Experiment set6IT081 for Pseudomonas fluorescens FW300-N2E3

Compare to:

L-Arginine nitrogen source

200 most important genes:

  gene name fitness t score description  
AO353_03005 -4.5 -6.1 succinylarginine dihydrolase compare
AO353_12090 -4.4 -3.0 imidazole glycerol phosphate synthase subunit HisF compare
AO353_20695 -4.2 -7.0 O-succinylhomoserine sulfhydrylase compare
AO353_02995 -4.2 -9.0 succinylglutamate desuccinylase compare
AO353_07230 -4.2 -14.5 anthranilate synthase compare
AO353_13165 -4.1 -4.9 ATP phosphoribosyltransferase regulatory subunit compare
AO353_03025 -4.0 -6.1 acetylornithine aminotransferase compare
AO353_20625 -4.0 -4.7 3-isopropylmalate dehydratase compare
AO353_13070 -4.0 -6.1 phosphoserine phosphatase compare
AO353_14505 -4.0 -10.3 ketol-acid reductoisomerase compare
AO353_12085 -4.0 -8.0 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
AO353_08185 -3.9 -10.8 methionine biosynthesis protein MetW compare
AO353_03015 -3.9 -4.7 arginine N-succinyltransferase compare
AO353_20635 -3.9 -11.3 3-isopropylmalate dehydrogenase compare
AO353_07210 -3.9 -6.0 indole-3-glycerol-phosphate synthase compare
AO353_12070 -3.9 -7.9 imidazoleglycerol-phosphate dehydratase compare
AO353_20620 -3.9 -8.3 isopropylmalate isomerase compare
AO353_02070 -3.9 -7.5 prephenate dehydratase compare
AO353_07220 -3.9 -8.3 anthranilate synthase compare
AO353_20540 -3.9 -8.6 aromatic amino acid aminotransferase compare
AO353_08345 -3.8 -8.5 dihydroxy-acid dehydratase compare
AO353_20665 -3.8 -10.2 N-(5'-phosphoribosyl)anthranilate isomerase compare
AO353_05115 -3.7 -11.7 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
AO353_10710 -3.7 -3.6 tryptophan synthase subunit beta compare
AO353_08180 -3.7 -13.2 homoserine O-acetyltransferase compare
AO353_19060 -3.6 -5.5 CysB family transcriptional regulator compare
AO353_00310 -3.6 -9.2 transaldolase compare
AO353_05075 -3.6 -12.0 adenylylsulfate kinase compare
AO353_00495 -3.6 -3.4 DNA topoisomerase I compare
AO353_12365 -3.5 -4.8 phosphoribosyl-AMP cyclohydrolase compare
AO353_08475 -3.4 -9.9 phosphoserine phosphatase compare
AO353_22800 -3.4 -4.0 sulfite reductase compare
AO353_14500 -3.4 -7.2 acetolactate synthase 3 regulatory subunit compare
AO353_05110 -3.4 -11.9 histidinol dehydrogenase compare
AO353_10670 -3.3 -8.0 shikimate dehydrogenase compare
AO353_03360 -3.3 -9.6 glucose-6-phosphate dehydrogenase compare
AO353_03010 -3.1 -6.3 succinylglutamate-semialdehyde dehydrogenase compare
AO353_05080 -3.1 -12.6 sulfate adenylyltransferase compare
AO353_12075 -3.1 -9.6 imidazole glycerol phosphate synthase subunit HisH compare
AO353_14400 -3.1 -2.1 Fis family transcriptional regulator compare
AO353_07215 -3.1 -8.9 anthranilate phosphoribosyltransferase compare
AO353_08015 -3.0 -7.6 5,10-methylenetetrahydrofolate reductase compare
AO353_09285 -3.0 -12.0 reactive intermediate/imine deaminase compare
AO353_12360 -3.0 -10.4 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
AO353_05105 -3.0 -11.7 histidinol-phosphate aminotransferase compare
AO353_14495 -3.0 -11.5 acetolactate synthase 3 catalytic subunit compare
