RR42_RS15755 -1.9 -2.5 acetyltransferase compare
RR42_RS13040 -1.9 -3.2 iron transporter compare
RR42_RS04015 -1.8 -1.3 RNA polymerase sigma factor compare
RR42_RS35875 -1.8 -6.6 UDP-galactose-4-epimerase compare
RR42_RS15460 -1.8 -3.1 translocation protein TolB compare
RR42_RS15735 -1.7 -8.0 pyridoxal phosphate-dependent aminotransferase compare
RR42_RS02825 -1.7 -6.7 hypothetical protein compare
RR42_RS14495 -1.7 -5.2 hypothetical protein compare
RR42_RS25650 -1.7 -1.8 hypothetical protein compare
RR42_RS26900 -1.7 -2.2 enoyl-CoA hydratase compare
RR42_RS06270 -1.7 -5.3 cupin compare
RR42_RS06000 -1.7 -1.5 antibiotic biosynthesis monooxygenase compare
RR42_RS19885 -1.6 -1.4 aminoglycoside transporter compare
RR42_RS13945 -1.6 -4.1 hypothetical protein compare
RR42_RS15640 -1.6 -1.0 hypothetical protein compare
RR42_RS17675 -1.5 -8.9 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase compare
RR42_RS29315 -1.5 -6.8 AcrR family transcriptional regulator compare
RR42_RS07885 -1.5 -4.6 chemotaxis protein CheY compare
RR42_RS13365 -1.5 -1.1 peptidase P60 compare
RR42_RS04320 -1.5 -4.0 cell division protein FtsK compare
RR42_RS32245 -1.5 -7.9 RND transporter compare
RR42_RS35220 -1.5 -1.8 peptide ABC transporter ATP-binding protein compare
RR42_RS11790 -1.5 -7.6 phosphoenolpyruvate synthase compare
RR42_RS00460 -1.5 -3.5 septum formation inhibitor compare
RR42_RS32590 -1.5 -1.4 cytochrome o ubiquinol oxidase subunit III compare
RR42_RS18670 -1.4 -4.1 metal-dependent hydrolase compare
RR42_RS24605 -1.4 -6.7 TetR family transcriptional regulator compare
RR42_RS14055 -1.4 -2.8 elongation factor 4 compare
RR42_RS31040 -1.4 -5.0 hypothetical protein compare
RR42_RS13360 -1.4 -4.3 esterase compare
RR42_RS13905 -1.4 -3.1 fumarate hydratase compare
RR42_RS15715 -1.4 -4.6 glycosyl transferase compare
RR42_RS11180 -1.4 -1.8 peptidylprolyl isomerase compare
RR42_RS06345 -1.4 -3.2 hypothetical protein compare
RR42_RS01630 -1.4 -1.1 branched-chain amino acid ABC transporter ATP-binding protein compare
RR42_RS02750 -1.4 -5.3 mannose-1-phosphate guanylyltransferase compare
RR42_RS01420 -1.3 -1.9 2', 3'-cyclic nucleotide 2'-phosphodiesterase compare
RR42_RS17110 -1.3 -4.7 ATP-dependent Clp protease adapter protein ClpS compare
RR42_RS02405 -1.3 -5.0 membrane protein compare
RR42_RS02705 -1.3 -1.9 Holliday junction DNA helicase RuvA compare
RR42_RS02505 -1.3 -6.7 acyl-CoA dehydrogenase compare
RR42_RS18925 -1.3 -4.2 UDP-N-acetylglucosamine 1-carboxyvinyltransferase compare
RR42_RS01260 -1.3 -6.5 lauroyl acyltransferase compare
RR42_RS20060 -1.3 -4.2 glycine cleavage system protein T compare
RR42_RS11280 -1.3 -1.5 phenylacetic acid degradation protein compare
RR42_RS23110 -1.3 -1.5 isochorismatase compare
RR42_RS32240 -1.3 -4.7 ABC transporter compare
RR42_RS09015 -1.2 -2.1 trigger factor compare
RR42_RS19085 -1.2 -1.1 cytochrome C biogenesis protein ResB compare
RR42_RS14480 -1.2 -3.3 hypothetical protein compare
RR42_RS06870 -1.2 -1.7 hypothetical protein compare
RR42_RS30735 -1.2 -1.5 tRNA-Met compare