AO353_13100 -2.9 -2.8 GTPase RsgA compare
AO353_12500 -2.9 -2.0 shikimate kinase compare
AO353_07525 -2.9 -14.8 biotin synthase compare
AO353_14115 -2.8 -7.4 gamma-glutamyl kinase compare
AO353_02075 -2.8 -11.6 3-phosphoserine/phosphohydroxythreonine aminotransferase compare
AO353_15925 -2.8 -11.2 2-isopropylmalate synthase compare
AO353_03415 -2.7 -6.8 glucokinase compare
AO353_08510 -2.6 -5.3 3-phosphoglycerate dehydrogenase compare
AO353_08885 -2.6 -16.8 polyphosphate kinase compare
AO353_12115 -2.6 -3.0 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
AO353_01375 -2.6 -7.4 phosphate acyltransferase compare
AO353_13610 -2.6 -5.4 precorrin isomerase compare
AO353_03410 -2.5 -3.3 chemotaxis protein CheY compare
AO353_08780 -2.4 -8.6 5-formyltetrahydrofolate cyclo-ligase compare
AO353_10705 -2.4 -5.1 tryptophan synthase subunit alpha compare
AO353_21625 -2.4 -3.2 Fe/S biogenesis protein NfuA compare
AO353_20175 -2.4 -3.6 ATP-dependent Clp protease proteolytic subunit compare
AO353_11730 -2.4 -10.8 glutamate--cysteine ligase compare
AO353_16210 -2.4 -13.0 XRE family transcriptional regulator compare
AO353_10455 -2.3 -2.2 tRNA modification GTPase MnmE compare
AO353_13605 -2.3 -10.1 oxidoreductase compare
AO353_00825 -2.3 -5.2 porin compare
AO353_06155 -2.3 -9.2 copper-transporting ATPase compare
AO353_14595 -2.3 -9.9 carbonate dehydratase compare
AO353_08110 -2.2 -7.2 glutathione synthetase compare
AO353_16940 -2.2 -6.0 deoxycytidine triphosphate deaminase compare
AO353_10035 -2.2 -7.3 LysR family transcriptional regulator compare
AO353_06495 -2.2 -6.1 gamma-glutamyl phosphate reductase compare
AO353_10495 -2.1 -4.5 serine hydroxymethyltransferase compare
AO353_14420 -2.1 -4.0 molecular chaperone DnaK compare
AO353_10025 -2.1 -12.2 pyruvate carboxylase subunit B compare
AO353_23495 -2.1 -3.4 SAM-dependent methyltransferase compare
AO353_02600 -2.1 -2.8 alpha-ribazole phosphatase compare
AO353_08165 -2.1 -3.9 pyrroline-5-carboxylate reductase compare
AO353_08045 -2.1 -12.6 adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
AO353_07355 -2.1 -6.4 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase compare
AO353_19750 -2.1 -3.4 diaminopimelate epimerase compare
AO353_10030 -2.1 -10.7 pyruvate carboxylase subunit A compare
AO353_12510 -2.0 -10.3 cell division protein compare
AO353_14775 -1.9 -6.7 hypothetical protein compare
AO353_15250 -1.9 -3.8 cytochrome B compare
AO353_13140 -1.9 -6.2 tRNA dimethylallyltransferase compare
AO353_07505 -1.9 -8.3 dethiobiotin synthetase compare
AO353_02720 -1.9 -5.3 cysteine synthase compare
AO353_07520 -1.8 -10.8 8-amino-7-oxononanoate synthase compare
AO353_21630 -1.8 -3.4 precorrin-4 C11-methyltransferase compare
AO353_09890 -1.8 -4.8 phosphate ABC transporter ATP-binding protein compare
AO353_14370 -1.8 -6.6 glucose-6-phosphate isomerase compare
AO353_00515 -1.8 -4.0 hypothetical protein compare
AO353_11770 -1.8 -2.3 molecular chaperone Hsp33 compare
AO353_20095 -1.8 -5.3 histidine kinase compare
AO353_02975 -1.8 -3.4 aspartate kinase compare
AO353_02710 -1.7 -9.7 (p)ppGpp synthetase compare
AO353_19145 -1.7 -4.2 protease HtpX compare
AO353_12515 -1.7 -13.0 glutamate synthase compare
AO353_12105 -1.7 -6.2 peptidase S41 compare
AO353_07510 -1.6 -8.6 malonyl-[acyl-carrier protein] O-methyltransferase BioC compare
AO353_02250 -1.6 -3.4 chorismate synthase compare
AO353_02685 -1.6 -3.5 phosphoribosylglycinamide formyltransferase compare
AO353_06040 -1.6 -3.1 exodeoxyribonuclease V subunit alpha compare
AO353_07315 -1.6 -2.7 rRNA methyltransferase compare
AO353_00975 -1.6 -4.0 hypothetical protein compare
AO353_03045 -1.5 -8.6 ABC transporter for L-Arginine and L-Citrulline, permease component 1 (from data) conserved
AO353_13160 -1.5 -2.4 membrane protease HflC compare
AO353_13620 -1.5 -8.8 precorrin-3B C17-methyltransferase compare
AO353_03035 -1.5 -4.3 AraC family transcriptional regulator compare
AO353_06045 -1.5 -6.5 exodeoxyribonuclease V subunit beta compare
AO353_09240 -1.5 -3.5 acetylglutamate kinase compare
AO353_03525 -1.5 -7.3 quinolinate synthase A compare
AO353_02605 -1.5 -6.2 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
AO353_18890 -1.5 -4.6 cytochrome C compare
AO353_07515 -1.5 -1.7 transporter compare
AO353_03020 -1.5 -6.1 arginine N-succinyltransferase compare
AO353_02610 -1.5 -5.9 adenosylcobinamide kinase compare
AO353_12345 -1.5 -2.1 twin-arginine protein translocation system subunit TatC compare
AO353_05130 -1.5 -1.9 anti-anti-sigma factor compare
AO353_12520 -1.4 -7.9 glutamate synthase compare
AO353_02940 -1.4 -2.6 DNA-binding protein compare
AO353_19020 -1.4 -2.6 hypothetical protein compare
AO353_03715 -1.4 -2.6 H-NS histone compare
AO353_13200 -1.4 -8.5 exoribonuclease R compare
AO353_05150 -1.4 -4.4 ABC transporter ATP-binding protein compare
AO353_11340 -1.4 -1.7 MarR family transcriptional regulator compare
AO353_05520 -1.4 -4.3 nicotinate-nucleotide pyrophosphorylase compare
AO353_21455 -1.4 -1.7 cation:proton antiporter compare
AO353_10430 -1.4 -3.0 chromosome partitioning protein ParB compare
AO353_17620 -1.3 -10.2 L-aspartate oxidase compare
AO353_05690 -1.3 -3.1 SsrA-binding protein compare
AO353_22920 -1.3 -4.5 GntR family transcriptional regulator compare
AO353_08880 -1.3 -2.5 exopolyphosphatase compare
AO353_03425 -1.3 -6.9 glyceraldehyde-3-phosphate dehydrogenase compare
AO353_19770 -1.3 -2.4 peptidase compare
AO353_21665 -1.3 -3.8 magnesium chelatase compare
AO353_11915 -1.3 -6.3 agmatine deiminase compare
AO353_21655 -1.3 -2.6 cobalamin biosynthesis protein CobW compare
AO353_03040 -1.3 -5.8 ABC transporter for L-Arginine and L-Citrulline, ATPase component (from data) conserved
AO353_18540 -1.3 -2.5 pseudouridine synthase compare
AO353_10500 -1.3 -3.4 acetylornithine aminotransferase compare
AO353_28295 -1.3 -1.8 GNAT family acetyltransferase compare
AO353_06050 -1.3 -5.6 exodeoxyribonuclease V subunit gamma compare
AO353_03050 -1.3 -5.0 ABC transporter for L-Arginine and L-Citrulline, permease component 2 (from data) compare
AO353_21660 -1.3 -7.9 cobalamin biosynthesis protein CobN compare
AO353_02595 -1.2 -2.5 cobalamin synthase compare
AO353_03775 -1.2 -6.0 pyruvate kinase compare
AO353_13615 -1.2 -8.6 precorrin-2 C20-methyltransferase compare