RR42_RS33425 -1.2 -2.7 cobalt-zinc-cadmium resistance protein compare
RR42_RS07605 -1.2 -4.0 poly-beta-hydroxybutyrate polymerase compare
RR42_RS17390 -1.2 -4.0 ATP-dependent DNA helicase RecG compare
RR42_RS08210 -1.2 -1.0 hypothetical protein compare
RR42_RS24790 -1.2 -1.3 LysR family transcriptional regulator compare
RR42_RS01990 -1.2 -3.2 methyltransferase compare
RR42_RS13450 -1.2 -5.2 PhoU family transcriptional regulator compare
RR42_RS17045 -1.2 -4.1 SAM-dependent methyltransferase compare
RR42_RS07615 -1.2 -1.3 3-ketoacyl-ACP reductase compare
RR42_RS23380 -1.2 -3.0 flagellar basal body protein FliL compare
RR42_RS15825 -1.2 -6.4 capsular biosynthesis protein compare
RR42_RS32225 -1.2 -5.0 NAD-dependent dehydratase compare
RR42_RS21150 -1.2 -1.8 hypothetical protein compare
RR42_RS34680 -1.2 -1.3 short-chain dehydrogenase compare
RR42_RS21000 -1.2 -1.6 glycosyl transferase compare
RR42_RS02310 -1.2 -2.3 NADPH-dependent 7-cyano-7-deazaguanine reductase compare
RR42_RS36945 -1.2 -4.6 mechanosensitive ion channel protein MscS compare
RR42_RS20205 -1.2 -1.5 chromosome partitioning protein compare
RR42_RS13675 -1.2 -2.2 short-chain dehydrogenase compare
RR42_RS03035 -1.2 -0.9 membrane protein compare
RR42_RS32260 -1.1 -7.2 squalene--hopene cyclase compare
RR42_RS05420 -1.1 -3.1 membrane protein compare
RR42_RS31910 -1.1 -1.5 acyl-CoA dehydrogenase compare
RR42_RS18900 -1.1 -6.0 membrane protein compare
RR42_RS36335 -1.1 -1.7 enoyl-CoA hydratase compare
RR42_RS28785 -1.1 -6.8 molecular chaperone DnaK compare
RR42_RS03415 -1.1 -1.8 N-acetylmuramoyl-L-alanine amidase compare
RR42_RS26180 -1.1 -2.1 hypothetical protein compare
RR42_RS12015 -1.1 -1.5 dihydrolipoamide acyltransferase compare
RR42_RS13125 -1.1 -1.9 pyrrolo-quinoline quinone compare
RR42_RS01385 -1.1 -1.9 5,10-methylenetetrahydrofolate reductase compare
RR42_RS15730 -1.1 -3.1 sugar transferase compare
RR42_RS17590 -1.1 -1.5 16S rRNA methyltransferase compare
RR42_RS28780 -1.1 -5.5 molecular chaperone DnaK compare
RR42_RS14930 -1.1 -2.0 biopolymer transporter ExbD compare
RR42_RS24550 -1.1 -1.2 hypothetical protein compare
RR42_RS33850 -1.1 -1.9 hypothetical protein compare
RR42_RS17050 -1.1 -3.0 phosphoribosylglycinamide formyltransferase compare
RR42_RS36265 -1.1 -4.8 esterase compare
RR42_RS16220 -1.1 -0.9 DNA polymerase III subunit chi compare
RR42_RS27010 -1.1 -4.8 D-3-phosphoglycerate dehydrogenase compare
RR42_RS01185 -1.1 -5.8 muropeptide transporter compare
RR42_RS26855 -1.0 -5.3 glucan biosynthesis protein G compare
RR42_RS21830 -1.0 -2.6 transcriptional regulator compare
RR42_RS14235 -1.0 -1.0 hypothetical protein compare
RR42_RS01690 -1.0 -2.4 ferredoxin compare
RR42_RS36110 -1.0 -3.5 membrane protein compare
RR42_RS15750 -1.0 -3.2 hypothetical protein compare
RR42_RS22435 -1.0 -4.6 membrane protein compare


Specific Phenotypes

For 36 genes in this experiment

For stress Nickel (II) chloride hexahydrate in Cupriavidus basilensis FW507-4G11

For stress Nickel (II) chloride hexahydrate across organisms