AO353_04565 -1.2 -4.8 nucleoid-associated protein compare
AO353_14220 -1.2 -1.6 ribosomal large subunit pseudouridine synthase D compare
AO353_13590 -1.2 -4.4 cobalt-precorrin-6X reductase compare
AO353_03420 -1.2 -3.4 phosphogluconate dehydratase compare
AO353_17165 -1.2 -2.7 ATP-dependent helicase compare
AO353_03055 -1.2 -6.4 ABC transporter for L-Arginine and L-Citrulline, periplasmic substrate-binding component (from data) compare
AO353_08485 -1.2 -8.2 threonine dehydratase compare
AO353_03590 -1.2 -2.4 crossover junction endodeoxyribonuclease RuvC compare
AO353_11850 -1.2 -3.3 3'(2'),5'-bisphosphate nucleotidase CysQ compare
AO353_02000 -1.2 -3.2 polysaccharide/polyol phosphate ABC transporter ATP-binding protein compare
AO353_15050 -1.2 -3.2 nitrate transport permease nrtB compare
AO353_13640 -1.2 -3.7 histidine kinase compare
AO353_14395 -1.2 -3.7 poly(A) polymerase compare
AO353_13225 -1.2 -2.0 50S ribosomal protein L9 compare
AO353_27650 -1.2 -3.6 cell division protein FtsK compare
AO353_02625 -1.1 -6.9 cobalamin biosynthesis protein CobD compare
AO353_21055 -1.1 -3.3 glycosyl hydrolase compare
AO353_19760 -1.1 -3.3 6-carboxy-5,6,7,8-tetrahydropterin synthase compare
AO353_14405 -1.1 -6.9 ATPase compare
AO353_12420 -1.1 -3.0 predicted FeS cluster maintenance protein (from data) compare
AO353_02060 -1.1 -2.8 3-phosphoshikimate 1-carboxyvinyltransferase compare
AO353_27415 -1.1 -2.6 hypothetical protein compare
AO353_20630 -1.1 -5.6 SAM-dependent methyltransferase compare
AO353_02640 -1.1 -1.9 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
AO353_13600 -1.1 -3.1 precorrin-6Y C5,15-methyltransferase compare
AO353_00750 -1.1 -2.8 GntR family transcriptional regulator compare
AO353_03630 -1.1 -7.1 porin compare
AO353_01355 -1.1 -5.1 3-oxoacyl-ACP synthase compare
AO353_19090 -1.0 -1.9 MarR family transcriptional regulator compare
AO353_04355 -1.0 -1.6 homoserine dehydrogenase compare
AO353_02615 -1.0 -5.1 cobyric acid synthase compare
AO353_15905 -1.0 -4.7 outer membrane protein assembly factor BamB compare
AO353_12915 -1.0 -4.5 carbamoyltransferase compare
AO353_10435 -1.0 -5.7 chromosome partitioning protein compare
AO353_00585 -1.0 -6.7 cytochrome C oxidase Cbb3 compare
AO353_20510 -1.0 -1.9 amidase compare
AO353_16805 -1.0 -4.1 recombinase RecA compare
AO353_10515 -1.0 -5.8 3-phosphoserine/phosphohydroxythreonine aminotransferase compare
AO353_06160 -1.0 -3.2 transcriptional regulator compare
AO353_03245 -1.0 -4.9 permease DsdX compare
AO353_20565 -1.0 -1.5 tRNA-Ala compare
AO353_22810 -1.0 -1.3 hypothetical protein compare
AO353_14150 -1.0 -1.4 peptidylprolyl isomerase compare
AO353_13005 -1.0 -6.7 channel protein TolC compare
AO353_09905 -1.0 -5.2 phosphate-binding protein compare
AO353_17035 -1.0 -3.3 hypothetical protein compare
AO353_26190 -1.0 -3.2 hypothetical protein compare
AO353_00600 -1.0 -4.7 cytochrome C oxidase Cbb3 compare
AO353_13720 -1.0 -7.1 arginine decarboxylase compare


Specific Phenotypes

For 2 genes in this experiment

For nitrogen source L-Arginine in Pseudomonas fluorescens FW300-N2E3

For nitrogen source L-Arginine across organisms